Fused glycoluril-tetrathiafulvalene molecular clips as receptors for neutral electron acceptor guests

Article abstract of DOI:10.1021/ol500458e

Glycoluril-based molecular clips incorporating tetrathiafulvalene (TTF) sidewalls have been synthesized, and the efficient binding ability in solution of this host architecture toward m-dinitrobenzene through donor-acceptor interaction has been demonstrat

Full text of DOI:10.1021/ol500458e

Letter
pubs.acs.org/OrgLett
Fused Glycoluril-Tetrathiafulvalene Molecular Clips as Receptors for
Neutral Electron Acceptor Guests
Yoann Cotelle, Magali Allain, Stephanie Legoupy, and Pietrick Hudhomme*
́
́
́
Universite d’Angers, Laboratoire MOLTECH-Anjou, CNRS UMR 6200, 2 Boulevard Lavoisier, F-49045 Angers, France
S
* Supporting Information
ABSTRACT: Glycoluril-based molecular clips incorporating tetrathiafulvalene (TTF) sidewalls have been synthesized, and the
efficient binding ability in solution of this host architecture toward m-dinitrobenzene through donor−acceptor interaction has
been demonstrated.
flexible benzo[1,2-f:4,5-f′]bis[1,4]dithiocine spacer9 have been
he recognition of neutral guests still remains one of the
Tmain challenges in the field of supramolecular chemistry, reported so far in studying the host−guest binding of electron-
deficient guests. Using the glycoluril scaffold, hydroquinone
derivative10 or naphthoquinone11 spacers were introduced to
position both TTF units at the suitable interplanar distance for
complexation of the paraquat or F4-TCNQ guest molecule
inside the cavity, respectively. These corresponding molecular
clips 4 and 5 were synthesized through a five- and four-step
synthetic strategy, respectively, starting from diphenylglycoluril
6.
and molecular clips have been recently investigated to address
this particular issue.1 These molecular receptors are constituted
by an open cavity defined by a central platform connected to
two arms chosen for their capability to sandwich molecular
guests through weak interactions. The glycoluril scaffold2 has
become a highly efficient preorganized and rigid spacer which
has been largely used in the preparation of host molecular
systems such as molecular clips,3 but also capsules4 and
cucurbit[n]uril macrocycles.5 Nevertheless, glycoluril-based
molecular clips bearing electroactive sidewalls and capable of
binding guests through donor−acceptor interactions have been
poorly investigated. We describe here the synthesis, X-ray
crystal structures, and binding properties of glycoluril-derived
molecular clips 1−3 incorporating electron-rich tetrathiafulva-
lene (TTF) sidewalls (Figure 1). Only a few TTF-containing
molecular clips based on a rigidified calix-[4]pyrrole,6 calix-
[2]pyrrole[2]thiophene,7 calix-[4]arene8 platform or a more
Here we design a new type of electron-rich clip-shape host
molecules based on the glycoluril platform on which TTF arms
are directly connected without any spacer. The synthetic
strategy of these molecular clips 1−3 is based on a
straightforward nucleophilic substitution from diphenylglyco-
luril 6 leading to a seven-membered ring (Scheme 1). Starting
material 6 was prepared in 80% yield according to literature
using commercial and cheap benzyl and urea materials.12
Considering that urea N-alkylation of compound 6 has been
successfully developed with the 2,3-bis(bromomethyl)benzene
derivative in a basic medium in DMSO,13 we first applied this
methodology using 4,5-bis(bromomethyl)-2-thioxo-1,3-dithiole
7.14 The reaction carried out in the presence of tBuOK in
DMSO by controlling the temperature at 20 °C afforded
compound 8 in 36% yield. Trimethylphosphite mediated cross-
coupling using 2-oxo-1,3-dithiole moiety 9a15 or 9b16 gave
corresponding molecular clip 1 or 2, respectively, in 15% yield.
