Journal of Medicinal Chemistry
Brief Article
= 143.5 Hz), 173.94. 31P NMR (121 MHz, CD3OD) δ 16.45. HRMS
(ESI): calcd for C5H11N4O5P − H+, 237.0394; found [(M − H)+],
237.0423.
specificity, recently demonstrated by the Kurz group,13 may
account for this phenomenon.
3-(N-Hydroxyacetamido)-1-(benzamido)propyl-phosphonic
Acid (8a). To a solution of 27a (309 mg, 0.53 mmol) in a mixture of
MeOH−H2O−t-BuOH (10 mL) was added 10% Pd/C. Hydrogen gas
was bubbled through via a glass capillary at atmospheric pressure for
3.5 h, after which the reaction mixture was filtered and concentrated in
vacuo. The residue was taken up in t-BuOH, frozen, and lyophilized to
EXPERIMENTAL SECTION
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General Methods and Materials. H, 13C, 19F, and 31P NMR
spectra were recorded in CDCl3, CD3OD, acetone-d6, DMSO-d6, or
D2O on a Varian Mercury 300 spectrometer. Chemical shifts are given
in parts per million (ppm) (δ relative to TMS for H and 13C and to
1
1
external D3PO4 for 31P). All solvents and chemicals were used as
purchased unless otherwise stated. Purity of the final compounds was
assessed by RP-LC-DAD-MS, using a Phenomenex Luna C-18 2.5 μm
particle (100 mm × 2.00 mm) column in a Waters Alliance 2695 XE
HPLC system with quaternary pump, coupled to a DAD detector and
a Waters LCT Premier XE orthogonal time-of-flight spectrometer with
API-ES source with a H2O/CH3CN gradient with 0.05% HCOOH. All
the compounds showed purity above 95%.
give the product as a white foam in quantitative yield. H NMR (300
MHz, CD3OD) δ 1.72−2.11 (m, 3 H), 2.42 (ddd, J = 14.2, 6.6, 3.2 Hz,
1 H), 3.52−3.79 (m, 1 H), 3.90 (d, J = 4.7 Hz, 1 H), 4.34 (t, J = 12.6
Hz, 1 H), 7.23−7.51 (m, 5 H), 7.61 (d, J = 7.0 Hz, 1 H). 13C NMR
(75 MHz, CD3OD) δ 21.53, 26.55, 30.04, 44.60 (d, J = 155.91 Hz),
129.90, 128.12, 130.33, 134.59, 172.20. 31P NMR (121 MHz,
CD3OD) δ 22.53. HRMS (ESI): calcd for C12H17N2O6P − H+,
315.0751; found [(M − H)+], 315.0767.
Dibenzyl 3-(N-(Benzyloxy)acetamido)-1-hydroxy-propyl-
phosphonate (13). Dibenzyl phosphite (4330 mg, 16.5 mmol) was
dissolved in THF (20 mL), the solution was cooled to −78 °C, and
LiHMDS (15 mL of a 1 M solution in THF) was added slowly. After
15 min, a solution of aldehyde 14 (3320 mg, 15 mmol) in 30 mL of
dry THF was added via syringe and the ice bath was removed. After
another 15 min of stirring, the reaction mixture had warmed up to
room temperature, at which point it was quenched by the addition of
saturated aqueous NH4Cl and extracted three times with ethyl acetate.
The combined organic phases were washed with brine, dried over
anhydrous Na2SO4, and evaporated in vacuo. The resulting crude
mixture was purified by dry column vacuum chromatography with a
gradient of ethyl acetate in toluene containing 0.1% formic acid to
ASSOCIATED CONTENT
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S
* Supporting Information
Docking data for analogues 9 and 10a, additional experimental
1
data, and H NMR and 31P spectra for final compounds. This
material is available free of charge via the Internet at http://
AUTHOR INFORMATION
Corresponding Author
*Phone: ++32 9 264.81.24. Fax: ++32 9 264.81.46 . E-mail:
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yield 5.22g (72%) of 13 as an off-white solid. H NMR (300 MHz,
Notes
CDCl3) δ 1.85−2.03 (m, 1 H), 2.05 (s, 3 H), 2.07−2.25 (m, 1 H),
3.56−3.72 (m, 1 H), 3.83−3.96 (m, 1 H), 4.05 (br s, 1 H), 4.57 (br s,
The authors declare no competing financial interest.
