D. Kand et al. / Dyes and Pigments 106 (2014) 25e31
27
ꢀ
chromatography over silica gel (Eluent: 45% EtOAc in petroleum
ether) to furnish the pure compound 7 (169 mg, 35%) as yellow
solid. M.p.: 242e243 ꢂC; IR (KBr): nmax/cmꢁ1 3367, 1624, 1607, 1557,
1535, 1481, 1446, 1384, 1366, 1333, 1313, 1159, 1105; 1H NMR
Z ¼ 2; rcalc ¼ 1.308 g cmꢁ3; 2qmax ¼ 56.48; MoKal ¼ 0.71073 A. Fine-
focus sealed tube source with graphite monochromator. R ¼ 0.0408
(for 1746 reflection I > 2
s
(I)), wR ¼ 0.1040 which was refined ÐF2Ð
and S ¼ 1.056 for 158 parameters and 2212 unique reflections. The
structure was obtained by direct methods using SHELXS-97 [20,21].
All non-hydrogen atoms were refined anisotropically. The
hydrogen atoms were fixed geometrically in the idealized position
and refined in the final cycle of refinement as riding over the atoms
(400 MHz, DMSO-d6):
8.36 (s, 1H), 7.97e7.76 (m, 1H), 7.68 (dd, J ¼ 7.9, 1.5 Hz, 3H), 7.56e
7.19 (m, 5H); 13C NMR (100 MHz, DMSO-d6):
159.0, 152.0, 150.6,
d
8.95e8.75 (m, 1H), 8.67 (d, J ¼ 1.6 Hz, 2H),
d
148.4, 143.8, 139.0, 134.5, 133.6, 133.2, 129.9, 129.7 (2C), 129.5, 128.8
(2C), 128.5, 127.7, 127.1, 120.7, 120.4, 116.2; HRMS (ESI): Calc. for
to which they are bonded
2.6. Preparation of samples
2.6.1. Preparation of the medium
m
¼ 0.082 mmꢁ1
.
C
21H14N3O7S [M þ H]þ: 452.0553; Found: 452.0554.
2.4.2. (Z)-N-(3-(benzo[d]thiazol-2-yl)-7-(diethylamino)-2H-
chromen-2-ylidene)-2,4-dinitrobenzenesulfonamide
(C26H21N5O7S2) 8
HEPES buffer (0.01 M, pH 7.4) was prepared by dissolving HEPES
(free acid) in deionized water and then pH was adjusted to the
desired value with 0.1 N NaOH.
To a solution of 3-(benzo[d]thiazol-2-yl)-N,N-diethyl-2-imino-
2H-chromen-7-amine 8a (125 mg, 0.357 mmol) in pyridine (10 mL)
placed in a 100 mL two-neck round bottomed flask were added 2,4-
dinitrobenzene-1-sulfonyl chloride (362 mg, 1.35 mmol) at 0 ꢂC
slowly with stirring. The reaction mixture was placed under ni-
trogen atmosphere and stirred at room temperature for 1 h. After
completion of the reaction, the solvent was removed under reduced
pressure. The residue was poured into H2O (10 mL) and extracted
with CH2Cl2 (15 mL ꢀ 3). The combined organic layer was washed
with water (10 mL ꢀ 3), brine (10 mL) and dried over Na2SO4. The
solvent was removed under reduced pressure to obtain a yellow
residue which was purified by column chromatography over silica
gel (Eluent: 2% MeOH in Chloroform) to furnish the pure compound
8 (232 mg, 72%) as red solid. M.p.: 261e262 ꢂC; IR (KBr): nmax/cmꢁ1
3565, 1643, 1532, 1484, 1466, 1366, 1346, 1315, 1128, 1082; 1H NMR
2.6.2. Preparation of the solutions of 7 and 8
A stock solutions of 7 (2437
in DMSO. Final concentration of each of 7 and 8 during each assay
was 10 M.
mM) and 8 (1138 mM) were prepared
m
2.6.3. Preparation of solutions of analytes
Stock solutions of aniline, phenol, thioacetic acid, 4-
Chlorothiophenol, 4-Methylthiophenol, 2-Naphthalenethiol and
thiophenol were prepared in DMSO (concentrations ranging from
9076
amino acids were prepared in deionized H2O with varied concen-
trations ranging from 2391 M to 13,076 M. Calculated volumes of
analytes were added from respective stock solutions to fluores-
cence each cuvette to provide 100 M.
