Journal of Medicinal Chemistry
Article
1
1
7
6
2
4
(
1
1
H, J = 7.8, aip-9H), 7.58−7.45 (m, 3H, aip-6H, ph -3′,5′H), 7.26−
sulfate, and concentrated in vacuum. The obtained solid was purified
1
.20 (d, 1H, J = 7.2, ph -4′H), 7.08−7.0 (dd, 1H, J = 7.1, aip-8H),
by column chromatography (methylene chloride/NH methanol =
3
.58 (s, 2H, aip-NH ), 4.16−4.07 (t, 2H, J = 6.3, prop-1″H ), 4.01 (s,
95:5) and washed one night in hexane.
2
2
H, aip-5H ), 2.62−2.53 (t, 2H, J = 6.7, prop-3″H ), 2.49−2.37 (m,
2-Amino-4-(4-(3-(piperidin-1-yl)propoxy)phenyl)-5H-indeno[1,2-
2
2
1
H, pyr-5″, 8″H ), 1.99−1.85 (q, 2H, J = 5.6, prop-2″H ), 1.76−1.59
d]pyrimidin-5-one (7). Yield: 73%; mp 100.5 °C. H NMR (300
2
2
1
3
1
m, 4H, pyr-6″, 7″H ). C NMR (75 MHz, DMSO-d ): δ 168.9,
MHz, DMSO-d
aip-NH
aip-8,9H), 4.18−4.04 (t, 2H, J = 6.4, prop-1″H
= 5.8, prop-3″H ), 2.38−2.20 (m, 4H, pip-5″, 9″H
2H, J = 6.0, prop-2″H ), 1.60−1.45 (m, 4H, pip-6″, 8″H
6
): δ
H
8.18−8.08 (m, 2H, ph -2′,6′H), 7.93 (s, 2H,
2
6
C
1
63.6, 160.9, 158.8, 148.3, 138.0, 131.4, 129.5, 128.3, 128.1, 122.2,
2
), 7.83−7.61 (m, 4H, aip-6,7H, ph -3′,5′), 7.10−7.0 (m, 2H,
), 2.48−2.39 (t, 2H, J
), 1.96−1.82 (q,
), 1.44−1.32
187.6, 175.8,
18.1, 114.3, 110.9, 66.1, 55.0, 54.1, 34.09, 28.09, 23.07. ESI-HRMS
m/z: calcd for C H N O (MH ), 387.2185; found, 387.2177.
HPLC: 96.3%.
-(3-(Piperidin-1-yl)propoxy)-4-(4-(3-(piperidin-1-yl)propoxy)-
phenyl)-5H-indeno[1,2-d]pyrimidin-2-amine (3). Yield: 66%; mp
2
+
2
4
26
4
2
2
2
2
1
3
7
(m, 2H, pip-7″H ). C NMR (75 MHz, DMSO-d ): δ
2 6 C
164.7, 164.0, 161.0, 139.4, 136.2, 134.0, 132.8, 131.4, 127.8, 122.9,
1
1
65.3 °C. H NMR (300 MHz, DMSO-d ): δ 8.16−8.05 (m, 2H,
120.7, 113.4, 110.1, 66.1, 55.0, 54.0, 26.2, 25.5, 24.1. ESI-HRMS m/z:
6
H
1
+
ph -2′,6′H), 7.60−7.51 (m, 1H, aip-9H), 7.42−7.32 (d, 1H, J = 7.4,
calcd for C H N O (MH ), 415.2134; found, 415.2132. HPLC:
2
5
26
4
2
1
aip-6H), 7.18−7.03 (m, 3H, ph -3′,5′H, aip-8H), 6.58 (s, 2H, aip-
96.3%.
