Advanced Synthesis & Catalysis
10.1002/adsc.201700678
5
0 µg·mL-1 kanamycin. 5 mL of the culture was used to
[3] a) J. S. Rossman, R. A. Lamb, Virology 2011, 411,
229-236; b) X. J. Xu, X. Y. Zhu, R. A. Dwek, J.
Stevens, I. A. Wilson, J. Virol. 2008, 82, 10493-
10501.
inoculate 400 mL of LB medium and shaking at 37 °C
until optical density (OD600) of the culture reached 0.5.
Then, 0.4 mL of
a 1 M IPTG (Isopropyl-β-D-
thiogalactopyranoside) were added to the medium to
induce the recombinant protein expression. After 16 h of
induction at 18 °С, cells were harvested by centrifugation
at 4,000 g for 10 min at 4 °С. The cell pellets were
suspended in 10 mL lysis buffer (100 mM NaCl, 50 mM
Tris, 1% Triton X-100, 1 mM PMSF, and pH 8.0) and
disrupted by sonification for 20 min. Cellular debris was
removed by centrifugation at 20,000 g for 20 min at 4 °С.
The supernatant containing the recombinant enzymes were
loaded onto a Ni-NTA column (Qiagen, Germany, 2 mL
column volume). The column was washed with washing
buffer (50 mM NaCl, 50 mM Tris, 10 mM imidazole,
adjusted to pH 8.0 with HCl) to remove unbound proteins.
Recombinant proteins were eluted using elution buffer (50
mM NaCl, 50 mM Tris, 500 mM imidazole, adjusted to pH
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Pat. 2013, 23, 409-423; b) A. J. Burnham, T.
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Cusack, R. W. H. Ruigrok, Structure 1993, 1, 19-26.
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BMC Infect. Dis. 2011, 11; b) S. Ludwig, R. Zell, M.
Schwemmle, S. Herold, Int. J. Med. Microbiol.
2014, 304, 894-901.
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H.-Y. Ma, L. Liu, J. Voglmeir, Catalysts 2016, 6,
212; b) C. M. Deijl, J. F. Vliegenthart, Biochem.
Bioph. Res. Co. 1983, 111, 668-674; c) H. Yu, X.
Chen, Org. Lett. 2006, 8, 2393-2396.
8
.0 with HCl). Eluted fractions were partially desalted by
[8] T. Sugai, G. J. Shen, Y. Ichikawa, C. H. Wong, J.
Am. Chem. Soc. 1993, 115, 413-421.
gel chromatography using prepacked PD-10 cartridges (GE
Healthcare).
[9] a) M. J. Kim, W. J. Hennen, H. M. Sweers, C. H.
Wong, J. Am. Chem. Soc. 1988, 110, 6481-6486; b)
C. C. Hsu, Z. Y. Hong, M. Wada, D. Franke, C. H.
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9122-9126; c) Q. Chen, L. Han, X. Chen, Y. Cui, J.
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The molecular mass and purity of the recombinant proteins
were monitored by 12% SDS-PAGE acrylamide gels after
Coomassie brilliant G-250 staining. The protein
concentration was determined using the quantification
method of Bradford with bovine serum albumin (BSA) as
quantification standard. The purified enzyme was stored at
-
80 °C in a 20% glycerol solution for further use.
[10] D. G. Gillingham, P. Stallforth, A. Adibekian, P. H.
Seeberger, D. Hilvert, Nat. Chem. 2010, 2, 102-105.
[11] The full-length open reading frame (ORF) encoding
a putative N-acetylneuraminate lyase (EC 4.1.3.3)
could be successfully cloned and was annotated as
Synthesis of Neu5Ac, KDN and KDN analogues
Reaction mixtures (5 mL) containing 222 mM of D-
mannose, D-glucose, D-galactose, 2-deoxy-D-glucose, L-
rhamnose, D-arabinose, L-arabinose or N-acetyl-D-
DfNAL
(Dyadobacter
fermentans
N-
mannosamine,
1110
mM
pyruvate,
sodium
acetylneuraminate lyase, Supporting information
Figure S1). Homology search revealed that DfNAL
(Uniprot ID C6VS55) shares 45% amino acid
identity to N-acetylneuraminate lyases from
Escherichia coli and Staphylococcus carnosus, 36%
with Pasteurella multocida and 24% with
Staphylococcus aureus isoforms. DfNAL shares
also reasonable amino acid identities with N-
acetylneuraminate lyases Homo sapiens (39%) and
Sus scrofa (32%).
phosphate/citrate buffer (50 mM, pH 8.0) and recombinant
enzyme (DfNAL, 760 U), were incubated for at 37 °С 12 h
reaction time. The corresponding sialic acids (1, 2, 3, 4, 5,
6
a, 7 and 8a) were isolated by silica gel chromatography
using a mixture AcOEt/MeOH/AcOH (2:1:1) as the eluent.
Reactions were monitored by thin-layer chromatography
(
TLC). TLC was performed by spotting 1 µL from reaction
mixture using AcOEt/MeOH/AcOH (2:1:1) as the eluent.
Compounds were stained using an orcinol based stain (2
-1
mg·mL orcinol in 20% H
2
SO
4
).
[12] L. S. Li, Y. L. Wu, Curr. Org. Chem. 2003, 7, 447-
4
75.
[
[
13] L. Q. Wen, Y. Zheng, T. H. Li, P. G. Wang, Bioorg.
Med. Chem. Lett. 2016, 26, 2825-2828.
14] H. L. Yao, L. P. Conway, M. M. Wang, K. Huang,
L. Liu, J. Voglmeir, Glycoconjugate J. 2016, 33,
Acknowledgements
This work was supported in part by the Natural Science
Foundation of China (grant numbers 31471703, A0201300537
and 31671854 to J.V. and L.L.), and the 100 Foreign Talents Plan
2
19-226.
[
15] a) X. Garrabou, L. Gomez, J. Joglar, S. Gil, T.
(grant number JSB2014012 to J.V.).
Parella, J. Bujons, P. Clapes, Chem.-Eur. J. 2010,
1
6, 10691-10706; b) P. Laborda, F. J. Sayago, C.
Cativiela, T. Parella, J. Joglar, P. Clapes, Org. Lett.
014, 16, 1422-1425; c) T. Gefflaut, C. Blonski, J.
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[16] Both 9 and 10 were detected by HPLC (absorption
1
[
wavelength: 300 nm). Reaction conditions:
3
2
85 (Eds.: R. W. Compans, M. B. A. Oldstone),
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2
5
-
5
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