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Dalton Transactions
Page 2 of 8
DOI: 10.1039/C7DT04604A
ARTICLE
Dalton Transactions
Elemental analyses were carried out by the Serveis Científic i left unperturbed for the slow evaporation of the solvent.
Tecnològics de la Universitat de Barcelona. UV-Vis experiments Green single crystals, suitable for X-ray diffraction
were performed with a Varian Cary-100 spectrophotometer, measurements (see Supporting Information for X-ray data),
and fluorescence measurements were achieved using
a
were obtained with a yield of 51% (based on copper).
HORIBA Jobin–Yvon iHR320 spectrofluorimeter at room Elemental analysis calcd. for C26H24Cl4N4Cu2 (%): C 47.21, H
temperature. The photomultiplier detector voltage was set at 3.66, N 8.47; found: C 47.38, H 3.89, N 8.58. IR (KBr, cm–1):
950 V, and the instrument excitation and emission slits were 3439 (ν(OH) + ν(NH)), 3065 (ν(Csp2H)), 1608 (ν(C=N)), 1062 (ν(C-
both set at 5 nm. The concentrations of DNA and complexes N)).
used for the UV-vis and fluorescence studies are described in
Gel Electrophoresis.
the section Results and Discussion.
[Cu(L)Cl2]2: a stock solution of the complex was prepared in
Preparation of the ligand L and the complexes [[Pt(L)Cl2] and
1 mM sodium cacodylate–20 mM NaCl buffer (pH = 7.2).
pBR322 plasmid DNA aliquots (0.01 mg mL−1, 15 µM referred
[Cu(L)Cl2]2.
Ligand:
The
ligand
(E)-phenyl-N-((pyridin-2- to base pairs) in 1 mM cacodylate–20 mM NaCl buffer were
yl)methylene)methanamine16 (Scheme 1,
L
) was prepared by incubated with [Cu(L)Cl2]2 for 1 h at 37 °C. Subsequently,
ascorbic acid (1 mM cacodylate–20 mM NaCl buffer) was
added (in the case of the experiments without ascorbic acid,
this step was not done), and the resulting mixture was
incubated at 37 °C for an additional hour. Next, the reaction
samples were quenched with 4 μL of a solution containing 30%
(v/v) glycerol and 0.25% (w/v) xylene cyanol, and then
electrophoretized on agarose gel (1% in TAE buffer, Tris-
acetate–EDTA) for 2 h at 1.5 V cm−1. The electrophoresis was
carried out using a BIORAD horizontal tank connected to a
CONSORT EV231 variable potential power supply. Samples of
free DNA and DNA in the presence of ascorbic acid were used
as controls. Afterwards, the DNA was stained with SYBR® safe
and the gel was photographed with a BIORAD Gel Doc™ EZ
Imager.
condensation of pyridine-2-carbaldehyde and benzylamine.
was obtained as an oil, with a yield of 70%.
L
1H NMR (400 MHz, CDCl3): δ = 8.62 (d, 1H, H6), 8.47 (s, 1H,
H7), 8.05 (d, 1H, H3), 7.71 (t, 1H, H4), 7.27 (m, 2H, H11 and
H12), 7.23 (t, 1H, H5), 7.20 (t, 1H, H13), 4.86 (s, 2H, H9).
13C{1H}-NMR (101 MHz, CDCl3, ppm): δ = 164.3 (C7), 156.0 (C2),
150.8 (C6), 140.1 (C10), 138.1 (C4), 130.0 (C12), 129.7 (C11),
128.7 (C13), 126.3 (C5), 122.8 (C3), 66.4 (C9). IR (KBr, cm–1):
3383 (ν(NH)), 3100-3000 (ν(Csp2H)), 1643 (ν(C=N)), 1188 (ν(C-
N)).
[Pt(L)Cl2]: Solutions containing 10-100 uM of the complex, 1 %
DMSO and 15 µMbp pBR322 plasmid DNA were incubated for 24 h
[Pt(L)Cl2]: a methanolic solution of cis-[PtCl2(DMSO)2] (0.211 g; 0.5
mmol; 20 mL) was refluxed until dissolution of the platinum
precursor. After filtration, a methanolic solution of ligand L (0.106 g;
0.5 mmol; 3 mL) was added and the resulting reaction mixture was
stirred at room temperature for 30 minutes. Subsequently, the
orange precipitate was isolated by filtration and washed with
methanol. After drying in air, 0.091 g of the platinum(II) complex
at 37 °C. Next, the reaction samples were quenched with 4 μL
of a solution containing 30% (v/v) glycerol and 0.25% (w/v)
xylene cyanol, and then electrophoretized on agarose gel (1%
in TBE buffer 1X, Tris-Borate–EDTA) for 1 h at 6.25 V cm−1
.
X-ray crystallography. Single-crystal X-ray diffraction.
A single crystal of [Cu(L)Cl2]2 in silicon grease was mounted on
the tip of a glass fibre and transferred to the goniometer head,
under a cryostream of nitrogen. Data were collected on a
SuperNova diffractometer equipped with an Atlas detector,
using CrysAlis PRO software, and monochromated Mo K
α
radiation (0.71073 Å) at 150 K.18 The initial structural model
containing the coordination molecule was obtained using the
Superflip structure solution program.19 Full-matrix least-
squares refinement on F2 with anisotropic displacement
parameters for all nonhydrogen atoms was carried out using
SHELXL2017.20 All H atoms were initially located in difference
Fourier maps and were further treated as riding on their
was obtained (Yield
= 39%). Elemental analysis calcd. for
C13H12Cl2N2Pt (%): C 33.78, H 2.62, N 6.06; found: C 33.62, H
2.63, N 6.06. 1H NMR (400 MHz, [D6]DMSO): δ = 9.37 (d, 1H,
H2), 9.30 (s, 1H, H7), 8.37 (t, 1H, H4), 8.16 (d, 1H, H5), 7.91 (t,
1H, H3), 7.53 (d, 1H, H11), 7.40 (t, 1H, H12), 7.35 (t, 1H, H13),
5.32 (s, 2H, H9). 13C{1H}-NMR (101 MHz, [D6]DMSO, ppm): δ =
171.9 (C7), 156.9 (C6), 148.8 (C2), 140.5 (C4), 138.2 (C10),
136.0 (C3), 129.2 (C5), 128.8 (C11), 128.4 (C12), 128.0 (C13),
60.9 (C9). IR (KBr, cm–1): 3100-3000 (ν(Csp2H)), 1622 (ν(C=N)),
522 and 448 (ν(Pt-N)).
parent atoms with C(aromatic)−H
=
0.95
Å
and
C(methylene)−H = 0.99 Å. Details on crystal data, data
collection and structure refinement are given in the Supporting
Information.
These data can be obtained free of charge from the Cambridge
[Cu(L)Cl2]2: An ethanolic solution of ligand
L (39.3 mg, 0.2
Crystallographic
Data
Center
via
mmol; 5 mL) was added to an ethanolic solution of CuCl2∙2H2O
(34.0 mg, 0.2 mmol; 15 mL). The resulting green solution was
2 | Dalton Trans., 2018, 47, 1-6
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