Journal of Medicinal Chemistry
Article
(CDCl3. 400 MHz): δ 8.35 (s, 1H, H-6), 8.31(s, 1H, H-6′), 7.72, s,
1H, H-4), 7.23, (s, 1H, H-4′), 5.55 (d, 1H, HA-BnCH2), 5.54 (d, 1H,
HB-BnCH2), 5.47 (d, 1H, HA-Bn′CH2), 5.40 (d, 1H, HB-Bn′CH2), 4.17
(s, 1H, H-9), 4.32 (s, 1H, H-9′), 3.78 (m, 1H, HA-7), 3.54 (m, 1H, HB-
7), 3.67 (m, 1H, HA-7′), 3.49 (m, 1H, HB-7′), 3.05, (m, 1H, HA-8),
2.51 (m, 1H, HB-8), 3.01 (m, 1H, HA-8′), 2.57 (m, 1H, HB-8′), 3.22(m,
1H, HA-10), 3.17 (m, 1H, HB-10), 3.18, (m, 1H, HA-10′), 3.12 (m, 1H,
HB-10′), 3.47 (m, 1H, HA-11), 2.34 (m, 1H, HB-11), 3.33 (m, 1H, HA-
11′), 2.37 (m, 1H, HB-11′) ppm. 13C NMR (CDCl3, 100 MHz): δ
150.18, 149.99 (C-3, C-3′), 144,70, 145.76 (C-5, C-5′), 105.66, 105.22
(C-4, C-4′), 155.62, 155.37 (C-6, C-6′), 74.78, 74.69 (C-9, C-9′),
59.24, 59.52 (C-7, C-7′), 54.04, 54.34 (C-8, C-8′), 45.18, 45.62 (C-10,
C-10′), 52.35, 52.80 (C-11, C-11′), 53.44, 53.42 (C-BnCH2, C-
Bn′CH2), 137.10, 137.94 (C-Bn ipso, C-Bn′ ipso), 126.73, 126.61 (C-
Bn m-, C-Bn′ m-),128.68, 128.60 (C-Bn o-, C-Bn′ o-), 127.61, 127.49
(C-Bn p-, C-Bn′ p-) ppm. MS (FAB) m/z (%): 563 (MH+, 54). Anal.
(C32H38N10) C, H, N.
13,26-Dibenzyl-3,6,9,12,13,16,19,22,25,26-decaazatricyclo-
[22.2.1.111,14]octacosa-1(27),11,14(28),24-tetraene (3). To a stirred
suspension of Schiff base 8 (450 mg, 0.8 mmol) in 20 mL of EtOH
was added solid NaBH4 (302 mg, 8.0 mmol) portionwise. The
reduction was carried out at room temperature for 2 h. The solvent
was then evaporated, and after addition of 20 mL of H2O, the pH was
adjusted to 9 by addition of 5% aqueous HCl. The solution was
extracted with CHCl3, and the organic layer was dried (Na2SO4) and
evaporated to yield a white solid, which was crystallized from toluene
(378 mg, 83%). Mp: 137−138 °C (lit. mp: 136−138 °C21). 1H NMR
(D2O, pH = 12, 400 MHz): δ 7.15 (m, 6H, H-Bn m-, p-), 6.97 (m, 4H,
H-Bn o-), 6.17 (s, 2H, H4), 5.17 (s, 4H, H-BnCH2), 3.57 (s, 8H, H-6,
H-6′, 2.41 (s, 8H, H-7, H-7′), 2.32 (t, 4H, H-8), 2.23 (t, 4H, H-8′)
ppm. 13C NMR (D2O, pH 12, 75 MHz): δ 150.75 (C-3), 143.70 (C-
5), 138.03 (C-Bn ipso), 130.02 (C-Bn o-), 127.64 (C-Bn m-), 129.05
(C-Bn p-), 106.34 (C-4), 53.20 (C-BnCH2), 47.14 (C-7, C-7′), 48.15
(C-8), 46.73 (C-8′), 45.90 (C-6), 43.42 (C-6′) ppm. MS (FAB) m/z
(%): 571 (MH+, 69). Anal. (C32H46N10) C, H, N.
