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  • Online SMILES Translator and Structure File
  • [Usage] Input Format:  your own SMILES strings or create a SMILES string using the Structure Editor. OR your own files. The service will automatical
  • Norgwyn Montgomery Software
  • Their molecuar modeling and chemical database software was developed by working industrial research chemists. They are involved in the synthesis of new compounds, in designing form
  • NCI-3D Database, NLM, NIH (213628 Records)
  • 3D Chemical Structure Searching: NCI-3D Provided by the Specialized Information Services, U.S. National Library of Medecine, NIH. NCI-3D have 21,3628 compounds wi
  • MOLMOL (MOLecule analysis and MOLecule display)
  • MOLMOL is a molecular graphics program for display, analysis, and manipulation of three-dimensional structures of biological macromolecules, with special emphasis on nuclear magnet
  • Molecular Networks GmbH
  • The company's suite of chemoinformatics applications covers many different areas including: handling of chemical information, design of new chemical entities and prediction of phys
  • MODEL - Molecular Descriptor Lab
  • The 3D structure MUST be provided in PDB/MDL/MOL2/COR format.
  • JMV
  • JMV is a molecular viewer written in Java and Java3D. JMV is designed to be an easy-to-use platform neutral molecular visualization tool, which can be used standalone or integrated
  • Jmol
  • Jmol was originally intended to be a fully functional replacement for XMol which was a molecular viewing program developed at the Minnesota Supercomputer Center. Although the progr
  • JME Molecular Editor
  • JME Molecular Editor is a Java program which allows to draw, edit, and display molecules and reactions in a stand-alone mode or as an applet directly within an HTML page. The Edito
  • Interactive 2D to 3D Molecular Converter and Viewer at MolSoft, LLC
  • Interactive 2D to 3D Molecular Converter and Viewer
  • GPU Acceleration of Molecular Modeling Applications
  • Modern graphics processing units (GPUs) contain hundreds of arithmetic units and can be harnessed to provide tremendous acceleration for many numerically intensive scientific appli
  • Gezelter Lab
  • The groups research is concerned with structural and dynamic processes in condensed phase systems like liquids, glasses, biological membranes and nanoparticles. An understanding of
  • DRAGON
  • DRAGON is a well-known software for the calculation of more than 1600 molecular descriptors from several input formats (MDL, SYBYL, HyperChem, Smiles).  dragonX for L
  • DIMENSION 5
  • DIMENSION 5 provides advanced visualization, sonification and speech technologies for interactive data analysis, real-time data mining and for visual navigation through complex inf
  • Database of Simulated Molecular Motions (DSMM)
  • The purpose of this database is to provide an easily-searchable source of information about movies showing biomolecular motions that have been generated by computer simulation. All
  • Data Book of Molecules
  • About 800 molecular models can be viewed, and rotated on PC with the free Chemscape Chime plug-in.  Data Book of Molecules was developed for educational purposes. Mos
  • Converter of SMILES, InChI, Mol file to 2D drawing
  • www.InChI.info is a website dedicated to the International Chemical Identifier InChI. The site was openned by Beda Kosata, the author of BKchem - a free chemical drawing program.
  • ChemPen3D
  • Create 3D drawings using the same easy mouse and menu driven methods of ChemPen. ChemPen3D uses a modified version of the popular modified DREIDING molecular mechanics force field
  • ChemMine
  • ChemMine is a compound mining database that facilitates drug and agrochemical discovery and chemical genomics screens. The associated publication is available in Plant Physiol: 138
  • Chemistry Development Kit (CDK)
  • The CDK classes are Java utitility classes for ChemoInformatics and Computational chemistry, written in Java. They are developed constantly developed parallel to other projects tha
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