Journal of Natural Products
Article
3,5-(Dibromo-4-methoxyphenyl)acetic Acid (2a). Compound 2a
was prepared in 21% yield according to the method described by
Weller et al.24 Spectral data matched those previously reported.
2-(3,5-Dibromo-4-methoxyphenyl)-N-(5-(dimethylamino)pentyl)-
acetamide (2b). A 0.25 mL amount of 5-(dimethylamino)amylamine
(1.61 mmol, 1.05 equiv) was added to a stirred solution of 2a (494.0
mg, 1.53 mmol) and HBTU (580 mg, 1.53 mmol, 1.0 equiv) in 5 mL
of DMF and 1.06 mL of DIPEA (6.12 mmol, 4 equiv). The reaction
mixture was stirred overnight at rt before being diluted with 20 mL of
EtOAc and washed with 2 × 25 mL of 10% citric acid, 25 mL of 10%
NaHCO3, and 25 mL of saturated brine. The EtOAc extract was dried
over Na2SO4, filtered, and concentrated in vacuo to yield a yellow oil
organism S. pulmonaria and the potential of the species for the
discovery of new structural motifs for further lead compound
development in a number of therapeutic areas.
EXPERIMENTAL SECTION
■
General Experimental Procedures. UV spectra were determined
on a Lambda 25 spectrometer from Perkin-Elmer Instruments.
Infrared spectra were recorded on an Avatar 320 FT-IR spectrometer
from Nicolet. 1D and 2D NMR spectra of natural products were
recorded on a Varian VNMRS 600 MHz spectrometer in DMSO-d6.
Carbon resonances were derived from gHSQC and gHMBC
experiments. NMR spectra of synthetic compounds were recorded
on a Varian 7000e 400 MHz spectrometer in DMSO-d6. Chemical
shifts were referenced to the residual solvent peaks, δH 2.50 and δC
39.5. Mass spectra were acquired on an LTQ Orbitrap XL Hybrid
Fourier Transform mass spectrometer from Thermo Scientific and the
Thermo Scientific Accela HPLC-LTQ Ion Trap-Orbitrap Discovery
system. HPLC of synthetic compounds was performed on a 1200
series instrument with a binary pump and a photodiode array detector
from Agilent Technologies. All starting materials were purchased from
Sigma-Aldrich apart from 5-(dimethylamino)amylamine, which was
provided by Matrix Scientific. Chemicals were used without further
purification except for methyl iodide, which was distilled and stored
over Cu(s) prior to use. Electric eel AChE (6.25 U/mL) was provided
by Sigma-Aldrich.
1
(57% yield). No further purification was performed. H NMR (400
MHz, CDCl3) δ 7.36 (s, 2H), 3.79 (s, 3H), 3.34 (s, 2H), 3.14 (q, J =
6.0 Hz, 2H), 2.28 (m, 2H), 2.24 (s, 6H), 1.47 (m, 2H), 1.40 (m, 2H),
1.24 (m, 2H) ppm; 13C NMR (100 MHz, CDCl3) δ 170.1 (C), 153.0
(C), 134.2 (C), 133.5 (CH), 118.2 (C), 60.7 (CH3), 59.1 (CH2), 45.1
(CH3), 41.8 (CH2), 39.7 (CH2), 29.1 (CH2), 26.8 (CH2), 24.3 (CH2)
ppm; HRESIMS m/z 435.0279 [M + H]+ (calcd for C16H2579Br2O2N2,
435.0283).
5-(2-(3,5-Dibromo-4-methoxyphenyl)acetamido)-N,N,N-trime-
thylpentan-1-aminium Iodide (2). A 380 mg amount of 2b (0.87
mmol) was dissolved in 5 mL of CH2Cl2, and 5 mL of a 1 M K2CO3
solution was added. The resulting mixture was stirred at room
temperature for 15 min before 0.41 mL of methyl iodide (8.70 mmol,
10 equiv) was added and the reaction was stirred overnight. The pH of
the reaction was adjusted to 7 with 2 M HCl. All volatiles were
evaporated, and the crude solid material (537 mg) was dissolved in
CH2Cl2. Silica was added, and the crude material was adsorbed onto
the silica under vacuum. Silica column purification was performed
using a mixture of HOAc/H2O/MeOH/EtOAc (3:2:3:3) and EtOAc
1:9 as eluent. A final purification of the isolated 237 mg of 2 with
semipreparative reversed-phase HPLC was necessary. The isolated 2
was dissolved in 5% CH3CN to a concentration of 25 mg/mL, and
HPLC purification was performed employing a Waters Sunfire Prep C-
18 column (10 μm, 90 Å, 10 × 250 mm) using a gradient of 16−40%
CH3CN in H2O over 40 min until 50 mg (13% yield) of 2 was
collected. IR νmax 3036, 1688, 1473, 1200, 1125 cm−1; UV (MeOH)
λmax 220 nm; 1H NMR and 13C NMR, see Table S3 in the Supporting
Information; HRESIMS m/z 449.0439 [M]+ (calcd for
C17H2779Br2O2N2, 449.0440).