1
NH ), 4.18−4.05 (t, 4H, J = 6.5, prop/prop -1″H ), 4.03 (s, 2H, aip-
2-Amino-7-(3-(pyrrolidin-1-yl)propoxy)-4-phenyl-5H-indeno[1,2-
2
2
1
1
1
5
1
6
1
1
H ), 2.48−2.23 (m, 12H, prop/prop -3″H , pip/pip -5″, 9″H ),
d]pyrimidin-6-one (8). Yield: 76%; mp 145.3 °C. H NMR (300
2
2
2
1
1
1
.83−1.61 (m, 4H, prop/prop -2″H ), 1.44−1.30 (m, 12H, pip/pip -
MHz, DMSO-d
aip-NH
6
): δ
H
= 8.05−7.96 (m, 2H, ph -2′,6′H), 7.94 (s, 2H,
2
13
″, 7″, 8″H ). C NMR (75 MHz, CDCl ): δ 169.7, 163.0, 160.3,
2
), 7.73−7.64 (d, 1H, J = 7.7, aip-9H), 7.60.7.44 (m, 3H, aip-
2
3
C
1
1
60.2, 158.7, 140.0, 138.1, 129.9, 128.5, 124.9, 119.0, 114.4, 106.3,
6H, ph -3′,5′H), 7.24−7.18 (dd, 1H, J = 7.2, ph -4′H), 7.18−7.11 (d,
1H, J = 7.2, aip-8H), 4.22−4.06 (t, 2H, J = 6.4, prop-1″H ), 2.64−
2.53 (t, 2H, J = 5.3, prop-3″H ), 2.49−2.41 (m, 4H, pyr-5″, 8″H ),
2.01−1.85 (q, 2H, J = 6.7, prop-2″H ), 1.79−1.58 (m, 4H, pyr-6″,
). C NMR (75 MHz, DMSO-d ): δ 187.0, 175.7, 164.9,
05.6, 66.6, 55.8, 54.4, 54.3, 34.1, 26.1, 25.2, 23.9. ESI-HRMS m/z:
calcd for C H N O (M2H ), 543.3573; found, 543.3574. HPLC:
2
+
33
43
5
2
2
2
96.7%.
2
1
3
4
-Phenyl-8-(3-(pyrrolidin-1-yl)propoxy)-5H-indeno[1,2-d]-
7″H
2
6
C
1
pyrimidin-2-amine (ST2001). Yield: 70%; mp 140.5 °C. H NMR
164.3, 162.7, 138.7, 135.7, 131.3, 130.6, 129.3, 127.6, 122.5, 119.6,
1
(
300 MHz, DMSO-d ): δ 8.14−8.04 (m, 2H, ph -2′,6′H), 7.60−
110.6, 108.8, 66.6, 53.5, 51.9, 27.8, 23.0. ESI-HRMS m/z: calcd for
6
H
1
1
+
7
4
4
2
2
7
1
1
.47 (m, 4H, aip-6,9H, ph -3′,5′H), 7.42−7.36 (d, 1H, J = 7.4, ph -
C H N O (MH ), 401.1978; found, 401.1976. HPLC: 97.5%.
2
4
24
4
2
′H), 7.14−7.06 (dd, 1H, J = 7.1, aip-7H), 6.66 (s, 2H, aip-NH ),
2-Amino-7-(3-(piperidin-1-yl)propoxy)-4-(4-(3-(piperidin-1-yl)-
2
.16−4.08 (t, 2H, J = 6.4, prop-1″H ), 4.02 (s, 2H, aip-5H ), 2.65−
propoxy)phenyl)-5H-indeno[1,2-d]pyrimidin-5-one (9). Yield: 62%;
2
2
1
.55 (t, 2H, J = 6.8, prop-3″H ), 2.55−2.39 (m, 4H, pyr-5″, 8″H ),
mp 116.5 °C. H NMR (300 MHz, DMSO-d ): δ 8.16−8.06 (m,
6 H
1
2
2
.01−1.85 (q, 2H, J = 5.9, prop-2″H ), 1.75−1.61 (m, 4H, pyr-6″,
2H, ph -2′,6′H), 7.80 (s, 1H, aip-NH ), 7.63−7.55 (d, 1H, J = 7.6,
2
2
13
″H ). C NMR (75 MHz, DMSO-d ): δ 168.9, 163.6, 159.6,
aip-9H), 7.25−7.19 (d, 1H, J = 7.2, aip-6H), 7.15−7.07 (dd, 1H, J =
2
6
C
1
58.2, 140.1, 138.0, 137.8, 129.7, 128.4, 128.2, 126.2, 119.6, 118.4,
7.1, aip-8H), 7.06−6.96 (m, 2H, ph -3′,5′H), 4.24−4.12 (t, 2H, J =
1
04.9, 66.1, 53.5), 52.1, 33.3, 28.0, 23.0. ESI-HRMS m/z: calcd for
C H N O (MH ), 387.2185; found, 387.2186. HPLC: 97.3%.
