Communications
Although it is well accepted that optimum amphipathicity is
necessary for potent antimicrobial activity, increase in alkyl
The activities of bifurcated compounds 6–10 were then
tested against S. aureus, E. faecium, E. coli, A. baumannii, and
human erythrocytes. Colistin and vancomycin were used as ref-
erence drugs for assays against Gram-negative and Gram-posi-
tive bacteria, respectively (Table 1). The classical surfactant ce-
trimonium bromide (CTAB) was also tested against the bacte-
ria. Compound 6, which is the bifurcated analogue of 1, re-
tained activity against S. aureus (MIC: 23 mm), E. faecium (MIC:
46 mm), and E. coli (MIC: 23 mm), but lost activity against A. bau-
mannii (MIC>50 mm). However, with an HC50 value of 390 mm,
it was significantly less toxic toward erythrocytes than 1 (HC :
120 mm). Compound 7, the asymmetric bifurcated analogue of
2, consists of an octyl chain and a hexyl chain. With the excep-
tion of E. faecium, the parent compound 2 was active at 11 mm.
The bifurcated compound 7 displayed two-fold lower activity
(MIC: 22 mm) against S. aureus, E. coli, and A. baumannii, but it
was more active than 2 against E. faecium. The HC50 value of
compound 7 was 172 mm, while that of compound 2 was
105 mm. Like its single-chain counterpart 3, compound 8 dis-
played good activity against all bacteria (MIC range: 5–
10.5 mm), but was more active against E. faecium and relatively
less toxic. Compound 4 was found to be inactive against all
the bacteria tested up to 50 mm. In comparison, 9 turned out
to be a very active compound in this series. It displayed MIC
values of 5 mm against both S. aureus and E. coli, while against
E. faecium and A. baumannii the MIC value was 10.5 mm. Com-
pound 10 was as active as 9 (MIC: 6 mm) against S. aureus,
E. faecium, and E. coli, but slightly more active against A. bau-
mannii. Although the single-chain analogue 5 was less toxic
[7]
chain length also leads to a compromise in selectivity. We hy-
pothesized that by decreasing the chain length but not com-
promising much on overall amphiphilicity, further selectivity
could be achieved. One simple approach to do so was to bifur-
cate the alkyl chain, for example, by splitting the hexadecyl
long chain to two octyl chains. With this in mind, we designed
a set of new molecules containing two short alkyl chains in-
stead of one long chain.
We symmetrically and asymmetrically varied the length of
the two chains from hexyl to decyl. We deliberately avoided
using chains with an odd number of methylene units to obtain
asymmetry in the designs. The synthetic strategy is outlined in
Scheme 1. In the first step of synthesis, alkanals were first re-
acted with alkylamines in dry methanol and then reduced by
sodium borohydride to obtain dialkyl amines. These dialkyl
amines were then coupled to Boc-Lys(Boc)-OH in a chloroform/
N,N-dimethylformamide mixture using 2-(1H-benzotriazol-1-yl)-
5
0
1,1,3,3-tetramethyluronium
hexafluorophosphate
(HBTU)
chemistry. In compounds 1–5, single long-chain amines were
directly coupled to Boc-Lys(Boc)-OH. After purifying the com-
pounds by column chromatography, the Boc groups were sub-
sequently deprotected with 50% trifluoroacetic acid in di-
chloromethane to yield the final compounds. They were puri-
fied by HPLC to >95% purity and were subsequently charac-
1
13
terized by H NMR, C NMR, IR and HRMS.
(
HC : 185 mm), it was inactive against all bacteria. The classical
50
surfactant CTAB was active at 8.5 mm against all the bacteria
tested. Because selective antibacterial activity is the most de-
sired condition for membrane-active agents, it could be envi-
sioned from this study that bifurcation of long chains into any
membrane-active antibiotics containing such a feature should
substantially increase the selectivity of the resulting com-
pound.
To determine the potential of such compounds as antibacte-
rial agents, we chose to carry out further studies with com-
pound 9. The minimum bactericidal concentration (MBC) of 9
was determined to be 2ꢁMIC. The compound was also ob-
served to be nontoxic toward human embryonic kidney (HEK)
cells at its MBC, which emphasizes the selectivity of the com-
pound at bactericidal concentrations (Figure 1). The kinetics of
the bactericidal action of compound 9 were then studied.
Within minutes of treatment at concentrations only three-fold
its MIC value, 9 was able to lyse cells of both Gram-negative
(
Figure 2A) and Gram-positive bacteria (Supporting Informa-
tion Figure S1). The capacity of the compound to lyse bacterial
cells could be attributed to its membrane-active nature.
Because it is widely known that bacteria have difficulty in
developing resistance against membrane-active agents, the
ability of the compound to induce resistance development
was studied (Figure 2B). Serial passage of bacterial culture
Scheme 1. Reagents and conditions: a) NaN
MeOH, 808C, 24 h, 2. HCl; c) Boc-Lys(Boc)-OH, HBTU, DIPEA, DMF/CHCl
2:1), RT, 24 h; d) CF COOH (50%), CH Cl , RT, 6 h; e) 1. R’NH /MeOH, RT, 8 h,
. NaBH
, 08C!RT, 12 h, 3. HCl.
3 3
, MeOH, RT, 24 h; b) 1. Ph P/
(
both S. aureus and E. coli) at sub-MIC concentrations of com-
3
pound 9 yielded no resistant mutants. In comparison, norfloxa-
cin (comparator drug for S. aureus) and colistin (comparator
(
2
3
2
2
2
4
&
ChemMedChem 2016, 11, 1 – 6
2
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