For compound 2, we could explain this low yield by the
presence of byproducts, such as phosphonate derivatives 10 and
11 which were characterized in the crude reaction mixture by
1H NMR, thanks to the coupling constants (2JH−P = 5.6 Hz and
Received: February 12, 2014
Figure 1. Formula of glycoluril-TTF molecular clips.
© XXXX American Chemical Society
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Letter
Scheme 1. Synthesis of Glycoluril and TTF-Based Molecular Clips
3JH−P = 10.7 Hz) and MALDI-TOF mass spectrometry. The
formation of these structures is consistent with the reaction of
the thione functionality using trialkylphosphite in diluted
conditions.15 The formation of compound 12 was also
evidenced by MALDI-TOF mass spectrometry (M+• = 1636),
but this original bis-molecular clip has not been yet isolated.
Deprotection of 2-cyanoethylsulfanyl protective groups was
achieved using CsOH·H2O in a DMF/MeOH mixture.17
Subsequent tetraalkylation of the tetrathiolate intermediate
was carried out by addition of iodomethane affording molecular
clip 3 in 72% yield. Considering that this three-step synthesis
could afford target 3 in an overall low yield, we turned our
attention to a straightforward strategy using the one-step
reaction between diphenylglycoluril 6 and 2,3-bis(bromo-
methyl)TTF 13. Such a TTF derivative, developed in our
group,18 has been successfully used as an efficient building
block19 to generate the corresponding diene through reductive
elimination allowing Diels−Alder cycloaddition,20 or to access
phosphonate for Horner−Wadsworth−Emmons olefination.21
To our knowledge, it has been involved as an electrophilic
substrate in only two other examples using either potassium
thiocyanate22 or 4-aminoTEMPO23 as the nucleophile. Here
this methodology proved to be particularly efficient and the
reaction between compounds 6 and 13 in the presence of
tBuOK in DMSO at 20 °C gave molecular clip 3 in 48% yield.
Single crystals of clips 2 and 3 were obtained by slow
evaporation from CH2Cl2/hexane solutions. These molecular
Figure 2. X-ray crystallographic structures of molecular clips 2 (left)
and 3 (right).
The resulting tapering cavity could be characterized by the
angle α taking into account both TTF moieties to define the
two mean planes (Figure 2). Corresponding angles close to 43°
and 30° for clips 2 and 3, respectively, were determined. Due to
the presence of bulky terminal 2-cyanoethylsulfanyl groups, the
cavity appears significantly larger in clip 2. The distance (d)
between both TTF central double bonds was estimated to be
equal to 8.25 Å for clip 2 and must be compared with that of
7.41 Å for clip 3. The three-dimensional packing in the crystal
of molecular clips 2 and 3 reveals a head-to-tail arrangement
between two neighboring clip molecules. It should be noted
that no dimeric packing motif resulting from self-association of
molecular clips with the reciprocal insertion of the TTF
sidewall of one clip into the cleft of the opposing clip was
observed.13d,24 Concerning the crystallographic packing, short
interplanar distances (3.51 Å) were determined between two
independent TTF molecules of clip 2 with clear evidence of
clips crystallize in the P1 triclinic group with one CH Cl
̅
2
2
molecule included inside the cavity (Figure 2). The U-shaped
conformation of these molecular clips is confirmed by the angle
θ around 113° defined with three N−C−C consecutive atoms
of the seven-membered ring.
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Letter
intermolecular interactions. On the contrary, two neighboring
molecules of clip 3 appeared to be significantly shifted one to
each other (Supporting Information).
The cyclic voltammogram (CV) of clips 1−3 showed
reversible oxidation processes corresponding to the successive
generation of the cation radical and dication of the TTF moiety
(Figure 3). As expected, the variation of oxidation potential
Figure 4. Plots of absorbance at 800 nm for molecular clip 3 (10−3
in o-C6H4Cl2) upon addition of m-DNB (10−1 M in o-C6H4Cl2). Inset:
Job’s plot analyses at 800 nm confirming the 1:1 stoichiometry.