6.5, prop -1″H
2
), 4.12−4.00 (t, 2H, J = 6.5, prop-1″H ), 2.47−2.38
2
+
1
1
(m, 4H, prop/prop -3″H
2.02−1.81 (m, 4H, prop/prop -2″H
6″, 8″H ), 1.43−1.27 (m, 4H, pip/pip -7H ″). C NMR (75 MHz,
), 2.38−2.17 (m, 8H, pip/pip -5″, 9″H
),
24
26
4
2
2
1
1
4
-Phenyl-7-(3-(piperidin-1-yl)propoxy)-5H-indeno[1,2-d]-
2
), 1.58−1.44 (m, 8H, pip/pip -
1
1 13
pyrimidin-2-amine (5). Yield: 50%; mp 176.3 °C. H NMR (300
2
2
1
MHz, DMSO-d ): δ 8.17−8.08 (dd, 2H, J = 8.1, ph -2′,6′H), 7.90−
DMSO-d ): δ 187.0, 174.9, 164.6, 163.6, 163.4, 160.9, 142.1, 131.5,
6
H
6 C
1
7
7
8
4
2
1
.82 (d, 1H, J = 7.8, aip-9H), 7.66−7.51 (m, 3H, aip-6H, ph -3′,5′H),
128.5, 127.8, 124.9, 118.2, 113.4, 111.0, 106.2, 67.1, 66.0, 55.0, 54.8,
1
.31−7.24 (d, 1H, J = 7.3, ph -4′H), 7.15−7.05 (dd, 1H, J = 7.1, aip-
54.0, 26.1, 25.9, 25.4, 24.0. ESI-HRMS m/z: calcd for C H N O
(MH ), 556.3288; found, 556.3279. HPLC: 97.2%.
3
3
41
5
3
+
H), 6.63 (s, 2H, aip-NH ), 4.20−4.13 (t, 2H, J = 6.2, prop-1″H ),
2
2
.12 (s, 2H, aip-5H ), 2.51−2.42 (t, 2H, J = 6.9, prop-3″H ), 2.41−
2-Amino-8-(3-(pyrrolidin-1-yl)propoxy)-4-phenyl-5H-indeno[1,2-
2
2
1
.28 (m, 4H, pip-5″, 9″H ), 2.02−1.88 (q, 2H, J = 5.9, prop-2″H ),
d]pyrimidin-5-one (10). Yield: 75%; mp 144.5 °C. H NMR (300
2
2
C
1
3
1
.61−1.49 (m, 4H, pip-6″, 8″H ), 1.48−1.37 (m, 2H, pip-7″H ).
MHz, DMSO-d
aip-NH
6
): δ
H
= 8.05−7.97 (m, 2H, ph -2′, 6′H), 7.90 (s, 2H,
2
2
NMR (75 MHz, DMSO-d ): δ 168.9, 163.6, 160.9, 158.8, 148.3,
2
), 7.62−7.56 (d, 1H, J = 7.6, aip-6H), 7.56−7.45 (m, 3H, aip-
6
C
1
1
1
5
38.0, 131.3, 129.5, 128.3, 128.1, 122.2, 118.1, 114.3, 110.9, 66.2,
5.0, 54.0, 34.0, 26.2, 25.5, 24.1. ESI-HRMS m/z: calcd for
C H N O (M2H ), 402.2420; found, 402.2412. HPLC: 96.5%.
-Phenyl-8-(3-(piperidin-1-yl)propoxy-5H-indeno[1,2-d]-
pyrimidin-2-amine (6). Yield: 44%; mp 142.1 °C. H NMR (300
9H, ph -3′, 5′H), 7.27−7.22 (d, 1H, J = 7.2, ph -4′H), 7.16−7.09 (dd,
1H, J = 7.1, aip-7H), 4.25−4.11 (t, 2H, J = 6.4, prop-1″H ), 2.59−
2.51 (t, 2H, J = 6.8, prop-3″H ), 2.48−2.38 (m, 4H, pyr-5″, 8″H ),
1.99−1.86 (q, 2H, J = 5,8, prop-2″H ), 1.75−1.61 (m, 4H, pyr-6″,
2
+
25
28
4
2
2
4
2
1
13
7″H ). C NMR (75 MHz, DMSO-d ): δ 186.5, 174.8, 164.8,
2
6
C
1
MHz, DMSO-d ): δ 8.15−8.03 (m, 2H, ph -2′,6′H), 7.61−7.47 (m,
164.0, 163.6, 142.1, 135.6, 130.6, 129.5, 128.6, 128.2, 124.9, 118.3,
6
H
1
1
4
7
2
6
H, aip-6,9H, ph -3′,5′H), 7.41−7.35 (d, 1H, J = 7.4, ph -4′H), 7.16−
111.5, 106.3, 66.8, 53.5, 52.0, 29.9, 23.0. ESI-HRMS m/z: calcd for
+
.05 (dd, 1H, J = 7.1, aip-7H), 6.66 (s, 2H, aip-NH ), 4.12−4.05 (t,
C H N O (MH ), 401.1978; found, 401.1972. HPLC: 97.1%.