Acetylcholinesterase Inhibition Assay. AChE activity was
measured by Ellman’s method29,30 using acetylthiocholine chloride
(0.25, 0.5, or 1 mM) as a substrate in 100 mM potassium phosphate
buffer pH 7.4 at 25 °C and electric eel AChE as a source of enzyme
(final concentration in the test 0.0075 U/mL). Hydrolysis of
acetylthiocholine chloride was followed on a kinetic microplate reader
(Dynex Technologies) at 405 nm. Stock solutions (2 mg/mL) of 1
and 2 were prepared in deionized H2O and DMSO, respectively.
AChE inhibition by 1 and 2, progressively diluted in H2O, was
monitored for 5 min. All readings were corrected for their appropriate
blanks, and a run with only acetylthiocholine chloride served as assay
positive control. In the case of 2, the blank reactions without the
inhibitor were run in the presence of the appropriate dilution of
DMSO. Every measurement was repeated at least three times.
Antibacterial Assay. Test strains used were Staphylococcus aureus
(ATTC 9144), Escherichia coli (ATCC 25922), Pseudomonas
aeruginosa (ATTC 27853), and Corynebacterium glutamicum (ATTC
13032). All isolates were grown at 37 °C in Mueller Hinton broth
(Difco Laboratories). Bacterial growth was continuously monitored
with an Envision plate reader (Perkin-Elmer). The test was performed
in 96-well Nunc microtiter plates, in which 50 μL of test fractions
dissolved in H2O was incubated with 50 μL of a suspension of an
actively growing (log phase) culture of bacteria diluted to a starting
concentration of approximately 5 × 105 cells per well. The
antimicrobial peptide cecropin B (25 μM) was used as a positive
control. The minimum inhibitory concentration was defined as the
minimum concentration resulting in no change in optical density after
incubation for 24 h at 37 °C. Compounds were tested at
concentrations ranging from 8 to 500 μg/mL.
Extraction and Purification of Pulmonarins A and B.
Specimens of Synoicum pulmonaria (Ellis and Solander, 1786) were
collected off the coast of Tromsø in northern Norway and identified
by Professor Bjørn Gulliksen (Department of Arctic and Marine
Biology, University of Tromsø, Tromsø, Norway). The organisms are
stored at the Norwegian College of Fishery Science, University of
Tromsø, Norway. Specimens (80 g, wet weight) of the organism were
pooled, lyophilized, and extracted with 10 volumes (v/w) of 60/40
CH3CN/H2O containing 0.1% TFA, at 4 °C. The supernatant was
removed after 24 h, and the extraction procedure was repeated. The
combined supernatants were then placed in a −20 °C freezer for 2 h,
resulting in phase separation between a CH3CN-rich organic phase
and an aqueous phase. The aqueous phase was loaded on a C18 solid
phase extraction cartridge and eluted with 10%, 40%, and 80%
CH3CN. The 40% CH3CN SPE eluate was subsequently loaded on a
semipreparative HPLC (column; Waters, Sunfire C18, 250 × 10 mm)
with photodiode array (PDA) detection. Compounds 1 (3.0 mg) and
2 (3.9 mg) were eluted after 41.9 and 38.4, min respectively, using a
gradient of 0% to 40% CH3CN/0.05% TFA in H2O.
Pulmonarin A (1): yellow gel; UV (MeOH) λma1x (log ε) 221 nm
(4.4); IR νmax 3036, 1684, 1474, 1275, 1123 cm−1; H and 13C NMR
data, see Table 1; HRESIMS m/z 393.9650 [M]+ (calcd for
C13H1879Br2O3N, 393.9654).
Pulmonarin B (2): yellow gel; UV (MeOH) λma1x (log ε) 220 nm
(4.5); IR νmax 3036, 1688, 1473, 1200, 1125 cm−1; H and 13C NMR
data, see Table 1; HREIMS m/z 449.0439 for [M]+ (calcd for
C17H27O2N2Br2, 449.0440).
Syntheses. 2-((3,5-Dibromo-4-methoxybenzoyl)oxy)-N,N,N-tri-
methylethanaminium Chloride (1). DCC (1.12 g, 3 equiv, 5.40
mmol), 1.68 g of 3,5-dibromo-4-methoxybenzoic acid (1.5 equiv, 5.40
mmol), and 0.16 g of DMAP (0.2 equiv, 1.28 mmol) were added to 2-
hydroxy-N,N,N-trimethylethanaminium chloride (0.67 g, 4.80 mmol)
in 10 mL of CH2Cl2. The mixture was stirred at room temperature (rt)
for 6 days. A white solid was obtained, which was extracted with H2O
(3 × 20 mL), filtered, and dried. An aliquot of the dried filtrate (713
mg) was dissolved in 5% CH3CN to a concentration of 25 mg/mL and
purified by HPLC using a gradient of 5−100% CH3CN over 45 min,
employing a Waters Sunfire Prep C-18 column (10 μm, 90 Å, 10 ×
250 mm) until 70 mg of the sample was collected for biological activity
screening. The isolated compound (4% yield) was a yellow, viscous
1
gel. IR νmax 3036, 1684, 1474, 1275, 1123 cm−1; H NMR and 13C
NMR, see Table S3 in the Supporting Information; HRESIMS m/z
393.9650 [M]+ (calcd for C13H1879Br2O3N, 393.9654).
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dx.doi.org/10.1021/np401002s | J. Nat. Prod. 2014, 77, 364−369