mM to 21,475 mM). Stock solutions of other analytes including
m
m
(400 MHz, DMSO-d6)
d 9.20 (s, 1H), 8.92e8.76 (m, 2H), 8.60 (dd,
J ¼ 8.7, 2.3 Hz, 1H), 8.13 (d, J ¼ 7.9 Hz, 1H), 7.96 (d, J ¼ 8.1 Hz, 1H),
7.85 (d, J ¼ 9.1 Hz, 1H), 7.50 (t, J ¼ 8.2 Hz, 1H), 7.39 (t, J ¼ 7.5 Hz, 1H),
6.96 (dd, J ¼ 9.1, 2.2 Hz, 1H), 6.45 (d, J ¼ 1.7 Hz, 1H), 3.52 (d,
J ¼ 7.1 Hz, 4H), 1.11 (t, J ¼ 7.0 Hz, 6H); 13C NMR (100 MHz, DMSO-
m
2.7. UVevisible and fluorescence spectra of 7, 7a, 8 and 8a
UV-visible and fluorescence spectra (Fig. S4) of probes 7
d6):
d 159.3 (2C), 156.1, 155.1, 152.6, 151.2, 149.4, 147.4, 143.7, 143.7,
138.2,135.5,132.5,132.0,126.1,125.9,124.3,121.5,121.4,119.4,112.3,
109.9, 108.8, 94.4, 44.3 (2C), 11.7 (2C); HRMS (ESI): Calc. for
(10 mM), 7a (10 mM), 8 (10 mM) and 8a (10 mM) were recorded in
C
26H21N5O7S2 [M þ H]þ: 580.0961; Found: 580.0952.
HEPES buffer (10 mM, pH 7.4). From absorption spectra molar
extinction coefficient, ε of species 7, 7a, 8 and 8a were determined
using BeereLambert law (Eq. (1)):
2.5. Crystal structure parameters of 7 and 7a
A
c ꢀ l
2.5.1. 2,4-Dinitro-N-(3-phenyl-2H-chromen-2-ylidene) benzene
sulfonamide 7 (CCDC 940800)
ε ¼
(1)
C
21H13N3O7S; Compound 7 was crystallized from dimethyl
where,
A
¼
absorbance,
ε
¼
molar extinction coefficient,
sulfoxide at room temperature. An yellow needle shaped crystal
with approximate dimensions 0.286 ꢀ 0.090 ꢀ 0.037 mm gave an
c ¼ concentration of the solution and l ¼ path length of UV cuvette
(l ¼ 1 cm).
Orthorhombic with space group P212121;
a
b
¼
7.2532 (7)
g
Fluorescence spectra of 7, 7a, 8 and 8a were recorded by exciting
at respective lmax values (333 nm for 7 and 7a, 487 nm for 8 and 8a).
The excitation and emission slit width were 5 nm/5 nm for 7 and
2 nm/5 nm for 8.
ꢀ
b ¼ 14.6345 (14) c ¼ 18.2027 (18) A,
a
¼ 90ꢂ
¼ 90ꢂ
¼ 90ꢂ;
3
V ¼ 1932.2 (3) A ; T ¼ 296 (2) K; Z ¼ 4; rcalc ¼ 1.504 g cmꢁ3
;
ꢀ
ꢀ
2
qmax ¼ 48.24; MoKal ¼ 0.71073 A. Fine-focus sealed tube source
with graphite monochromator. R ¼ 0.0300 (for 2826 reflection
I > 2
s
(I)), wR ¼ 0.0749 which was refined ÐF2Ð and S ¼ 1.027 for
289 parameters and 3071 unique reflections. The structure was
obtained by direct methods using SHELXS-97 [20,21]. All non-
hydrogen atoms were refined anisotropically. The hydrogen
atoms were fixed geometrically in the idealized position and
refined in the final cycle of refinement as riding over the atoms to
2.8. Thiol sensing
2.8.1. Determination of reaction rate (k), half-life (t1/2) and response
time (tR) for probes 7 and 8
Reaction rate (k), half-life (t1/2) and response time (tR) for probes
7 and 8 were determined by fluorescence kinetics experiments. In
which they are bonded
m
¼ 0.215 mmꢁ1
.
fluorescence kinetics experiment, a solution of either 7 (10
(10
M) in HEPES buffer (10 mM, pH ¼ 7.4) was placed in a fluo-
rescence cuvette (under stirring conditions) and fluorescence
intensity (at
¼ 435 nm for 7 upon lex ¼ 333 nm and at 524 nm for
mM) or 8
2.5.2. 3-phenyl-2H-chromen-2-imine 7a (CCDC 940801)
m
C15H11NO; Compound 7a was crystallized from toluene at room
temperature. A colorless cube shaped crystal with approximate
dimensions 0.210 ꢀ 0.117 ꢀ 0.065 mm gave an Monoclinic with
l
8 upon lex ¼ 487 nm) was monitored. At t ¼ 30 s an analyte (100
mM
ꢀ
space group P21; a ¼ 6.247 (5ꢂ) b ¼ 7.475 (7) c ¼ 12.177 (10) A,
of either of PhSH, Cys and Cys) was added. Subsequently, the time
3
ꢀ
a
¼ 90ꢂ
b
¼ 98.78 (2)o
g
¼ 90 ; V ¼ 561.9 (9) A ; T ¼ 296 (2) K;
was normalized with t ¼ tꢁ30 s and then converted to minute