K.O. Sampson et al. / Inorganica Chimica Acta 408 (2013) 1–8
3
atom). For 14961 unique reflections (R(int) 0.040) the final aniso-
tropic full matrix least-squares refinement on F2 for 682 variables
converged at R1 = 0.055 and wR2 = 0.109 with a Goodness-of-fit of
1.08. Crystallographic details are summarized in Table 1.
cannula. After stirring for 3 h, the solvent was removed by rotary
evaporation to yield a yellow green residue. Crude product was
washed with an excess of hot water (ꢀ300 mL) and diethyl ether
(25 mL). Yield: 85 mg (76%). Single crystals suitable for X-ray dif-
fraction studies were grown through slow evaporation into 1:1
CH2Cl2:hexane. E1/2 (RuIII/RuII) = 269 mV. +ESI-MS for [C60H52P3S3-
Ru]+: theoretical m/z (z = 1) 1063.1487; observed 1063.1683. Ele-
ment Anal. Calc. for C60H52P4S3F6Ru: C, 59.64; H, 4.35%. Found: C,
2.5. Computational methodology
All computational processes were performed using the GAUSSIAN
09 suite of programs [20]. Density functional theory (DFT) calcula-
tions employed the B3LYP functional which utilizes three parame-
ters Becke Functional (B3) with the Lee–Yang–Parr (LYP)
generalized gradient correlation functional. A mixed basis set, 6-
31 G for carbon, hydrogen, sulfur and phosphorus and LANL2DZ
for ruthenium, was used. Furthermore, all optimized geometries
are genuine minima with no imaginary vibrational frequencies.
The intrinsic coordinates for all calculations were derived from
[Ru-1Ávinyl] [21] with replacement of the vinyl substituent with
the appropriate alkene derived moiety. To determine the barrier
for conversion between the corresponding k and d isomers, the
dihedral angle was frozen between the atoms 105 (carbon), 2 (sul-
fur), 3 (sulfur), and 104 (carbon) during the geometry optimization.
59.9; H, 4.75%. Electronic absorption: kmax (e
, MÀ1 cmÀ1): 367 nm
(6993), 440 nm (shoulder). FT-IR (KBr pellet, cmÀ1) 3052, 2925,
2852, 1434, 1086, 845, 559, 518. 31P{1H} NMR (162 MHz, CD3CN):
d 36.5 (J = 29, 313 Hz, Pax1) 39.5 (J = 29, 313 Hz, Pax2), 54.8 (J = 29,
29 Hz, Peq).
2.6.2. [Ru-1Ácis stilbene][PF6] (2)
To a 40 mL solution of [HNEt3][Ru-1] (100 mg, 0.0935 mmol) in
acetonitrile with cis-stilbene (1.67 mL, 9.35 mmol) was slowly
added to a 30 mL of FcPF6 (0.0619 g, 0.187 mmol) in acetonitrile
via cannula transfer. The mixture was cooled in an ice bath and al-
lowed to stir overnight. The color of solution transformed from yel-
low to yellow-green. The solvent was removed through use of a
rotary evaporator, followed by washing with an excess of hot water
(300 mL) and diethyl ether (100 mL). Yield: 69 mg (57%). E1/2 (RuIII/
RuII) = 361 mV. +ESI-MS for [C68H54P3S3Ru]+: theoretical m/z (z = 1)
1161.1644; observed 1161.1980. Element Anal. Calc. for C68H54P4-
S3F6Ru: C, 62.52; H, 4.17%. Found: C, 63.17; H, 5.63%. Electronic
2.6. Chemical syntheses
2.6.1. [Ru-1Ácyclohexene][PF6] (1)
To a suspension of 100 mg (0.0935 mmol) of [HNEt3][Ru-1] in
40 mL of dry acetonitrile was added 0.947 mL of cyclohexene
(9.35 mmol) via syringe. The solution was cooled in an ice bath,
absorption: kmax (e
, MÀ1 cmÀ1): 366 nm (10093). FT-IR (KBr pellet,
cmÀ1) 3052, 2917, 2848, 1434, 1091, 837, 694, 522. 31P{1H} NMR
and
a
blue solution of ferrocenium hexafluorophosphate
(162 MHz, CD3CN): major isomer (70%) d 35.6 (J = 29, 315 Hz,
(0.0619 mg, 0.187 mmol) in 30 mL of acetonitrile was added via
Pax1) 42.9 (J = 29, 315 Hz, Pax2), 52.5 (J = 29, 29 Hz, Peq); minor iso-
mer (30%) d 35.2 (J = 30, 317 Hz, Pax1) 43.7 (J = 30, 317 Hz, Pax2),
54.0 (J = 30, 30 Hz, Peq).
Table 1
Crystal data and structure refinement for [Ru-1Ácyclohexene]PF6.
