Synthesis of Tri- to Hexasaccharide Fragments of Shigella flexneri
1
7:3); H NMR (CDCl3) δ 8.72 (s, 1H, NH), 7.42-7.29 (m, 15H,
(5 mL) containing 4Å MS (620 mg), stirred at 0 °C. After 45 min,
TLC (Tol/EtOAc, 75:25; Chex/EtOAc, 1:1) showed the presence
of a single less polar product. Et3N (0.2 mL) was added and the
mixture was filtered, and concentrated to dryness. Chromatography
of the residue (Tol/EtOAc, 75:25 f 1:1) gave 45 (149 mg, 65%)
as a white foam slightly contaminated. Hexasaccharide 45 had Rf
CHPh), 6.22 (d, 1H, J1,2 ) 1.9 Hz, H-1C), 5.48 (dd, 1H, J1,2 ) 1.8
Hz, H-2B), 5.31 (dd, 1H, H-2C), 5.10 (d, 1H, H-1B), 4.92 (d, 1H, J
) 11.0 Hz, HBn), 4.85 (d, 1H, J ) 10.8 Hz, HBn), 4.68-4.62 (m,
3H, HBn), 4.51 (d, 1H, J ) 11.3 Hz, HBn), 4.26 (dd, 1H, J2,3 ) 3.3
Hz, J3,4 ) 9.5 Hz, H-3C), 3.96 (dq, 1H, J4,5 ) 9.5 Hz, H-5C), 3.89
1
(dd, 1H, J2,3 ) 3.3 Hz, J3,4 ) 9.3 Hz, H-3B), 3.82 (dq, 1H, J4,5
)
) 0.55 (Chex/EtOAc, 1:1); H NMR (CDCl3) δ 7.47-7.06 (m,
9.4 Hz, H-5B), 3.58 (pt, 1H, H-4C), 3.44 (pt, 1H, H-4B), 2.72 (m,
4H, 4HLev), 2.18 (s, 3H, CH3Lev), 2.17 (s, 3H, HAc), 1.36 (d, 3H,
J5,6 ) 6.2 Hz, H-6C), 1.29 (d, 3H, J5,6 ) 6.2 Hz, H-6B); 13C NMR
(CDCl3) δ 206.5 (CLev), 172.3 (CLev), 170.3 (CAc), 160.5 (C)NH),
138.8-138.0 (CPh), 129.2-127.9 (CHPh), 99.9 (C-1B, 1JCH ) 168.1
Hz), 94.5 (C-1C, 1JCH ) 178.7 Hz), 91.2 (CCl3), 80.2 (C-4C), 80.1
(C-4B), 77.9 (C-3B), 76.5 (C-3C), 76.1, 75.7, 72.0 (3C, CBn), 71.2
(C-2C), 71.1 (C-5C), 69.6 (C-2B), 69.1 (C-5B), 38.4 (CH2Lev), 30.2
(CH3Lev), 28.5 (CH2Lev), 21.3 (CAc), 18.4, 18.3 (2C, C-6B, C-6C).
Allyl (3,4-Di-O-benzyl-2-O-levulinoyl-r-L-rhamnopyranosyl)-
(1f3)-(2-O-acetyl-4-O-benzyl-r-L-rhamnopyranosyl)-(1f3)-(2-
acetamido-2-deoxy-4,6-O-isopropylidene-ꢀ-D-glucopyranosyl)-
(1f2)-[2,3,4,6-tetra-O-benzyl-r-D-glucopyranosyl-(1f3)]-4-O-
benzyl-r-L-rhamnopyranoside (44). TfOH (23 µL, 263 µmol, 0.9
equiv) was added to a solution of trisaccharide acceptor 40 (310
mg, 290 µmol) and trichloroacetimidate 23 (379 mg, 440 µmol,
1.5 equiv) in toluene (10 mL) containing 4Å MS (1.7 g), stirred at
0 °C. After 15 min, TLC (Chex/EtOAc, 1:1) showed the presence
of a single more polar product. Et3N (0.2 mL) was added. The
mixture was filtered, and concentrated to dryness. Chromatography
of the residue (Tol/EtOAc, 8:2 f 6:4) gave 44 (383 mg, 74%) as
a white foam slightly contaminated. Pentasaccharide 44 had Rf )
0.35 (Chex/EtOAc, 1:1); 1H NMR (CDCl3) δ 7.45-7.07 (m, 40H,
CHPh), 6.47 (d, 1H, JNH,2 ) 9.0 Hz, NH), 5.90 (m, 1H, CH)), 5.46
(dd, 1H, J2,3 ) 3.0 Hz, H-2B), 5.29 (m, 1H, Jtrans ) 17.2 Hz, dCH2),