2
24 24
4
2
H, J = 6.4, prop-1″H ), 4.03 (s, 2H, aip-5H ), 2.45−2.38 (t, 2H, J =
2-Amino-7-(3-(piperidin-1-yl)propoxy)-4-phenyl-5H-indeno[1,2-
2
2
1
.8, prop-3″H ), 2,36−2.25 (m, 4H, pip-5″, 9″H ), 1.97−1.84 (q, 2H,
d]pyrimidin-6-one (11). Yield: 79%; mp 182.2 °C. H NMR (300
2
2
1
J = 5.8, prop-2″H ), 1.57−1.43 (m, 4H, pip-6″, 8″H ), 1.43−1.31 (m,
MHz, DMSO-d
aip-NH
6
): δ
H
= 8.02−7.96 (m, 2H, ph -2′, 6′H), 7.96 (s, 2H,
2
2
1
3
2
1
1
H, pip-7″H ). C NMR (75 MHz, DMSO-d ): δ 168.9, 163.6,
2
), 7.71−7.65 (d, 1H, J = 7.7, aip-9H), 7.58−7.45 (m, 3H, aip-
2
6
C
1
1
59.6, 158.0, 140.1, 137.9, 137.8, 129.7, 128.4, 128.2, 126.2, 119.6,
6H, ph -3′, 5′H), 7.23−7.16 (dd, 1H, J = 7.2, ph -4′H), 7.16−7.12 (d,
1H, J = 7.2, aip-8H), 4.18−4.07 (t, 2H, J = 6.4, prop-1″H ), 2.47−
2.25 (m, 6H, prop-3″H , pip-5″, 9″H ), 1.96−1.82 (q, 2H, J = 5.8,
prop-2″H ), 1.55−1.44 (m, 4H, pip-6″, 8″H ), 1.43−1.31 (m, 2H,
): δ 187.0, 175.7, 164.9,
18.4, 104.9, 66.2, 55.1, 54.0, 33.3, 26.2, 25.6, 24.1. ESI-HRMS m/z:
calcd for C H N O (MH ), 401.2341; found, 401.2339. HPLC:
7.1%.
General Procedure for the Synthesis of 3-Piperidino/
Pyrrolidinopropyloxy Carbonyl Arylindenopyrimidine Deriv-
Derivatives 1−6 (1 equiv) and sodium hydroxide
1.2 equiv) were suspended in dimethylformamide. The resulting
2
+
24
26
4
2
2
9
2
2
1
3
pip-7″H
). C NMR (75 MHz, DMSO-d
2
6
C
164.3, 162.7, 138.7, 135.7, 131.3, 130.6, 129.3, 127.6, 122.4, 119.6,
42,43
atives (7−12).
(
110.6, 108.8, 66.7, 54.8, 53.9, 25.9, 25.4, 23.9. ESI-HRMS m/z: calcd
+
for C H N O (MH ), 415.2134; found, 415.2126. HPLC: 96.5%.
2
5
26
4
2
mixture was heated to 80 °C and air was bubbled through the solution
using a steel needle. After 4 h, the reaction was cooled to room
temperature, and the crude product was taken up in dichloromethane
and sodium carbonate. The organic phase was then washed several
times with saturated NaCl solution and water, dried over magnesium
2-Amino-8-(3-(piperidin-1-yl)propoxy)-4-phenyl-5H-indeno[1,2-
1
d]pyrimidin-5-one (ST-1992). Yield: 74%; mp 176.6 °C. H NMR
1
(300 MHz, DMSO-d ): δ 8.05−7.97 (m, 2H, ph -2, 6H), 7.96−7.81
6
H
(s, 2H, pyrim-NH ), 7.62−7.57 (d, 1H, J = 7.6, ph-6H), 7.57−7.45
2
1
1
(m, 3H, ph-9H, ph -3, 5H), 7.26−7.22 (d, 1H, J = 7.2, ph -4H),
8
256
J. Med. Chem. 2021, 64, 8246−8262