Bioorganic & Medicinal Chemistry Letters
Design, synthesis and evaluation of benzoisothiazolones as selective
inhibitors of PHOSPHO1
Yalda Bravo a,b, , Peter Teriete a,b, , Raveendra-Panickar Dhanya a,b, Russell Dahl a,b, Pooi San Lee a,b
,
Tina Kiffer-Moreira c, Santhi Reddy Ganji a,b, Eduard Sergienko b, Layton H. Smith b, Colin Farquharson d,
José Luis Millán c, Nicholas D. P. Cosford a,b,
⇑
a Cell Death and Survival Networks Research Program, NCI-Designated Cancer Center, Sanford-Burnham Medical Research Institute, 10901 North Torrey Pines Road, La Jolla,
CA 92037, USA
b Conrad Prebys Center for Chemical Genomics, Sanford-Burnham Medical Research Institute, 10901 North Torrey Pines Road, La Jolla, CA 92037, USA
c Sanford Children’s Health Research Center, Sanford-Burnham Medical Research Institute, 10901 North Torrey Pines Road, La Jolla, CA 92037, USA
d The Roslin Institute and R(D)SVS, University of Edinburgh, Easter Bush, Midlothian EH25 9RG, Scotland, UK
a r t i c l e i n f o
a b s t r a c t
Article history:
We report the discovery and characterization of a series of benzoisothiazolone inhibitors of PHOSPHO1, a
newly identified soluble phosphatase implicated in skeletal mineralization and soft tissue ossification
abnormalities. High-throughput screening (HTS) of a small molecule library led to the identification of
benzoisothiazolones as potent and selective inhibitors of PHOSPHO1. Critical structural requirements
for activity were determined, and the compounds were subsequently derivatized and measured for
in vitro activity and ADME parameters including metabolic stability and permeability. On the basis of
its overall profile the benzoisothiazolone analogue 2q was selected as MLPCN probe ML086.
Ó 2014 Elsevier Ltd. All rights reserved.
Received 14 May 2014
Accepted 4 July 2014
Available online 15 July 2014
Keywords:
Phosphatase
Vascular calcification
Probe compound
ML086
PHOSPHO1
PHOSPHO1 is a recently identified orphan phosphatase that
belongs to the family of halo-acid dehalogenases. It is a soluble
phosphatase with specificity for phosphoethanolamine (P-Etn)
and phosphocholine (P-Cho) present in matrix vesicles (MVs).1
PHOSPHO1 is responsible for increasing the local concentration
of inorganic phosphate (Pi) inside MVs to change the phosphate/
pyrophosphate (Pi/PPi) ratio to favor precipitation of hydroxyapa-
tite (HA) seed crystals.2 Aberrations of the Pi/PPi ratio have been
associated with numerous pathologies. Low extracellular PPi (ePPi)
production has been identified as a cause in the development of
severe medial vascular calcification (MVC) known as generalized
arterial calcification of infancy (GACI; OMIM # 20,8000)3 as well
as ossification of the posterior longitudinal ligaments of the spine
(OPLL; OMIM # 60,2475) and osteoarthritis (OA).4 In addition,
low ePPi transport manifests as ankylosing vertebral hyperostosis
(DISH; OMIM # 10,6400), chondrocalcinosis (OMIM # 605145)
and ankylosing spondylitis (AS; OMIM # 10,6300).5 On the other
hand, accumulation of ePPi results in rickets or osteomalacia,
known as hypophosphatasia (HPP; OMIM # 17,1760).6 Because of
the accumulation of ePPi, HPP patients may also display chondro-
calcinosis or calcium pyrophosphate dihydrate deposition (CPPD)
disease (OMIM # 11,8600). However, many of these conditions
have been linked to deficiencies in other transporters and phos-
phatases, most notably tissue-nonspecific alkaline phosphatase
(TNAP) that is also found in the same biological compartment.7
There is therefore a significant need to identify small molecule
compounds that can probe the function of these enzymes and pro-
vide a starting point for the development of therapeutic agents.
We previously reported the synthesis and optimization of selec-
tive small molecule inhibitors of TNAP that have been employed to
investigate the role of TNAP in vascular calcification.8 We also
disclosed the synthesis and characterization of a series of com-
pounds that inhibit phosphomannose isomerase (PMI), an enzyme
implicated in therapeutically important protein glycosylation
processes.8a,9 These small molecule probes, discovered using
high-throughput screening (HTS) and chemical optimization
through the Molecular Libraries Probe Production Centers Network
investigating the role of intracellular and extracellular phospha-
tases. The structure of the PMI inhibitor probe ML089 (1) is shown
in Figure 1. We hypothesized that, in a similar manner, it would be
possible to discover small molecule inhibitors of PHOSPHO1 that
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Corresponding author.
These authors contributed equally to this work.
0960-894X/Ó 2014 Elsevier Ltd. All rights reserved.