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O. Pav et al. / Tetrahedron xxx (2017) 1e9
8
19 (0.2 g; 0.8 mmol) and TEA (0.3 mL; 2.2 mmol) in pyridine
(10 mL). The reaction mixture was stirred for 16 h at r.t., quenched
by the addition of methanol (1 mL) and evaporated. The residue
was dissolved in chloroform (500 mL) and extracted with a satu-
rated solution of sodium hydrogencarbonate (3 ꢂ 200 mL). The
organic layer was dried over anhydrous sodium sulfate and evap-
orated. The crude dimethoxytrityl derivative was used without
further purification. ESI-MS calcd for C30H32N2O6P (M þ H)þ 547.2
found 547.2.
2,4,6-Triisopropylbenzenesulfonyl chloride (0.3 g; 1.2 mmol)
was added to a mixture of DMT derivative, TEA (0.3 mL; 2.2 mmol)
and DMAP (0.1 g; 0.8 mmol) in acetonitrile (10 mL). The reaction
mixture was stirred for 16 h at r.t. After that, 10 mL of aqueous
ammonia was added. The reaction mixture was stirred for 16 h at
r.t. and evaporated. The crude cytosine derivative was dissolved in
aqueous 50% methanol (100 mL) and treated with Dowex 50 (Hþ
form, 10 g). The resin was filtered off and washed with methanol
(100 mL) and water (100 mL). The product was released from the
resin with 5% aqueous ammonia (100 mL), evaporated, purified by
preparative HPLC (elution with gradient of 0e10% methanol in
water) and freeze-dried from water to yield 0.12 g (61%) of white
lyofilisate.
1425, 1335, 1310, 1212, 1174, 1146, 1081, 796, 730, 644.
HRMS (FAB) calcd for C10H15N5O2P (M þ H)þ 268.0963, found
268.0962.
NMR data see Tables 2 and 3.
4.12. (3S,1R and 3R,1S) 3-(Guanin-9-yl)-1-
hydroxymethylphospholane 1-oxide (30)
2-Amino-4,6-dichloro-5-formamidopyrimidine 21 (1.1 g;
5.7 mmol) and DIPEA (2.6 mL; 15.2 mmol) were added to a solution
of 3-amino-1-trityloxymethylphospholane 1-oxide 16 (1.5 g;
3.8 mmol) in n-butanol (50 mL). The reaction mixture was stirred
for 40 h at 130 ꢀC and evaporated. 3-(2-Amino-6-chloropurine-9-
yl)-1-hydroxymethylphospholane 1-oxide was purified by chro-
matography on silica gel (first isocratic wash with 50% acetone/
toluene, second elution with gradient of 0e10% ethanol in chloro-
form). ESI-MS calcd for C29H28ClN5O2P (M þ H)þ 544.2, 546.2 found
544.2, 546.2.
After that, the residue was treated 16 h at 60 ꢀC with concen-
trated hydrochloric acid/methanol 1/10 (25 mL), diluted with water
(100 mL) and treated with Dowex 50 (Hþ form, 10 g). The resin was
filtered off and washed with methanol (100 mL) and water
(100 mL). The product was washed off of the resin with 5% aqueous
ammonia (100 mL), evaporated, purified by preparative HPLC
(elution with gradient of 0e20% methanol in water) and freeze-
dried from water to yield 0.63 g (58%) of white lyofilisate.
IR nmax (KBr) 3433, 2926, 1686, 1534, 1483, 1172, 1149, 1046, 781,
728, 638.
IR nmax (KBr) 3338, 3161, 1665, 1644, 1628, 1527, 1488, 1152, 1140,
1049, 1044, 787.
HRMS (FAB) calcd for C9H15N3O3P (M þ H)þ 244.0851, found
244.0850.
NMR data see Tables 2 and 3.
4.10. (3S,1R and 3R,1S) 1-Hydroxymethyl-3-(uracil-1-yl)
phospholane 1-oxide (28)
HRMS (FAB) calcd for C10H15N5O3P (M þ H)þ 284.0913, found
284.0913.
NMR data see Tables 2 and 3.
