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X. Hao et al. / Bioorg. Med. Chem. Lett. 21 (2011) 5583–5588
In the course of studying the tendril to surface colony transfor-
collapse method where 5 lL water drops are placed near the edges
mation of B. subtilis, we searched for various inhibitors of this type
of colony expansion. We reasoned that such inhibitors might be
colony-spreading or biofilm inhibitors. There are relatively few
known small molecule biofilm inhibitors in Gram-positive bacte-
ria,9 and apparently few reports of colony-spreading inhibitors.
An exception is described by Ogasa et al.,10 where the widely used
tetrazolium dye, 2,3,5-triphenyltetrazolium chloride (TTC), can
prevent colony overgrowth in enumeration of food and clinical
microbial species.
In this article, we describe experiments that take advantage of
flagella-less mutants of B. subtilis with a hag gene disruption in
an undomesticated parent as described previously.2,11 Lacking fla-
gella, these hag mutants can, apparently, only colonize surfaces by
the sliding mechanism described above. As described herein, we
have found a commercially available small molecule inhibitor of
colony spreading in hag mutants, and have used it as the lead mol-
ecule to synthesize a family of related compounds, and identified a
more potent inhibitor of Bacillus surface colony spreading. This
family of compounds also inhibits the colony spreading of B.
anthracis Sterne, an avirulent strain derived from a pathogenic an-
thrax-causing parent.12
of growing colonies or tendrils.6 Surfactin, a potent lipopeptide
surfactant, is needed for sliding motility in B. subtilis as mentioned
above.
The stereochemistry of the commercial sample of NPG used in
the experiment shown in Figure 1 was not indicated by the sup-
plier, but upon analysis by NMR and chiral HPLC (ChiralcellÒ OD
column), it was found to be a racemic mixture of the anti diastereo-
mer (Fig. 2, compounds 2 and 3). We wished to determine if the
activity of NPG is stereospecific, and therefore synthesized the four
possible isomers by the routes shown in Schemes 1 and 2. The syn-
thesis of the two syn enantiomers began with aldehyde 4, which
was subjected to the List-modification of the Knovenagel conden-
sation15 to provide
sponding allylic alcohol (6) was accomplished with DIBAL-H, and
dihydroxylation with either AD-mix- or AD-mix-b provided the
a,b-unsaturated ester 5. Reduction to the corre-
a
individual syn enantiomers, 1S,2S-NPG (1S-syn-, 7) and 1R,2R-
NPG (1R-syn-, 8), respectively, in high enantiomeric excess.16
The 1R,2S (1R-anti-) and 1S,2R (1S-anti-) NPG isomers 2 and 3
were also prepared starting with aldehyde 4 which was treated
with vinylmagnesium bromide to provide the corresponding allylic
alcohol and then subjected to Sharpless kinetic resolution17 using
Few colony-spreading inhibitors have been described in the lit-
erature, so we tested dozens of compounds for inhibition of surface
colony spreading by a B. subtilis hag gene mutant (DS64). Examples
of its colony spreading phenotypes are shown in Figure 1. The MK
agarose plates used represent a semi-solid medium with complete,
defined nutrients,2 and when inoculated with the hag mutant in
the center and incubated overnight (37 °C), a robust surface colony
forms (Fig. 1, left). However, when the plates contained relatively
either D- or L-diisopropyl tartrate to provide the R- and S-allylic
alcohols, 9 and 10, respectively, in high enantiomeric excess. The
R-allylic alcohol (9) was then subjected to Sharpless asymmetric
epoxidation using
in high enantiomeric excess. Similarly, subjection of S-allylic alco-
hol 10 to Sharpless asymmetric epoxidation using -diisopropyl
L-diisopropyl tartrate to provided epoxide 11
D
tartrate provided epoxide 12 in high enantiomeric excess. Epoxide
opening of 11 and 12 with water under acidic conditions occurred
at the terminal carbon to provide 1R-anti-NPG (2) and 1S-anti-NPG
(3). Related epoxide openings have been studied by Jäger et al.18
and found to also occur at the terminal position. These general
schemes were also used to synthesize analogs of NPG starting with
different aldehydes as described in the Supplementary data.
All 4 NPG isomers were tested on MK agarose plates like those
high levels of commercial nitrophenylglycerol (NPG; 75 l
g mLÀ1),
only surface tendrils form (Fig. 1, right). NPG has long been used
to inhibit the flagella-dependent swarming of Proteus strains (re-
viewed by Williams13), and it is thought to act by disruption of a
signal cascade in these Gram-negative bacteria, also including Ser-
ratia marcescens.14 It was a surprise that a flagellar swarming
inhibitor for Gram-negative bacteria would inhibit flagella-
independent colony-spreading in a Gram-positive bacterium.
This effect of NPG on Bacillus growth on the MK agarose med-
ium was not due to growth inhibition, as measured in MK broth,
or reduction of surfactin release, as measured by a water drop
shown in Figure 1. Each isomer was tested at 75 l
g mLÀ1 as shown
in Figure 3. In this experiment we used a marker-less hag mutant
(DS1677), constructed to eliminate possible polar effects of the
hag strain with an MLS antibiotic marker inserted in strain DS64.
As seen in Figure 3, left, the DS1677 strain produced web-like col-
onies indistinguishable from those produced by DS64 (Fig. 1). Un-
der these conditions, only the 1R-anti-NPG (2) showed substantial
inhibition of surface colony formation (Fig. 3) and as in the case of
commercial NPG, surface tendrils (but not colony formation) are
observed. No surface colony spreading inhibition was evident with
the 1S-anti- or 1S-syn-NPG isomers (3 or 7), and these plates
showed the same behavior as the control with web-like surface
colony formation being observed. Weak activity was visible with
1R-syn-NPG (8), where a much thinner, but entire surface colony
was observed with no distinct tendrils.
Having the four NPG stereoisomers also allowed us to assess the
stereospecificity of NPG inhibition of swarming in Proteus. Using
the plate swarm assay described in the Supplementary data, only
the 1R-anti- (2) and 1R-syn-NPG (8) isomers had activity; at the
levels tested (75
of the 1S-anti- (3) or 1S-syn-NPG (7) isomers (data not shown).
OH
l
g mLÀ1 in the plate) there was no visible effect
OH
OH
O2N
OH OH
OH OH
p-nitrophenylglycerol (NPG, 1)
2
2
3
3
1
1
Figure 1. The film spreading of B. subtilis hag mutant (DS64; Table S1 in the
Supplementary data), but not tendril formation, is inhibited by NPG (1). MK agarose
OH
OH
O2N
O2N
plates with (right) and without (left) 75 l
g mLÀ1 NPG (1) were inoculated in the
2
, 1R,2S- (1R-anti)
3, 1S,2R- (1S-anti)
center with the hag strain and grown for 24 h at 37 °C. These results are typical of
triplicate determinations. Note that tendril growth precedes film formation with
and without NPG.
Figure 2. Stereochemistry of commercial NPG.