Organic & Biomolecular Chemistry
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7.50 (d, J = 8.1 Hz, 2H), 7.39 (d, J = 9.3 Hz, 1H), 4.84–4.68 (m, with water. The crude was extracted with ethyl acetate, washed
2H), 4.51–4.39 (m, 2H), 3.85 (s, 2H), 3.71–3.64 (m, 2H), 2.73 (t, with saturated brine, and dried over MgSO4. After filtering and
J = 5.6 Hz, 2H). 13C NMR (101 MHz, MeOD-d4) δ 174.4, 168.4, concentrated, the residue was purified by flash chromato-
159.8, 142.8, 133.4, 128.7, 127.1, 126.7 (q, JC–F = 5.1 Hz), 125.4, graphy on silica gel column to afford the product.
124.3, 121.6, 116.4, 113.9, 81.2 (d, JC–F = 171 Hz), 68.7 (d, JC–F
=
2-((4-(5-(4-(2-Fluoroethoxy)-3-(trifluoromethyl)phenyl)-1,2,4-
20 Hz), 60.1, 52.5, 50.3. HRMS (ESI) calcd for C20H19F4N3O3 oxadiazol-3-yl)benzyl)oxy)ethan-1-ol (17a). Compound 17a was
[M + H+] 426.1435, found 426.1432.
purified by flash chromatography, eluted with hexane/ethyl
acetate (2/1, v/v) to afford off-white solid. Yield: 35%, MP:
109–110 °C. 1H NMR (400 MHz, CDCl3) δ 8.42 (s, 1H), 8.30 (dd,
General procedure for the synthesis of 15a–b
To a round-bottom flask equipped with a stir bar was added J = 8.6, 1.4 Hz, 1H), 8.11 (d, J = 8.1 Hz, 2H), 7.46 (d, J = 8.0 Hz,
aldehyde 14 32,33 (1.0 eq.), amine (1.5 eq.), methanol (14 mL 2H), 7.13 (d, J = 8.7 Hz, 1H), 4.89–4.71 (m, 2H), 4.62 (s, 2H),
mmol−1), and acetic acid (0.5 mL mmol−1). The reaction 4.46–4.32 (m, 2H), 3.82–3.73 (m, 2H), 3.67–3.59 (m, 2H), 2.19
mixture was stirred for 1 h at which time sodium cyanoborohy- (br, 1H). 13C NMR (101 MHz, CDCl3) δ 174.2, 168.7, 159.6,
dride (1.0 eq.) was added. The reaction mixture was stirred 141.4, 133.3, 127.9, 127.7 (q, JC–F = 5.2 Hz), 127.6, 126.1, 122.7
overnight and diluted with water. The precipitate was filtered (q, JC–F = 271 Hz), 120.2 (q, JC–F = 32 Hz), 117.0, 113.4, 81.3 (d,
off and washed with water to give off-white solid product 15a–b. JC–F = 172 Hz), 72.7, 71.7, 68.4 (d, JC–F = 21 Hz), 61.9. HRMS
2-((4-(5-(4-(2-Fluoroethoxy)-3-(trifluoromethyl)phenyl)-1,2,4- (ESI) calcd for C20H18F4N2O4 [M + H+] 427.1245, found
oxadiazol-3-yl)benzyl)amino)propane-1,3-diol (15a). Yield: 427.1240.
50%, off-white solid, MP: 135–137 °C. 1H NMR (400 MHz,
2-(2-((4-(5-(4-(2-Fluoroethoxy)-3-(trifluoromethyl)phenyl)-1,2,4-
DMSO-d6) δ 8.47–8.41 (m, 1H), 8.34 (s, 1H), 8.04 (d, J = 8.2 Hz, oxadiazol-3-yl)benzyl)oxy)ethoxy)ethan-1-ol (17b). Compound
2H), 7.57 (d, J = 8.0 Hz, 3H), 4.89–4.70 (m, 2H), 4.63–4.50 (m, 17b was purified by flash chromatography, eluted with hexane/
2H), 4.45 (s, 2H), 3.88 (s, 2H), 3.49–3.35 (m, 4H), 2.61–2.53 (m, ethyl acetate (1/1, v/v) to afford an off-white semi-solid. Yield:
1H). 13C NMR (101 MHz, DMSO-d6) δ 174.0, 168.2, 159.5, 39%. 1H NMR (400 MHz, CDCl3) δ 8.43 (s, 1H), 8.32 (d, J =
145.6, 134.1, 128.6, 127.0, 126.6 (q, JC–F = 5.1 Hz), 124.2, 122.4 8.5 Hz, 1H), 7.94 (d, J = 7.8 Hz, 1H), 7.82 (d, J = 10.3 Hz, 1H),
(q, JC–F = 274 Hz) 117.9, 116.0, 115.1, 109.6, 81.7 (d, JC–F = 162 7.71–7.51 (m, 2H), 7.16 (d, J = 8.7 Hz, 1H), 4.91–4.85 (m, 1H),
Hz), 68.8 (q, JC–F = 20 Hz), 61.1, 60.5, 50.5. HRMS (ESI) calcd 4.79–4.74 (m, 1H), 4.70 (s, 2H), 4.47–4.42 (m, 1H), 4.41–4.35
for C21H21F4N3O4 [M + H+] 456.1541, found 456.1537.
(m, 1H), 3.79–3.69 (m, 6H), 3.67–3.60 (m, 2H), 2.41 (br, 1H).
