808
M. Kirita et al.
1
mM DTT. The enzyme was eluted at a flow rate of 2
The de novo sequence analysis was performed using
a Serveyo-LC-system (Thermo Fisher Scientific K.K.,
Japan) with a MS system LTQ-orbitrap mass spectrom-
eter (Thermo Fisher Scientific K.K., Japan). LC–MS/
MS was performed using a Zorbax SB-300 column
(0.075 mm i.d. × 50 mm, Agilent Technologies, Japan)
at a flow rate of 200 μL min . Mixtures of A (0.1%
(v/v) formic acid) and B (80% (v/v) methanol contain-
ing 0.1% (v/v) formic acid) were used as mobile
phases. The initial eluent used was 5% mobile phase
B, followed by a linear gradient from 5 to 55% B for
65 min, 100% B for 10 min, and finally 5% B for 15
min.
−
1
mL min using a linear gradient of 0–1 M NaCl in the
same buffer. Active fractions were combined, desalted,
and concentrated by ultrafiltration. Subsequently, the
sample was prepared with 1.5 M ammonium sulfate
and loaded on to a Phenyl Sepharose HP column
−
1
(
Hiload 26/10, GE Healthcare, Japan) that had been
previously equilibrated with 100 mM phosphate buffer
pH 7.5) containing 1 mM DTT and 1.5 M ammonium
sulfate. Elution was performed at a flow rate of 2 mL
(
−
1
min using a linear gradient of 1.5–0 M ammonium
sulfate. Active fractions were collected, desalted, and
concentrated as above. For further purification, an ali-
quot of the eluate from the Phenyl Sepharose HP col-
umn was loaded onto an anion exchange column
Optimal pH and temperature of the enzyme. Opti-
mal pH and temperature were assessed using 0.25 mL
of crude enzyme and 0.05 mM EGCG as a substrate, in
(
TSK-gel BioAssist Q, 4.6-mm i.d. × 5 cm; TOSHO
corporation, Japan) that had been previously equili-
brated with 20 mM Tris–HCl (pH 7.5) containing
1
1
the same buffer. The active fractions were collected,
desalted, and concentrated as above. Each purified sam-
ple was subsequently analyzed using 12% SDS-PAGE.
a solution containing 2.5 mM MgCl , 0.04% ascorbic
mM DTT. The enzyme was eluted at a flow rate of
2
−
1
acid, and 0.5 mM SAM. Optimal pH was determined in
the range of 3–10 using 20 mM acetate buffer (pH,
mL min using a 0–0.5 M linear gradient of NaCl in
3
2
.0–5.5), 20 mM phosphate buffer (pH, 6.0–7.0), and
0 mM Tris–HCl (pH, 7.5–10). The mixture was incu-
bated at 37 °C for 6 h. The optimal temperature was
determined by incubation with 20 mM phosphate buffer
SDS-PAGE, 2D gel electrophoresis, and trypsin
(pH 7.0) for 6 h and O-methylated EGCGs were ana-
digestion.
Active fractions from the Phenyl
lyzed using HPLC.
Sepharose HP column were separated using 12%
SDS-PAGE and 2D gel electrophoresis. Bands of
interest were excised from SDS-PAGE gels. For 2D
gel electrophoresis, isoelectric focusing was per-
formed using an Ettan IPGphor3 IEF System (GE
Healthcare, Japan). Immobiline Dry Strip linear
immobilized pH gradient gel strips (7 cm) with a pH
range of 3–10 (GE Healthcare, Japan) were rehy-
drated in a solution containing 9 M urea, 2% (w/v)
CHAPS, 0.5% (v/v) ampholytes (pH 3–10), 0.002%
bromophenol blue, and 20 μg of protein. Proteins
were focused at 500 V for 1 h, 1000 V for 1 h, 8000
V for 2 h, and 8000 V for 12 h at 20 °C. After focus-
ing, Immobiline Dry Strips were embedded onto 4–
Culture of mycelia in a jar fermentor and production
of EGCG3″Me.
Mycelia were cultured in 300 mL
Erlenmeyer flasks containing 150 mL of 0.02% glu-
cose, 0.01% peptone, 0.002% yeast extract, 0.002%
KH PO , and 0.001% MgSO . The culture was pre-
2
4
4
pared in a rotary shaker at 130 rpm for 6 days at 20 °C.
Cultured mycelia were inoculated into a 3-L working
volume in a 5-L jar fermentor (B. E. Marubishi Co.,
Ltd., Japan) of 165-mm diameter and 265-mm height.
Fermentation was carried out at 50 rpm using a stan-
dard turbine-type impeller at 20 °C and an aeration rate
of 1.5 vvm for 5 days. Mycelial cultures were lyophi-
lized before measuring enzyme activity.
2
0% SDS-PAGE gels. Protein spots that confirmed
active fractions were excised from 2D electrophoresis
gels. These excised proteins were purified and sub-
jected to in-gel trypsin digestion according to a pre-
Results
O-methyltransferase activity assays
1
3)
viously reported method.
Methylation activity for EGCG was determined in
mycelial cultures of edible mushroom. In these experi-
ments, EGCG3″Me, EGCG4″Me, and EGCG3″,5″diMe
peaks were detected in F. velutipes crude enzyme
preparations at retention times that matched those of
O-methylated EGCGs’ standards (Fig. 2). Theoretical
values of molecular weights for these O-methylated
EGCGs were confirmed using LC–TOF-MS. No peaks
corresponding to O-methylated EGCGs were detected
in enzyme extracts from any of the other mushroom
species.
LC–MS/MS peptide sequence analysis.
Purified
protein samples from SDS-PAGE or 2D gel electropho-
resis were analyzed using LC–MS/MS. LC–MS/MS
was performed using a nano-LC system paradigm
AMC Inc., Camden) with a MS system LTQ (Thermo
Fisher Scientific K.K., Japan). LC–MS/MS was per-
formed using a Magic C18, 3-μm, 200-Å column
(
(
0.2 mm i.d. × 50 mm, Michrom Bioresources, CA) at a
−
1
flow rate of 1.5 μL min . Mixture of A (0.1% (v/v)
formic acid/2% (v/v) acetonitrile) and B (0.1% (v/v)
formic acid/90% (v/v) acetonitrile were used as the
mobile phase. The initial eluent was 5% mobile phase
B, followed by a linear gradient from 5 to 45% B for
Enzyme purification and peptide sequence analyses
Enzyme purification protocols are summarized in
Table 1. After sonication, supernatants from mycelial
cultures were fractionated using 40%–80% ammonium
sulfate saturation in 10% increments. After desalting,
enzyme activity was determined in each fraction.
2
0 min. Survey full scan spectra were acquired in the
m/z range of 400–2000. Data were analyzed using Bio-
works software version 3.1 (Thermo Fisher Scientific
K.K., Japan).