Angewandte Chemie International Edition
10.1002/anie.202000329
RESEARCH ARTICLE
modified pyridyl-triazole which can be broken into four parts
giving a large library of potentially synthesizable ligands (see
Scheme 1).19 However, the current syntheses of such
frameworks can be very time consuming taking more than a
day.20 The system we designed is capable of exploring a huge
range of possible self-assemblies constructed from three ligand
classes (totaling 56 ligands) and two different metals. This
is controlled using bespoke code written in Python such that the
chemical robot can perform all the liquid-handling operations,
including cleaning procedures between one experiment and the
next, as well as control of analytical instruments and data
analysis. The design and the connectivity of the system is shown
in Figure 1.
exploration is algorithm-driven and closed-loop, running
a
sequence of experiments under an autonomous regime, which
increases the chances (in a reasonable time scale) of the
discovery of new compounds.
The autonomous decision making21 in this system focuses on
the exploration of the most interesting regions of the chemical
space by using live experimental data of reaction mixtures. For a
robust definition of interest, we use a measure of the change
that has occurred. The chemical space is defined by a selection
of the starting materials consisting of the potential ligand building
blocks and transition metal ions, and by three different reaction
parameters: i) reagent volumes; ii) reaction temperature; and iii)
reaction duration. To exemplify this idea, we had to establish
some synthetic constraints, so we aimed to explore a potential
ligand system with a new coordination motif, see Scheme 1. The
synthesis was carried out as a three-component reaction by
combining one pyridinecarboxaldehyde (from two possibilities),
one aminoalkyne (from a set of two) and one azide (from set of
four), each with a selected volume, for a chosen duration and
temperature. The full set of choices results in 394 million
possible reactions, demonstrating that even these limited inputs
defines a vast number of potential experiments.
Scheme 1. Small organic molecules used as chemical inputs for the synthesis
of ligands, via tandem CuAAC and imine formation reactions, prior to
complexation.
The routing of chemicals and solutions through the system is
conducted in a non-deterministic fashion, see Figure 2.25 This
means that the paths through which the solutions are
transported in the system are not predetermined. For each
processing step the system only knows which solution is needed
and where but not how to perform the operation. Instead the
system decides, using graph operations on the network
connection graph that describes the system. It chooses which
route stochastically (see SI) to utilize and optimizes its own route
for each single material transfer operation. The main benefits of
such a system are increased flexibility, reduced complexity and
high scalability. Such systems can even work around faults
arising in real time.
The reactor for the synthesis step consists of a catalytically
active 10 mL capacity copper coil,22-23 which allows for the
synthesis of the bespoke ligand system within a short duration of
under 2 h (ligand dependent). This activated reactor promotes
the coordination of the in situ formed ligand with leached Cu.
The ligand formation happens due to full or partial imine
condensation
and/or
copper-catalysed
alkyne-azide
cycloaddition (CuAAC),24 depending on the reaction temperature
and reaction duration. The experimental space is seven
dimensional as it is defined by the reagents chosen (one
aldehyde, one amine, one azide and one metal), the reagent
volumes used (from 0.5 mL to 5 mL each), the reaction duration
In order to investigate how best to make discoveries in an
experimental system we designed both the chemical space and
the exploration algorithm to not rely on any knowledge beyond
the initial choice of the ligand reaction envelope.26 These areas
may or may not contain discoveries, but the algorithm was
designed to focus exploration to these regions preferentially.
The algorithm does not build a model of the space during its
exploration through it. In this way the system is designed to
search in a stochastic manner, without biases or heuristics, yet
to find areas of interest. Also, rather than optimize27 the
reactivity, the system is coded to find as many interesting points
in a given space. To be able to evaluate each experiment as a
data point in the chemical space, the algorithm uses a live data
stream from three sensors (UV/Vis, mass spectrometry and pH)
to construct a simple and robust measure of the change
occurring over both ligand synthesis step, and the metal ion
(
from 5 to 120 min) and temperature (from 30 to 80 °C). The
different possible combinations of ligand precursors can make
6 potential ligands, see Scheme 1. The metal-exchange
5
reaction occurs once the ligand mixture collected from the
catalytically active reactor (without purification) undergoes a
second reaction step, consisting of complexation with a chosen
II
volume of one of two metal salt solutions – [Fe (ClO
4 2
) ] or
II
[Co (ClO )
4 2
]. Including the second coordination step, the number
of possible experiments in the chemical system increases to 4 x
14
1
0 . The cleaning, reaction activation and decision-making
operations are all fully automated, allowing the continuous
operation of the system without human involvement. The system
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