(1-(4-(5-(4-(2-Fluoroethoxy)-3-(trifluoromethyl)phenyl)-1,2,4- 13C NMR (101 MHz, CDCl3) δ 174.4, 168.0, 159.5, 141.8, 133.3,
oxadiazol-3-yl)benzyl)azetidin-3-yl)methanol (15b). Yield: 23%, 128.0, 127.7 (q, JC–F = 5.4 Hz), 127.2, 126.5, 122.8 (q, JC–F = 274
white solid, MP: 114–116 °C. 1H NMR (400 MHz, DMSO-d6) Hz), 119.0 (q, JC–F = 32 Hz), 116.8, 113.4, 81.2 (d, JC–F = 173
δ 8.45 (d, J = 8.8 Hz, 1H), 8.36–8.32 (m, 1H), 8.12 (d, J = 8.2 Hz, Hz), 72.5, 70.3, 70.0, 68.4 (d, JC–F = 21 Hz), 66.4, 61.8. HRMS
2H), 7.65–7.55 (m, 3H), 5.49 (s, 1H), 4.88–4.82 (m, 1H), (ESI) calcd for C22H22F4N2O5 [M + H+] 471.1583, found
4.78–4.71 (m, 1H), 4.64–4.57 (m, 1H), 4.57–4.49 (m, 1H), 471.1589.
3.41–3.27 (m, 8H), 2.34–2.21 (m, 1H).
2-(2-(2-((4-(5-(4-(2-Fluoroethoxy)-3-(trifluoromethyl)phenyl)-
3-(4-(Chloromethyl)phenyl)-5-(4-(2-fluoroethoxy)-3-(trifluoro- 1,2,4-oxadiazol-3-yl)benzyl)oxy)ethoxy)ethoxy)ethan-1-ol (17c).
methyl)phenyl)-1,2,4-oxadiazole (16). To a round-bottom flask Compound 17c was purified by flash chromatography, eluted
was added cyanuric chloride (253 mg, 1.37 mmol) and DMF with hexane/ethyl acetate (1/3, v/v) to afford an off-white semi-
1
(2.5 mL). A solution of 10c (500 mg, 1.31 mmol) in dichloro- solid. Yield: 42%. H NMR (400 MHz, CDCl3) δ 8.45 (br, 1H),
methane (3.5 mL) was added dropwise at RT, and the reaction 8.33 (d, J = 8.7 Hz, 1H), 8.13 (d, J = 8.1 Hz, 2H), 7.49 (d, J =
was continued to stir at RT for overnight. Then, the reaction 8.1 Hz, 2H), 7.16 (d, J = 8.8 Hz, 1H), 4.90–4.75 (m, 2H), 4.64 (s,
mixture was diluted with dichloromethane and water. The di- 2H), 4.49–4.36 (m, 2H), 3.74–3.61 (m, 12H), 2.63 (br, 1H). 13C
chloromethane layer was then separated and concentrated in NMR (101 MHz, CDCl3) δ 174.2, 168.8, 159.6, 141.7, 132.2,
vacuum to afford crude product (400 mg, 73%). The crude 127.9, 127.7 (q, JC–F = 5.2 Hz), 127.6, 125.9, 122.7 (q, JC–F
product was used directly for the next step. 1H NMR (400 MHz, 271 Hz), 120.2 (q, JC–F = 32 Hz), 117.1, 113.4, 81.3 (d, JC–F
=
=
CDCl3) δ = 8.47 (d, J = 2.0 Hz, 1H), 8.35 (dd, J = 8.8 Hz, 2.0 Hz, 171 Hz), 72.7, 72.5, 70.7, 70.6, 70.3, 69.7, 68.4 (d, JC–F = 21 Hz),
1H), 8.17 (d, J = 8.0 Hz, 2H), 7.54 (d, J = 8.4 Hz, 2H), 7.18 (d, J = 61.7. HRMS (ESI) calcd for C24H26F4N2O6 [M + H+] 515.1800,
8.8 Hz, 1H), 4.93–4.76 (m, 2H), 4.65 (s, 2H), 4.48–4.36 (m, 2H).
found 515.1806.
1-(4-(5-(4-(2-Fluoroethoxy)-3-(trifluoromethyl)phenyl)-1,2,4-
oxadiazol-3-yl)phenyl)-2,5,8,11-tetraoxatridecan-13-ol (17d).
General procedure for the synthesis of 17a–e and 17g
To a round-bottom flask equipped with a stir bar was added Compound 17d was purified by flash chromatography, eluted
alcohols (10 eq.) and THF (2 mL mmol−1). After cooling to with hexane/ethyl acetate (1/3, v/v) to afford an off-white semi-
0 °C, sodium hydride (1.8 eq.) was added portionwise, and the solid. Yield: 25%. 1H NMR (400 MHz, CDCl3) δ 8.33 (d, J =
reaction vessel was equipped with a reflux condenser and 5.7 Hz, 1H), 8.25–8.18 (m, 1H), 8.07–8.00 (m, 2H), 7.40 (d, J =
heated to 80 °C and stirred for 30 min. Chloride 16 (1.0 eq.) 7.9 Hz, 2H), 7.06 (d, J = 8.7 Hz, 1H), 4.80–4.64 (m, 3H),
was added to the flask and the mixture was stirred overnight. 4.59–4.52 (m, 2H), 4.36–4.27 (m, 2H), 3.69–3.54 (m, 14H),
The reaction was cooled to room temperature and quenched 3.54–3.48 (m, 2H). 13C NMR (101 MHz, CDCl3) δ 173.9, 168.3,
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Org. Biomol. Chem., 2018, 16, 9171–9184 | 9179