5.20 (m, 1H, Jcis ) 10.4 Hz, dCH2), 5.15 (d, 1H, J1,2 ) 3.5 Hz,
H-1E), 5.09-4.98 (m, 5H, H-1B, HBn), 4.94 (dd, 1H, J1,2 ) 2.1 Hz,
J2,3 ) 2.7 Hz, H-2C), 4.93-4.88 (m, 3H, HBn), 4.84 (bs, 1H, H-1A),
4.79-4.77 (bs, 2H, H-1C, HBn), 4.67-4.60 (m, 5H, HBn), 4.52 (d,
1H, J ) 11.0 Hz, HBn), 4.42 (d, 1H, J ) 11.4 Hz, HBn), 4.35 (d,
1H, J ) 11.9 Hz, HBn), 4.28 (d, 1H, J1,2 ) 8.6 Hz, H-1D), 4.21-4.13
50H, CHPh), 6.38 (d, 1H, JNH,2 ) 9.1 Hz, NH), 5.86 (m, 1H, CH)),
5.44 (dd, 1H, J2,3 ) 3.2 Hz, H-2B′), 5.26 (m, 1H, Jtrans ) 17.2 Hz,
dCH2), 5.21-5.17 (m, 2H, dCH2, H-1E), 5.07 (d, 1H, J1,2 ) 1.6
Hz, H-1A), 5.05 (d, 1H, J1,2 ) 1.8 Hz, H-1B′), 5.04-4.87 (m, 9H,
4HBn, H-2C, 2HBn), 4.84 (d, 2H, J ) 11.2 Hz, HBn), 4.78 (d, 1H, J
) 10.2 Hz, HBn), 4.75 (d, 1H, J1,2 ) 1.4 Hz, H-1B), 4.70 (bs, 1H,
H-1C), 4.68-4.57 (m, 9H, HBn), 4.50 (d, 1H, J ) 11.0 Hz, HBn),
4.41 (d, 1H, J ) 11.3 Hz, HBn), 4.35 (d, 1H, J ) 12.0 Hz, HBn),
4.28 (d, 1H, J1,2 ) 8.6 Hz, H-1D), 4.21-4.08 (m, 6H, H-3E, H-5E,
H-2D, H-3A, HAll, H-3C), 3.99 (dd, 1H, J2,3 ) 2.6 Hz, H-2A),
3.96-3.84 (m, 7H, H-5C, H-2B, HAll, H-3B, H-3B′, H-2E, H-4E),
3.81-3.73 (m, 2H, H-5A, H-5B′), 3.71 (dq, 1H, J4,5 ) 9.4 Hz, J5,6
) 6.2 Hz, H-5B), 3.54-3.38 (m, 8H, H-6aD, H-6bD, H-6aE, H-6bE,
H-4A, H-4B, H-4D, H-4C, H-4B′), 2.75-2.64 (m, 6H, H-5D, 4HLev
,
H-3D), 2.31 (s, 3H, HNAc), 2.18 (s, 3H, CH3Lev), 2.05 (s, 3H, HAc),
1.42 (s, 3H, HiPr), 1.39 (s, 3H, HiPr), 1.35-1.31 (m, 9H, H-6A, H-6B,
H-6B′), 1.24 (d, 3H, J5,6 ) 6.2 Hz, H-6C); 13C NMR (CDCl3) δ
206.1 (CLev), 171.7 (CLev), 170.4 (CAc), 170.0 (CNAc), 138.6-137.5
(CPh), 133.8 (CH)), 129.3-127.7 (CHPh), 117.1 (dCH2), 103.6
(C-1D, 1JCH ) 159.0 Hz), 101.1 (C-1A, 1JCH ) 172.8 Hz), 99.5 (C-
1
1
1B′, JCH ) 167.8 Hz), 99.2 (CiPr), 97.9 (C-1B, JCH ) 172.8 Hz),
97.8 (C-1C, 1JCH ) 172.8 Hz), 94.2 (C-1E, 1JCH ) 165.3 Hz), 83.4
(C-3E), 80.5 (C-3D), 80.4 (C-4B), 80.2 (C-2E), 80.1 (C-4B′), 80.0
(C-4C), 79.8 (C-4A), 79.2 (C-3B), 78.5 (C-4E), 78.2 (C-3C), 77.9
(C-3B′), 76.2 (C-2A), 76.1, 75.7, 75.4 (3C, CBn), 75.3 (C-2B), 75.2,
75.1, 75.0, 74.5 (4C, CBn), 74.5 (C-3A), 73.5 (CBn), 73.2 (C-2C),
72.1 (C-4D), 71.9, 71.4 (2C, CBn), 70.0 (C-5E), 69.3 (C-2B′), 68.9
(C-5A), 68.5 (C-5B′), 67.9 (C-6E), 67.8 (C-5B), 67.7 (CAll), 67.3 (C-
5C), 67.2 (C-5D), 62.0 (C-6D), 55.0 (C-2D), 38.1 (CH2Lev), 29.8
(CH3Lev), 29.2 (CiPr), 28.2 (CH2Lev), 24.1 (CNAc), 21.0 (CAc), 19.1
(CiPr), 18.0, 17.9, 17.8, 17.7 (4C, C-6A, C-6B, C-6B′, C-6C); HRMS
(ESI+) for C121H141NO30 ([M + H]+, 2088.9617) found m/z
2088.9619, ([M + Na]+, 2110.9436) found m/z 2110.9497.