4-Nitrophenyl-3-ethoxyacryloylcarbamate (0.7 g; 2.8 mmol)
was added to a solution of 3-amino-1-trityloxymethylphospholane
1-oxide 16 (1.1 g; 2.8 mmol) in dioxane (50 mL). The reaction
mixture was stirred for 4 h at r.t. After that, Dowex 50 (Hþ form, 5 g)
was added and the suspension was stirred for 2 h at 90 ꢀC. The resin
was filtered off and washed with dioxane (100 mL). The product
was washed off of the resin with water (100 mL), evaporated, pu-
rified by preparative HPLC (elution with gradient of 0e10% meth-
anol in water) and freeze-dried from water to yield 0.51 g (75%) of
white lyofilisate.
4.13. (3S,1R and 3R,1S) 3-(Cytosin-1-yl)-1-
hydroxymethylphospholane 1-oxide (31)
Dimethoxytrityl chloride (0.3 g; 0.9 mmol) was added to a
mixture of 3-(uracil-1-yl)-1-hydroxymethylphospholane 1-oxide
28 (0.2 g; 0.8 mmol) and TEA (0.3 mL; 2.2 mmol) in pyridine
(10 mL). The reaction mixture was stirred for 16 h at r.t., quenched
by the addition of methanol (1 mL) and evaporated. The residue
was dissolved in chloroform (500 mL) and extracted with satu-
rated solution of sodium hydrogencarbonate (3 ꢂ 200 mL). The
organic layer was dried over anhydrous sodium sulfate and
evaporated. The crude dimethoxytrityl derivative was used
IR nmax (KBr) 3426, 3090, 2886, 2798, 1681, 1622, 1465, 1387,
1271, 1148, 1053, 765.
HRMS (FAB) calcd for C9H14N2O4P (M þ H)þ 245.0691, found
245.0690.
NMR data see Tables 1e3.
without further purification. ESI-MS calcd for
C30H32N2O6P
(M þ H)þ 547.2 found 547.2.
4.11. (3S,1R and 3R,1S) 3-(Adenin-9-yl)-1-
hydroxymethylphospholane 1-oxide (29)
2,4,6-Triisopropylbenzenesulfonyl chloride (0.3 g; 1.2 mmol)
was added to a mixture of DMT derivative, TEA (0.3 mL; 2.2 mmol)
and DMAP (0.1 g; 0.8 mmol) in acetonitrile (10 mL). The reaction
mixture was stirred for 16 h at r.t. After that, 10 mL of aqueous
ammonia was added. The reaction mixture was stirred for 16 h at
r.t. and evaporated. The crude cytosine derivative was dissolved in
50% methanol in water (100 mL) and treated with Dowex 50 (Hþ
form, 10 g). The resin was filtered off and washed with methanol
(100 mL) and water (100 mL). The product was released from the
resin with 5% aqueous ammonia (100 mL), evaporated, purified by
preparative HPLC (elution with gradient of 0e10% methanol in
water) and freeze-dried from water to yield 0.13 g (68%) of white
lyofilisate.
4,6-Dichloro-5-formamidopyrimidine 20 (0.6 g; 3.3 mmol) and
DIPEA (1.8 mL; 10.4 mmol) were added to a solution of 3-amino-1-
trityloxymethylphospholane 1-oxide 16 (1.0 g; 2.6 mmol) in n-
butanol (25 mL). The reaction mixture was stirred for 40 h at 130 ꢀC
and evaporated. The residue was treated 5 days at r.t. with aqueous
ammonia/acetonitrile 1/1 (25 mL) and evaporated. The crude
adenine derivative was treated at 60 ꢀC for 16 h with 80% acetic acid
in water (100 mL), diluted with water (100 mL) and treated with
Dowex 50 (Hþ form, 5 g). The resin was filtered off and washed with
methanol (100 mL) and water (100 mL). The product was washed
off of the resin with 5% aqueous ammonia (100 mL), evaporated,
purified by preparative HPLC (elution with gradient of 0e20%
methanol in water) and freeze-dried from water to yield 0.37 g
(54%) of white lyofilisate.
IR nmax (KBr) 3334, 3185, 1646, 1610, 1580, 1528, 1489, 1147, 1043,
787.
HRMS (FAB) calcd for C9H15N3O3P (M þ H)þ 244.0851, found
244.0850.
IR nmax (KBr) 3316, 3153, 2925, 2855, 1650, 1605, 1574, 1485,
NMR data see Tables 2 and 3.
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Please cite this article in press as: Pav O, et al., Novel phosphanucleoside analogs of dideoxynucleosides, Tetrahedron (2017), http://dx.doi.org/
10.1016/j.tet.2017.07.020