[3]·6HCl. A mixture of 3 (285 mg, 0.5 mmol) and 1 M aqueous
hydrochloric acid (4 mL) was stirred for 12 h. After the addition of
ethanol (50 mL), a white solid was formed, filtered off, and dried over
phosphorus pentoxide at 60 °C for 48 h. Yield: 350 mg (85%). Mp:
247−249 °C. 1H NMR (D2O, 400 MHz): δ 7.28 (m, 6H, H-Bn m-, H-
Bn p-), 7.01 (m, 4H, H-Bn o-) 6.78 (s, 2H, H-4), 5.40 (s, 4H, H-
BnCH2) 4.35 (s, 4H, H-6′), 4.26 (s, 4H, H-6), 3.35−3.40 (m, 8H, H-
7′, H-8′) 3.30−3.35 (m, 8H, H-7, H-8) ppm. 13C NMR (CDCl3, 75
MHz): δ 143.22 (C-3), 136.21, 136.82 (C-5, C-Bn ipso: interchange-
able signals), 130.44 (C-Bn m-), 129.70 (C-Bn p-), 128.10 (C-Bn o-),
111.23 (C-4), 54.58 (C-BnCH2), 45.30 (C-6), 45.20 (C-8′), 45.14 (C-
7′) 43.75, 43.19 (C-7, C-8: interchangeable signals), 42.56 (C-6′) ppm.
MS (ESI+, H2O/HCOOH) m/z positive mode (%): 571.5 (MH −
6HCl)+. Anal. (C32H46N10·6HCl·2H2O) C, H, N, Cl.
6,19-Dioctyl-3,6,9,12,13,16,19,22,25,26-decaazatricyclo-
[22.2.1.111,14]octacosa-1(27),11,14(28),24-tetraene (4). 3,5-Pyrazole-
dicarbaldehyde (372 mg, 3 mmol) was dissolved in hot methanol (180
mL). This solution was then cooled to room temperature and added
dropwise under argon to a stirred solution of 1,5-diamine-3-octyl-3-
azapentane22 (646 mg, 3 mmol) in methanol (300 mL). The reaction
was monitored by TLC (Cl3CH/MeOH 10:1), and when it was
complete (ca. 12 h), NaBH4 (681 mg, 18 mmol) was added
portionwise. After 2 h of reaction, the solvent was evaporated to
dryness under reduced pressure. The residual syrup was purified by
flash column chromatography on silica gel (MeOH/30% aqueous NH3
48:2). The free macrocycle was obtained as a colorless syrup. TLC: Rf
= 0.54, MeOH/30% aqueous NH4OH 10:1. Yield: 517 mg (53%). 1H
NMR (CDCl3, 400 MHz): δ 6.11(s, 2H, H-4), 3.81 (s, 8H, H-6), 2.84
(m, 8H, H-7), 2.65 (m, 8H, H-8), 2.48 (m, 4H, H-1 octyl), 1.41 (m,
4H, H-2 octyl), 1.21 (m, 20H, H-3 octyl, H-4 octyl, H-5 octyl, H-6
octyl, H-7 octyl), 0.83 (t, 6H, H-8 octyl) ppm. 13C NMR (CDCl3, 100
MHz): δ 145.67 (C-3, C-5), 102.47 (C-4). 54.18 (C-1 octyl), 51.29
(C-8), 46.98 (C-7), 45.30 (C-6), 31.79 (C-6 octyl), 29.49, 29.25,
27.51, 25.88 (C-2 octyl, C-3 octyl, C-4 octyl, C-5 octyl), 22.6 (C-7
octyl), 14.1 (C-8 octyl) ppm. MS (ESI+, MeOH) m/z (%): 616
(MH+). Anal. (C34H66N10·2H2O) C, H, N.
[4]·6HCl. A mixture of compound 4 (326 mg, 0.5 mmol) and 1 M
aqueous HCl (3 mL) was stirred for 12 h. After addition of EtOH (50
mL), the solvent was evaporated to dryness. Next, 30 mL of EtOH was
added, and the resulting solution was stirred for 1 h. A white solid was
formed, filtered off, and dried over phosphorus pentoxide at 60 °C for
48 h. Yield: 337 mg (81%). Mp: 230−231 °C (lit. mp:22 228−231
°C). 1H NMR (D2O, 400 MHz): δ 6.57 (s, 2H, H-4), 4.22 (s, 8H, H-
6), 3.36 (m, 8H, H-8), 3.30 (m, 8H, H-7), 3.04 (t, 4H, H-1 octyl), 3.22
(m, 4H, H-2 octyl), 1.06 (m, 10H, H-3 octyl, H-4 octyl, H-5 octyl, H-6
octyl, H-7 octyl), 0.61 (t, 6H H-8 octyl) ppm. 13C NMR (D2O, 100
MHz): δ 139.68 (C-3, C-5), 110.18 (C-4), 55.52 (C-1 octyl), 49.87
(C-8), 43.89 (C-6), 41.81 (C-7), 32.11 (C-6 octyl), 29.33 (C-4 octyl,
C-5 octyl), 26.73 (C-3 octyl), 23.97 (C-2 octyl), 23.13 (C-7 octyl),
14.55 (C-8 octyl) ppm. MS (ESI+, H2O): m/z 616 ([MH − 6HCl]+).
