The Journal of Organic Chemistry
Article
CONCLUSIONS
ASSOCIATED CONTENT
* Supporting Information
Copies of NMR spectra of 3c, 4, and 7. This material is
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S
In summary, for the first time it has been possible through
NMR spectroscopy both to assess isomer purity and to assign
relative configurations of saturated oligoisoprenoids such as 3c.
Recent predictions of the methyl regions of the H and 13C
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AUTHOR INFORMATION
Corresponding Author
Notes
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NMR spectra of all 16 stereoisomers of 3c enabled this
analysis.10 The predicted H NMR spectrum of all-syn-3c is
1
very close to the actual spectrum, but the predicted 13C NMR
spectrum proved to be too simple in one aspect: the three
resonances from the middle methyl groups were predicted to
coincide because they all have the syn/syn relationship, but they
did not. However, the observed differences between predicted
and actual spectra were small compared to the differences
expected for other stereoisomers, so the value of the 13C NMR
predictions was not compromised.
The authors declare no competing financial interest.
ACKNOWLEDGMENTS
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The Groningen group thanks NWO-CW for a VICI grant to
A.J.M. The Pittsburgh group thanks the National Institutes of
Health for funding this work and for funds to help purchase a
700 MHz NMR spectrometer.
The analysis of the synthetic sample of 3c showed that the
all-(S) (all-syn) isomer was indeed the major component,
present to the extent of about 70%. Unexpectedly, a minor
stereoisomer component (or components) was present to the
extent of about 30%. We cannot yet identify the minor
component or pinpoint where it was introduced. However, by
similar comparison of actual and predicted spectra, we could
show that 7 (derived from a key synthetic intermediate 4
bearing four of the five stereocenters) is both pure (>90%) and
has the expected all-(S) configuration. This narrows the source
of the problem to the last few steps of the synthesis.
Perhaps most importantly, the values from the predicted
spectra of compounds like 3c can now be leveraged to related
compounds bearing different right or left ends. As an example,
intermediate 7 with four stereocenters has a left end different
from that of 3a−c. Even though we only made one of the eight
possible stereoisomers of 7, we can now combine the new data
obtained for 7 with the data for 3a to assemble predicted
spectra of the other seven isomers of 7 and its higher oligomers.
This ability to directly analyze complex, saturated oligoisopre-
noids is a powerful tool to clarify a heretofore cloudy situation
with respect to stereoisomer structure and purity of synthetic
and natural samples.
REFERENCES
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EXPERIMENTAL SECTION
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The synthesis of intermediates 3c and 6 followed published routes.
Experimental details and characterization data can be found in refs 4
and 11. Detail reaction conditions and yields are shown in the
Supporting Information, Schemes S1 and S2.
tert-Butyldiphenyl(((2S,6S,10S,14S)-2,6,10,14-tetramethyl-
henicosyl)oxy)silane (7). Dry 10 wt % Pt/C (0.003 g, 0.002 mmol)
was added to 6 (0.003 g, 0.005 mmol) in MeOH/CH2Cl2 (3:1, 1 mL).
The suspension was flushed three times with H2 (three vacuum/H2
cycles) and stirred under an atmosphere of H2 (1 atm, balloon) at rt
for 24 h. The reaction mixture was filtered through a silica gel plug and
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Smit, C.; ter Horst, B.; Hernandez-Olmos, V.; Feringa, B. L.;
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concentrated to yield the hydrogenation product 7 quantitatively. H
NMR (CDCl3, 700 MHz, ppm) δ 7.66 (d, J = 6.8 Hz, 4 H), 7.41 (t, J =
7.3 Hz, 2 H), 7.37 (t, J = 7.2 Hz, 4 H), 3.51 (dd, J = 5.6, 9.8 Hz, 1 H),
3.43 (dd, J = 6.4, 9.8 Hz, 1 H), 2.22 (t, J = 7.6 Hz, 1 H), 1.63 (m, 3 H),
1.13−1.42 (m, 30 H), 1.05 (s, 9 H), 0.92 (d, J = 6.7 Hz, 3 H), 0.88 (t, J
= 7.0 Hz, 3 H), 0.82−0.85 (m, 9 H); 13C NMR (CDCl3, 175 MHz,
ppm) δ 135.61, 134.13, 134.11, 129.43, 127.52, 68.88, 37.42, 37.40,
37.38, 37.34, 37.05, 35.71, 33.46, 32.80, 32.76, 32.75, 31.92, 29.99,
29.69, 29.66, 29.65, 29.64, 29.60, 29.40, 29.36, 27.08, 26.85, 24.47,
24.45, 24.38, 22.69, 19.79, 19.75, 19.74, 19.30, 16.97, 14.13.
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dx.doi.org/10.1021/jo4005298 | J. Org. Chem. 2013, 78, 4913−4918