L. Betti et al. / Bioorg. Med. Chem. 14 (2006) 2828–2836
2835
of ice-cold 50 mM Tris–HCl buffer at pH 7.7 containing
5 mM EDTA, as reported above (buffer T1). The
homogenate was centrifuged at 48,000g for 15 min at
4 °C. The resulting pellet was diluted in 20 volumes of
50 mM Tris–HCl buffer at pH 7.7 and used in the bind-
ing assay.
F.M. wishes to thank the Divisione di Chimica Farma-
`
ceutica della Societa Chimica Italiana and Farmindu-
stria for the ꢀPremio Farmindustria 2004ꢁ award.
Supplementary data
The binding assay was performed in triplicate, by incu-
bating aliquots of the membrane fraction (0.2–0.3 mg of
protein) in Tris–HCl buffer at pH 7.7 with approximate-
ly 2 nM [3H]rauwolscine in a final volume of 1 mL. Incu-
bation was carried out at 25 °C for 60 min. Non-specific
binding was defined in the presence of 10 lM rauwols-
cine. The binding reaction was concluded by filtration
through Whatman GF/C glass fiber filters under re-
duced pressure. Filters were washed four times with
5 mL aliquots of ice-cold buffer and placed in scintilla-
tion vials. The level of specific binding was obtained
by subtracting the level of non-specific binding from
the total level of binding and approximated to be 85–
90% of the total level of binding. The receptor-bound
radioactivity was assessed as described above.
Supplementary data associated with this article can be
References and notes
1. (a) Lopez-Rodriguez, M. L.; Morcillo, M. J.; Fernandez,
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pillo, M.; Pardo, L.; Delgado, M.; Manzanares, J.;
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`
`
Patane, E.; Pittala, V.; Guerrera, F.; Salerno, L.; Romeo,
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Compounds were dissolved in buffer or DMSO (2%
buffer concentration) and added to the assay mixture.
A blank experiment was carried out to determine the ef-
fect of the solvent on binding. Protein estimation was
based on a reported method,13 after solubilization with
0.75 N sodium hydroxide, using bovine serum albumin
as a standard.
2. In the text, we use the following notation. The term
ꢀarylpiperazine moietyꢁ is in general referred to the
molecular portion constituted by a substituted phenylpip-
erazine moiety directly linked to the polymethylene spacer.
As an example, the o-isopropoxyphenylpiperazine group
of compound 18 is termed as the ꢀarylpiperazine moiety,ꢁ
while its o-ethoxyphenylpiperazine substituent bound to
the pyridazinone nucleus constitutes the so-called ꢀtermi-
nal heterocyclic moiety.ꢁ Such a notation derives from the
superposition mode of the new compounds to the phar-
macophoric model for a1-AR antagonists, showing their
phenylpiperazine group (bound to the spacer) onto the
HY1–HY2 system of the model, while the piperazine ring
linked to the pyridazinone moiety lies within a region of
space between HBA and HY3 (see Fig. 1).
The concentration of tested compound that produces
50% inhibition of specific [3H]prazosin or [3H]rauwols-
cine, or [3H]8-OH-DPAT binding (IC50) was determined
by log-probit analysis with seven concentrations of the
displacer, each performed in triplicate. Inhibition con-
stants (Ki) were calculated according to the Cheng–Prus-
off equation.14 Kd of [3H]prazosin binding to cortex
membranes was 0.24 nM (a1), Kd for [3H]rauwolscine
binding to cortex membranes was 4 nM (a2), and Kd
of [3H]8-OH-DPAT binding to cortex membranes was
2 nM (5-HT1AR).
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G.; Maccari, L.; Manetti, F.; Strappaghetti, G.; Corsano,
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graphic manipulations were performed on an SGI Ori-
gin300 server and an Octane 12K workstation by means
of the Catalyst (version 4.9) software package.15 All the
compounds used in this study were built using the 2D-
3D sketcher of Catalyst. A representative family of con-
formations was generated for each molecule using the
poling algorithm and the ꢀbest quality conformational
analysisꢁ method. Conformational diversity was empha-
sized by selection of the conformers that fell within
20 kcal/mol above the lowest energy conformation
found. The Compare/Fit command has been used to
superpose the studied compounds into the pharmaco-
phoric model for a1-AR antagonists.
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E. J. Med. Chem. 1977, 20, 880.
8. Bourdais, J. Bull. Soc. Chim. Fr. 1968, 8, 3246.
9. Betti, L.; Botta, M.; Corelli, F.; Floridi, M.; Giannaccini,
G.; Maccari, L.; Manetti, F.; Strappaghetti, G.; Tafi, A.;
Corsano, S. J. Med. Chem. 2002, 45, 3603.
10. Betti, L.; Floridi, M.; Giannaccini, G.; Manetti, F.;
Strappaghetti, G.; Tafi, A.; Botta, M. Bioorg. Med. Chem.
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Acknowledgments
M.B. thanks the Merk Research Laboratories (2004
Academic Development Program Chemistry Award).
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A.; Mella, M.; Toma, L. J. Med. Chem. 1999, 42, 173.