Anal. (C34H66N10·6HCl) C, H, N.
Parasite Strain, Culture. T. cruzi SN3 strain of IRHOD/CO/
2008/SN3 was isolated from domestic R. prolixus, the biological origin
of which is Guajira, Colombia.39 Epimastigote forms were grown in
axenic Grace’s insect medium (Gibco) supplemented with 10%
inactivated fetal bovine serum (FBS) at 28 °C in tissue-culture flasks.
In order to obtain the parasite suspension for the trypanocidal assay,
the epimastigote culture (in the exponential growth phase) was
concentrated by centrifugation at 400g for 10 min and the number of
flagellates was counted in a hemocytometric chamber.
Transformation of Epimastigotes to the Metacyclic Form.
Metacyclogenesis was induced by culturing the parasites at 28 °C in
modified Grace’s medium (Gibco) for 12 days, as described
previously.40 Twelve days after cultivation at 28 °C, metacyclic
forms were counted in a Neubauer hemocytometric chamber. The
proportion of metacyclic forms was around 40% at this stage.
Cell Culture and Cytotoxicity Tests. Vero cells (Flow) were
grown in RPMI (Gibco), supplemented with 10% inactivated fetal
bovine serum, in a humidified 95% air, 5% CO2 atmosphere at 37 °C
for 2 days. For the cytotoxicity testing, cells were placed in 25 mL
Colie-based bottles (Sterling) and centrifuged at 100g for 5 min. The
culture medium was removed, and fresh medium was added to a final
concentration of 1 × 105 cells/mL. This cell suspension was
distributed in a culture tray (with 24 wells) at a rate of 100 μL/well
and incubated for 2 days at 37 °C in a humidified atmosphere enriched
with 5% CO2. The medium was removed, and fresh medium was
added together with each test compound (at concentrations of 100,
50, 25, 10, and 1 μM). After 72 h of treatment, cell viability was
determined by flow cytometry according to a methodology described
by us.41
In Vitro Activity Assays: Extracellular Forms. Epimastigote
Assay. Epimastigotes were collected in the exponential growth
phase and distributed in culture trays (with 24 wells) at a final
concentration of 5 × 104 parasites/well. The compounds to be
tested and benznidazole were dissolved in medium trypano-
somes liquid (MTL) and were tested at 100, 50, 25, 10, and 1
μM. The effects of the different concentrations of each
compound against the epimastigotes were tested for 72 h
using a Neubauer hemocytometric chamber. The trypanocidal
effect is expressed as IC50 values, i.e., the concentration required
to result in 50% inhibition, as calculated by linear-regression
analysis from the Kc values of the concentrations used.
in Vitro Activity Assays: Intracellular Forms. Axenic
Amastigotes Assay. Axenic amastigotes of T. cruzi, were cultured
following the methodology described previously by Moreno et
al.42 Thus, the epimastigote transformation to amastigotes was
achieved after 3 days of culture in M199 medium (Invitrogen,
Leiden, The Netherlands) supplemented with 10% heat-
inactivated FCS, 1 g/L β-alanine, 100 mg/L L- asparagine,
200 mg/L saccharose, 50 mg/L sodium pyruvate, 320 mg/L
malic acid, 40 mg/L fumaric acid, 70 mg/L succinic acid, 200
mg/L α-ketoglutaric acid, 300 mg/L citric acid, 1.1 g/L sodium
bicarbonate, 5 g/L MES, 0.4 mg/L hemin, and 10 mg/L
gentamicine, pH 5.4 at 37 °C. The effect of each compound
4240
dx.doi.org/10.1021/jm2017144 | J. Med. Chem. 2012, 55, 4231−4243