Inhibiting Recrystallization with Small Molecules
A R T I C L E S
moiety in a C-linked AFGP analogue is a contributing factor to
antifreeze activity, specifically recrystallization-inhibition (RI)
activity.19 This work has not only shed new information on the
underlying mechanism of action of biological antifreezes, but also
highlights the importance of understanding hydration in all biologi-
cal processes. The current manuscript explores the relationship
between hydration of carbohydrates and carbohydrate derivatives
with recrystallization-inhibition activity. The ultimate goal of this
work is to enable accurate prediction of structures that function as
potent inhibitors of ice recrystallization for cryomedical and other
commercial applications.
camera (Nikon CoolPix 5000) fitted to the microscope. A total of
three images were taken from each wafer. During flash freezing,
ice crystals spontaneously nucleated from the supercooled solution.
These initial crystals were relatively homogeneous in size and quite
small. During the annealing cycle, recrystallization occurred,
resulting in a dramatic increase in ice crystal size. A quantitative
measure of the difference in recrystallization inhibition of two
compounds X and Y is the difference in the dynamics of the ice
crystal size distribution. Image analysis of the ice wafers was
performed using a novel domain recognition software (DRS)22
program that was developed at the Steacie Institute for Molecular
Sciences (SIMS) of the National Research Council of Canada
(NRCC). This processing employed the Microsoft Windows
Graphical User Interface to allow a user to visually demarcate and
store the vertices of ice domains in a digital micrograph. These
data were then used to calculate the domain areas. To eliminate
the need to fully process each micrograph, an algorithm was
developed to randomly display a number of x/y locations. The
algorithm made use of a built-in pseudo random number generator
(rand(x)) and was written so that no two locations were closer than
1/10th the field of view of the micrograph. The formula for the
area of a polygon that is not self-intersecting and contains no holes
is then given by eq 2,
Material and Methods
The monosaccharides used in this study were commercially
available and purchased from Sigma-Aldrich. All C-linked pyranose
derivatives were synthesized using standard literature procedures
(see Supporting Information and ref 19). Isentropic molar com-
pressibility (IMC) values were obtained from ultrasound density
measurements reported in the literature.8 Hydration numbers, nh,
were obtained using the Passynsky equation, eq 1,8,20
nh)(nw ⁄ns)(1 - ꢀs ⁄ ꢀso)
(1)
where nw and ns are the mole fractions of water and the solute,
respectively; and ꢀs and ꢀso are the isentropic coefficients of
compressibility of the solute and water, respectively.
1N-1
2 i)0
A )
(x yi + 1 - xi + 1 yi)
(2)
∑
i
Recrystallization-Inhibition (RI) Assay. Sample analysis for
RI activity was performed using the “splat cooling” method as
previously described.21 In this method, the analyte was dissolved
in phosphate buffered saline (PBS) solution and a 10 µL droplet
of this solution was dropped from a micropipette through a two-
meter high plastic tube (10 cm in diametre) onto a block of polished
aluminum precooled to approximately -80 °C. The droplet froze
instantly on the polished aluminum block and was approximately
1 cm in diameter and 20 µm thick. This wafer was then carefully
removed from the surface of the block and transferred to a cryostage
held at -6.4 °C for annealing. After a period of 30 min, the wafer
was photographed between crossed polarizing filters using a digital
where N is the number of vertices, and Σx0,Σy0 to ΣxN-1,ΣyN-1
are the vertices circumventing the polygon in a clockwise
direction. The point Σx0,Σy0is assumed to be equivalent to the
point ΣxN,ΣyN. The software was written in C using Microsoft
Visual Studio 6.0 on a Pentium class personal computer running
Microsoft Windows 2000 or XP. All data were plotted and
analyzed using Microsoft Excel.
Thermal Hysteresis Assay. Nanoliter osmometry was performed
using a nanoliter osmometer (Clifton Technical Physics, Hartford,
NY) as described by Chakrabartty and Hew.23 All measurements
were made in doubly distilled water. Ice crystal morphology was
observed through a Leitz compound microscope equipped with an
Olympus 20X (infinity corrected) objective, Leitz Periplan 32X
photo eyepiece and a Hitachi KP-M2U CCD camera connected to
a Toshiba MV13K1 TV/VCR system. Still images were captured
directly using a Nikon CoolPix 5000 digital camera.
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Results and Discussion
The “hydration layer” is defined as water that encompasses
the carbohydrate and is often bound very tightly. Specific
hypotheses to rationalize the observed hydration characteristics
of a carbohydrate include: hydration number,10 anomeric
effect,11 hydrophobic index,12 hydrophilic volume,13 and com-
patibility with bulk water based upon the position of the next-
nearest-neighbor hydroxyl groups.8,9,14 Subsequent to the latter
hypothesis, a revised stereospecific hydration model has sug-
gested that hydration of a carbohydrate depends upon the ratio
of axial to equatorial hydroxyl groups.15 In an attempt to
generate a unifying hypothesis consistent with the influence of
carbohydrate stereochemistry, key thermodynamic parameters
thought to dictate hydration were measured by Galema et al.8,9
By using molecular dynamics simulations, kinetic experiments,
and density and ultrasound measurements, the partial molar
volumes, isentropic partial molar compressibilities, and hydra-
tion numbers of many commercially available hexoses have been
determined and correlated to carbohydrate stereochemistry.
(19) Czechura, P.; Tam, R. Y.; Murphy, A. V.; Dimitrijevic, E.; Ben, R. N.
J. Am. Chem. Soc. 2008, 130, 2928–2929.
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(23) Chakrabartty, A.; Hew, C. L. Eur. J. Biochem. 1991, 202, 1057–1063.
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