M
complex m-DNB@clip 3. From these results, the association
constant was determined to be Ka = 3630 ( 540) M−1. This
binding value confirms that molecular clip 3 is an efficient
receptor for neutral molecules, even for a weak acceptor such as
m-DNB. This value has to be compared with the association
constant Ka = 115 ( 10) M−1 determined using UV titration by
Nolte et al. for the interaction between m-DNB and a glycoluril
based receptor incorporating 2,7-dimethoxynaphthalene side-
walls.3a,c
In conclusion, we have presented a straightforward synthesis
of molecular clips built around the preorganized glycoluril
scaffold which connects electroactive TTF sidewalls. In
particular, the preparation of molecular clip 3 constitutes the
first example of a one-step synthesis of a glycoluril and TTF-
based host−guest architecture. The good binding ability of this
system for m-DNB in solution is demonstrated by UV−visible
spectroscopy. Moreover, the suitable interplanar distance of
around 7−8 Å between TTF arms offers a great opportunity for
studying the supramolecular recognition and binding associa-
tion of a wide variety of neutral electron-deficient molecules
involving donor−acceptor interaction.
Figure 3. Cyclic voltammograms of molecular clips 1 (dark), 2 (red),
and 3 (blue) in CH2Cl2/CH3CN 3:1 recorded in n-Bu4NPF6 0.1 M
solution as the supporting electrolyte, with platinum wires as counter
and working electrodes.
values is in agreement with the presence of either electron-
donating (SMe) or -withdrawing groups (CO2Me) (Table 1).
Table 1. Oxidation Potentials from Cyclic Voltammograms
of Molecular Clips 1, 2, and 3 (Scan Rate: 100 mV/s; V vs
SCE)
compd
E°ox1
E°ox1′
E°ox2
a
a
b
1
2
3
+0.50
+0.44
+0.36
+0.65
+0.55
+0.48
+0.96
+0.85
+0.77
a
a
a
a
b
b
a
b
One-electron oxidation process. Two-electrons oxidation process.
Noticeably, the first oxidation step was split for all clips 1−3
(E°ox1 and E°ox1′). This phenomenon is characteristic of a
molecular system in which two inter-TTF units interact here
through space at the oxidized TTF+• state, with the Coulombic
repulsion between positively charged species leading to a
separation of the oxidation potentials of neutral and oxidized
species. The reversible two-electrons process for the second
oxidation wave (E°ox2) is in accordance with independent
TTF2+ units subject to repulsive electrostatic interactions.
Considering that molecular clip 3 presents the most efficient
π-donating properties according to CV analysis and an
interesting 7.41 Å interplanar TTF distance, its binding ability
was evaluated toward 1,3-dinitrobenzene (m-DNB) which was
used as a neutral electron acceptor. Whereas no modification of
ASSOCIATED CONTENT
* Supporting Information
Experimental details, characterization data for new compounds.
This material is available free of charge via the Internet at
http://pubs.acs.org.
■
S
AUTHOR INFORMATION
Corresponding Author
■
*E-mail: pietrick.hudhomme@univ-angers.fr.
Notes
The authors declare no competing financial interest.
1
ACKNOWLEDGMENTS
the H NMR spectrum was noted upon addition of m-DNB
■
into a solution of molecular clip 3 in CDCl3, the host−guest
affinity was detected by UV−vis spectroscopy by monitoring
the changes at 800 nm upon titration of clip 3 with the addition
of m-DNB aliquots (Figure 4). A saturation was observed after
the addition of approximatively 1 equiv of m-DNB which fits
well to a 1:1 binding isotherm. A Job plot carried out in o-
C6H4Cl2 between clip 3 and m-DNB exhibited a maximum at
0.5, a finding that is consistent with the formation of the
This work was supported by a grant from the MENRT for Y.C.
We gratefully acknowledge Dr. Ingrid Freuze (platform PIAM,
University of Angers) for her assistance in mass spectrometry
experiments.
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