1 H), 4.71−4.85 (m, 2 H), 4.98−5.14 (m, 4 H), 7.11−7.42 (m, 15 H).
1
13C NMR (75 MHz, CDCl3) δ 20.32, 29.21, 42.09, 65.02 (d, JC−P
=
ACKNOWLEDGMENTS
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167.0 Hz), 68.01 (d, 2JC−P = 5.8 Hz), 68.10 (d, 2JC−P = 5.8 Hz), 76.43,
127.92, 128.31, 128.50, 128.70, 128.99, 129.19, 134.12, 136.22 (d,
3JC−P = 2.2 Hz), 136.3 (d, 3JC−P = 2.2 Hz), 173.12. HRMS (ESI): calcd
We thank An Matheeussen for running the in vitro
antiplasmodial evaluation. Thomas Verbrugghen is a fellow of
the Agency for Innovation by Science and Technology (IWT)
of Flanders. Financial support by F.W.O.-Vlaanderen is
gratefully acknowledged.
for C26H30NO6P + H+, 484.1884; found [(M + H)+], 484.1852.
3-(N-Hydroxyacetamido)-1-hydroxypropyl-phosphonic
Acid, Ammonium Salt (10a). A mixture of 13 (261 mg, 0.54 mmol),
ammonium formate (520 mg, 8.10 mmol) and 10% Pd/C in MeOH
(10 mL) was heated at reflux for 20 min, followed by filtration over a
glass microfiber pad. The filter was rinsed with methanol and water,
and the filtrate was concentrated in vacuo. The resulting residue was
lyophilized from a mixture of water and t-BuOH to give the product as
an extremely hygroscopic resinous solid in quantitative yield. 1H NMR
(300 MHz, CD3OD) δ 1.67−1.98 (m, 1 H), 2.13 (s, 4 H), 3.46−3.80
(m, 2 H), 3.80−4.12 (m, 1 H). 13C NMR (75 MHz, CD3OD) δ 20.64,
30.98, 46.70 (d, J = 14.9 Hz), 67.99 (d, J = 157.8 Hz). 31P NMR (121
MHz, CD3OD) δ 19.86. HRMS (ESI): calcd for C5H12NO6P − H+,
212.0329; found [(M − H)+], 212.0351.
ABBREVIATIONS USED
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CuAAC, copper catalyzed azide−alkyne cycloaddition; DEAD,
diethyl azodicarboxylate; DIAD, di-isopropyl azodicarboxylate;
DOXP, 1-deoxy-D-xylulose-5-phosphate; DXR, 1-deoxy-D-xylu-
lose-5-phosphate reductoisomerase; EcDXR, Escherichia coli 1-
deoxy-D-xylulose-5-phosphate reductoisomerase; HMDS, bis-
(trimethylsilyl)amine; MEP, 2-C-methyl-D-erythritol-3-phos-
phate; SAR, structure−activity relationship; TMSBr, bromo-
trimethylsilane; TLC, thin layer chromatography
3-(N-Hydroxyacetamido)-1-azidopropylphosphonic Acid,
Bisammonium Salt (9). 24 (165 mg, 0.561 mmol) was coevaporated
with toluene (3 × 10 mL), taken up in acetonitrile (5 mL), and
BSTFA (600 μL, 2.24 mmol) added. After 15 min of stirring at rt, an
ice bath was installed and TMSBr (2.5 mL, 19 mmol) was added. The
ice bath was removed after 10 min, and the reaction was stirred further
at room temperature until, after 2.5 h, 31P NMR confirmed that the
starting phosphonate was completely deprotected (shift from δ = 23−
3 ppm). All volatiles were removed in vacuo, followed by
coevaporation with toluene (3 × 10 mL). The resulting oil was
taken up in acetonitrile, concentrated ammonia was added, and the
mixture was stirred at room temperature for 30 min and evaporated to
give the crude material as a brown oil. This was dissolved in methanol,
decolorized over activated carbon, and lyophilized from water to give
the product as a hygroscopic resin in quantitative yield. 1H NMR (300
MHz, CD3OD) δ 1.63−1.87 (m, 1 H), 2.03−2.35 (m, 4 H), 3.18−
3.37 (m, 1 H), 3.45−3.69 (m, 1 H), 3.88−4.11 (m, 1 H). 13C NMR
(75 MHz, CD3OD) δ 20.57, 28.60, 46.73 (d, J = 13.0 Hz), 59.09 (d, J
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dx.doi.org/10.1021/jm301577q | J. Med. Chem. 2013, 56, 376−380