(m, 6H, H-3E, H-2D, H-5E, H-3C, HAll, H-3A), 4.00 (dq, 1H, J4,5
9.6 Hz, H-5C), 3.97-3.83 (m, 6H, HAll, H-3B, H-2E, H-2A, H-4E,
H-6aD), 3.79 (dq, 1H, J4,5 ) 9.4 Hz, H-5B), 3.73 (bd, 1H, J5,6b
)
)
Allyl (2-Deoxy-4,6-O-isopropylidene-2-trichloroacetamido-3-
O-trimethylsilyl-ꢀ-D-glucopyranosyl)-(1f2)-[2,3,4,6-tetra-O-ben-
zyl-r-D-glucopyranosyl-(1f3)]-4-O-benzyl-r-L-rhamnopyrano-
side (47). TMSOTf (61.0 µL, 340 µmol, 0.3 equiv) was added to a
solution of acceptor 27 (1.3 g, 1.1 mmol) and trichloroacetimidate 23
(1.5 g, 1.7 mmol, 1.5 equiv) in toluene (30 mL) containing 4Å MS
(960 mg), stirred at -78 °C. After 15 min, TLC (Tol/EtOAc, 8:2)
showed the absence of 27. Et3N (0.2 mL) was added and the mixture
was filtered, and concentrated to dryness. Chromatography of the
residue (Tol/EtOAc, 9:1 f 7:3) gave first 47 (233 mg, 11%), and
then pentasaccharide 48 (1.1 g, 52%), both as white foams. Trisac-
10.3 Hz, H-6bD), 3.70 (dq, 1H, J4,5 ) 9.5 Hz, H-5A), 3.52 (pt, 1H,
J3,4 ) J4,5 ) 9.3 Hz, H-4D), 3.58-3.40 (m, 5H, H-4A, H-6aE, H-6bE,
H-4C, H-4B), 2.7-2.68 (m, 6H, H-5D, 4HLev, H-3D), 2.35 (s, 3H,
HNAc), 2.19 (s, 3H, CH3Lev), 2.06 (s, 3H, HAc), 1.48 (s, 3H, HiPr),
1.45 (s, 3H, HiPr), 1.38 (d, 3H, J5,6 ) 6.2 Hz, H-6A), 1.34 (d, 3H,
J5,6 ) 6.2 Hz, H-6B), 1.27 (d, 3H, J5,6 ) 6.2 Hz, H-6C); 13C NMR
(CDCl3) δ 206.1 (CLev), 171.8 (CLev), 170.5 (CAc), 170.1 (CNAc),
138.7-137.5 (CPh), 134.0 (CH)), 129.4-127.8 (CHPh), 117.1
(dCH2), 103.7 (C-1D, 1JCH ) 159.9 Hz), 99.5 (C-1B, 1JCH ) 169.7
Hz), 99.3 (CiPr), 98.4 (C-1A, 1JCH ) 174.4 Hz), 97.5 (C-1C, 1JCH
)
170.6 Hz), 94.4 (C-1E, 1JCH ) 170.1 Hz), 83.5 (C-3E), 80.7 (C-3D),
80.4 (C-2E), 80.1, 80.0 (2C, C-4B, C-4C), 79.8 (C-4A), 78.5 (C-4E),
78.2 (C-3C), 77.9 (C-3B), 76.7 (C-2A), 76.1, 75.9, 75.5, 75.4, 75.1,
75.0 (6C, CBn), 74.8 (C-3A), 73.4 (CBn), 73.3 (C-2C), 72.4 (C-4D),
71.3 (CBn), 70.0 (C-5E), 69.3 (C-2B), 68.6 (C-5A), 68.5 (C-5B), 67.9
(C-6E), 67.8 (CAll), 67.4 (C-5D), 67.3 (C-5C), 62.2 (C-6D), 55.0 (C-
2D), 38.1 (CH2Lev), 29.8 (CH3Lev), 29.2 (CiPr), 28.3 (CH2Lev), 24.1
(CNAc), 21.1 (CAc), 19.1 (CiPr), 17.9, 17.8, 17.7 (3C, C-6A, C-6B,
C-6C); HRMS (ESI+) for C101H119NO26 ([M + H]+, 1762.8098)
found m/z 1762.8198, ([M + Na]+, 1784.7917) found m/z 1784.7988.