2.6.3. [Ru-1Átrans stilbene][PF6] (3)
Empirical formula
Formula weight
T (K)
C61H54Cl2F6P4RuS3
1293.07
100.0
The complex is prepared by the method mentioned above ex-
cept that trans-stilbene (1.69 g, 0.187 mmol) was added instead
of cis-stilbene. Yield: 85 mg (70%). E1/2 (RuIII/RuII) = 337 mV. +ESI-
MS for [C68H54P3S3Ru]+: theoretical m/z (z = 1) 1161.34; observed
1161.17. Element Anal. Calc. for C68H54P4S3F6Ru: C, 62.52; H,
k (Å)
0.71073
Crystal system
Space group
Unit cell dimensions
a (Å)
b (Å)
c (Å)
triclinic
ꢀ
P1
12.4717(6)
12.7535(6)
18.2603(9)
89.638(4)
4.17%. Found: C, 58.63; H, 4.30%. Electronic absorption: kmax (e,
MÀ1 cmÀ1): 370 nm (6811), 441 nm (shoulder). FT-IR (KBr pellet,
cmÀ1) 3040, 2921, 2851, 1484, 1091, 833, 698, 523. 31P{1H} NMR
(162 MHz, CD3CN): major isomer (69%) d 35.6 (J = 30, 303 Hz,
a
(°)
b (°)
74.032(4)
P
ax1) 38.5 (J = 30, 303 Hz, Pax2), 57.9 (J = 30, 30 Hz, Peq); minor iso-
c
(°)
89.193(4)
2792.1(2)
2
1.538
0.664
1320
0.21 Â 0.17 Â 0.04
yellow plate
3.23–30.04
À16 6 h 6 17
À16 6 k 6 17
À24 6 l 6 25
47997
V (Å3)
mer (31%) d 35.2 (J = 30, 318 Hz, Pax1) 43.7 (J = 30, 318 Hz, Pax2),
54.1 (J = 30, 30 Hz, Peq).
Z
Dcalc (Mg/m3)
Absorption coefficient (mmÀ1
F (000)
)
2.6.4. [Ru-1Áphenylacetylene][PF6] (4)
Crystal size (mm3)
Crystal color, habit
To a 100 mg sample of [HNEt3][Ru-1] (0.0935 mmol) in 40 mL
acetonitrile in a Schlenk flask was transferred phenylacetylene
(1.38 mL, 9.35 mmol) via syringe. After addition, the flask was
cooled in an ice bath and a blue solution of FcPF6 (0.0619 mg,
0.0817 mmol) in 30 mL acetonitrile was added. The reaction solu-
tion was stirred overnight after which the solvent was removed
by rotary evaporation to produce a yellow green residue. The res-
idue was washed three times with hot water (ꢀ100 mL) and
diethyl ether (25 mL). The crude product was recrystallized via a
mixture of THF/hexane yielding a yellow solid (49 mg, 42%). E1/2
(RuIII/RuII) = 361 mV. +ESI-MS for [C62H48P3S3Ru]+: theoretical m/z
(z = 1) 1083.1209; observed: 1083.1174. Element Anal. Calc. for
h Range for data collection (°)
Index ranges
Reflections collected
Independent reflections
Completeness to h = 27.62°
Absorption correction
Maximum and minimum transmission
Refinement method
14961 [R(int) = 0.0407]
99.8%
Semi-empirical from equivalents
1.000 and 0.903
Full-matrix least-squares on F2
14961/0/682
1.093
R1 = 0.0549, wR2 = 0.1090
R1 = 0.0992, wR2 = 0.1265
1.799 and À1.603
Data/restraints/parameters
Goodness-of-fit (GOF) on F2
Final R indices [I > 2
R indices (all data)a,b
Largest difference peak and hole (e ÅÀ3
r
(I)]a,b
C
62H48P4S3F6Ru: C, 60.62; H, 3.95. Found: C, 57.32; H, 4.28%. Elec-
tronic absorption: kmax (e
, MÀ1 cmÀ1): 305 nm (6919), 437 nm
)
(shoulder). FT-IR (KBr pellet, cmÀ1) 3052, 2917, 2848, 1434,
1091, 837, 694, 523. 31P{1H} NMR (162 MHz, CD3CN): major isomer
(57%) d 36.5 (J = 30, 312 Hz, Pax1) 42.7 (J = 30, 312 Hz, Pax2), 56.7
a
R1
wR2 = {
GOF = S = {
=
R
||Fo| À |Fc||/
R|Fo|.
[w(Fo À Fc2)2]/
R
[w(Fo2)2]}1/2
;
where
w = q/r
2(Fo2) + (qp)2 + bp.
b
2
R
2
R
[w(Fo À Fc2)2]/(n À p)1/2
.