Allyl (3,4-Di-O-benzyl-2-O-levulinoyl-r-L-rhamnopyranosyl)-
(1f3)-(2-O-acetyl-4-O-benzyl-r-L-rhamnopyranosyl)-(1f3)-(2-
acetamido-2-deoxy-4,6-O-isopropylidene-ꢀ-D-glucopyranosyl)-
(1f2)-[2,3,4,6-tetra-O-benzyl-r-D-glucopyranosyl-(1f3)]-(4-O-
benzyl-r-L-rhamnopyranosyl)-(1f2)-3,4-di-O-benzyl-r-L-
rhamnopyranoside (45). TMSOTf (18 µL, 100 µmol, 0.9 equiv) was
added to a solution of acceptor 21 (150 mg, 110 µmol) and
trichloroacetimidate 23 (140 mg, 160 µmol, 1.5 equiv) in toluene
1
charide 47 had Rf ) 0.5 (Tol/EtOAc, 8:2); H NMR (CDCl3) δ
7.47-7.08 (m, 26H, NH, CHPh), 5.89 (m, 1H, CH)), 5.32 (m, 1H,
Jtrans ) 17.2 Hz, dCH2), 5.23 (m, 1H, Jcis ) 10.6 Hz, dCH2), 5.12
(d, 1H, J1,2 ) 3.6 Hz, H-1E), 5.11-5.05 (m, 3H, HBn), 4.93 (d, 1H, J
) 12.8 Hz, HBn), 4.86 (d, 1H, J1,2 ) 1.6 Hz, H-1A), 4.83-4.76 (m,
3H, HBn, H-1D, HBn), 4.61-4.56 (m, 2H, HBn), 4.50 (d, 1H, J ) 11.0
Hz, HBn), 4.32 (d, 1H, J ) 12.0 Hz, HBn), 4.22-4.10 (m, 4H, H-3E,
HAll, H-3A, H-5E), 4.08-3.97 (m, 3H, H-2A, H-2D, HAll), 3.90 (dd, 1H,
J5,6a ) 5.3 Hz, J6a,6b ) 10.7 Hz, H-6aD), 3.83-3.72 (m, 4H, H-2E,
H-4E, H-6bD, H-5A), 3.58-3.52 (m, 2H, H-4D, H-4A), 3.45 (dd, 1H,
J5,6a ) 1.5 Hz, J6a,6b ) 10.8 Hz, H-6aE), 3.40 (dd, 1H, J5,6b ) 1.5 Hz,
H-6bE), 3.36 (pt, 1H, J2,3 ) J3,4 ) 9.2 Hz, H-3D), 2.96 (ddd, 1H, J5,6b
) J4,5 ) 9.8 Hz, H-5D), 1.51 (s, 3H, HiPr), 1.45 (s, 3H, HiPr), 1.44 (d,
3H, J5,6 ) 6.2 Hz, H-6A), 0.13 (s, 9H, HSi); 13C NMR (CDCl3) δ 161.7
(CNTCA), 138.7-137.7 (CPh), 134.0 (CH)), 129.1-127.3 (CHPh), 117.1
(dCH2), 101.5 (C-1D, 1JCH ) 163.6 Hz), 99.4 (CiPr), 98.5 (C-1A, 1JCH
) 174.0 Hz), 95.2 (C-1E, 1JCH ) 167.5 Hz), 93.3 (CCl3), 83.3 (C-3E),
79.8 (C-4A), 78.7, 78.6 (2C, C-2E, C-4E), 75.9 (CBn), 75.4 (C-3A), 75.3,
J. Org. Chem. Vol. 74, No. 7, 2009 2667