A R T I C L E S
Jones et al.
This system has been characterized using a variety of methods
including electron paramagnetic resonance (EPR),10 circular
dichroism (CD),11 and fluorescence.12a,b Despite these extensive
investigations, 2D solution NMR characterization of folded PE
structures, without extensive hydrogen bonds,4 has not been
reported.
tetramers 1-3.17 At the same time, the protons expected to
experience no π-π stacking interactions (rings 2 and 3) were
observed to remain at ∆ppm ≈ 0 throughout the titration,
completely consistent with the expected folded structure.
Further, when all three oligomers are compared, the differences
in ∆ppm are also in agreement with expectations. Oligomer 2
is expected to fold better than 1 due to complimentary
electrostatics. Rings 1 and 4 of 2 are π-poor and π-rich,
respectively, while these two rings in 1 are both π-rich. The
electron-poor system of oligomer 3 has the largest ∆ppm for
rings 1 and 4, suggesting closer stacking interactions,13 although
π-poor systems may be more sensitive spectroscopically.18
The overall upfield shifting, or ∆ppm, of the signals corre-
sponding to the protons on rings 1 and 4 in tetramer 1 are
relatively small; however, it is clear that the signals from the
protons on rings 2 and 3 are not affected by a change in solvent
as evidenced in the top graph of Figure 2a. When the data for
tetramer 2 are examined (middle graph of Figure 2a), it is again
very clear that the signals from the protons on rings 2 and 3 do
not shift upfield upon solvent change, indicating no conforma-
tional change that moves them to within proximity of a
π-stacking event, which is perfectly consistent with the expected
helical structure. The data obtained by solvent titration for
tetramer 3 (bottom graph of Figure 2a) are even more dramatic.
It is clearly evident that the average upfield shifts (∆ppm) for
the signals corresponding to the protons on rings 1 and 4 are
greater than those for the signals corresponding to the protons
on rings 2 and 3, which strongly supports a helical folded
conformation.
Helical molecular models shown in Figure 2b19 predict and
confirm folded conformations for each tetramer; side chains have
been omitted for clarity. The variations in tetramer structures
are primarily seen in the slip-stacking angle and distance
between rings 1 and 4. A vertical line is shown for each tetramer
which is perpendicular to the plane of ring 4 along with a second
line extending from the center of ring 4 through the center of
ring 1. The angle between these lines helps approximate the
slip-stacking offset while the distances between rings are
measured through the center of each ring. Exact face to face
stacking of the rings would be indicated by an offset angle of
0° and a distance between rings similar to that of constrained
and π-stacked benzene rings, or 3.4 Å.20 Given the conforma-
tional constraints of this oPE system, the electronics and/or
dipoles of each ring should have an influence on the details of
the geometry of the stacked rings,13 which in turn impacts the
folded conformation.21
In comparison to mPE oligomers, few oPE sequences have
been synthesized,12c-e and no folding systems have been
reported thus far. Computational and simple torsional consid-
erations suggest that the oPE oligomers have a high probability
of folding even with very short sequences.13 Moreover, the
aspect ratios for folded mPE and oPE oligomers are considerably
different, leading to distinct geometric shapes. For example,
dodecamers of mPE and oPE would form pucks and tall
cylinders, respectively. Therefore, the ability to create oPE
sequences that fold is being explored, and this is our initial report
that confirms folding in these systems.
Results and Discussion
The oPE oligomers reported here were synthesized using
standard Sonogashira methods reported earlier12d in good yield
to afford three tetramers of different electronic compositions.
The oligomers shown in Figure 1 include an electron-rich
tetramer, 1 (Et4), where all of the Teg side chains are attached
to the oPE backbone through ethers, a mixed system, 2 (EsEt3),
with one electron-poor ester ring and three electron-rich ether
rings, and an electron-poor tetramer, 3 (Es4).
Previous work suggested halogenated solvents would promote
a predominantly random conformation14 while more polar
solvents drive a folded structure. If indeed these short tetramers
fold in solution, it is well documented that π-π stacking shifts
aryl protons upfield to smaller ppm values.16 A solvent titration
study shown in Figure 2a was conducted at constant temperature
and concentration to determine the effects of π-π stacking as
a function of solvent composition for the three tetramers. Each
graph represents a solvent titration series for each of the three
tetramers at increments of 10 vol % acetonitrile (ACN) in
chloroform (CDCl3) from 0% ACN to 100% ACN; all data were
referenced to the standard, tetramethylsilane. The ppm shifts
for protons a, b, and c of each ring were averaged to represent
a single data point per ring at each measured concentration.
The original 0% ACN (or 100% CDCl3) value was set to zero
to normalize all of the data, and then the change in ppm (∆ppm)
was plotted as a function of solvent composition.
∆ppm, when the solvent is changed from CDCl3 to ACN,
indicates a clear upfield shift for the aryl protons of rings 1 and
4 predicted to be involved in π-π stacking for all three
The repulsion that might be expected for the electron-rich
rings of tetramer 1 (Et4, top of Figure 2b) is observed by the
35° slip-stack angle between rings 1 and 4. For tetramers 2
(EsEt3) and 3 (Es4) the slip-stack angle is approximately 20°
and 11°, respectively. These predictions fall directly in line with
the data shown in Figure 2a. The angle of slip-stack or offset
should directly correlate with the degree of π-π stacking
(10) Matsuda, K.; Stone, M. T.; Moore, J. S. J. Am. Chem. Soc. 2002, 124,
11836.
(11) Brunsveld, L.; Prince, R. B.; Meijer, E. W.; Moore, J. S. Org. Lett. 2000,
2, 1525-1528.
(12) (a) Prince, R. B.; Saven, J. G.; Wolynes, P. G.; Moore, J. S. J. Am. Chem.
Soc. 1999, 121, 3114-3121. (b) Lahiri, S.; Thompson, J. L.; Moore, J. S.
J. Am. Chem. Soc. 2000, 122, 11315-11319. (c) Grubbs, R. H.; Kratz, D.
Chem. Ber. 1993, 126, 149-157. (d) Jones, T. V.; Blatchly, R. A.; Tew,
G. N. Org. Lett. 2003, 5, 3297-3299. (e) Shotwell, S.; Windscheif, P. M.;
Smith, M. D.; Bunz, U. H. F. Org. Lett. 2004, 6, 4151-4154.
(13) Blatchly, R. A.; Tew, G. N. J. Org. Chem. 2003, 68, 8780-8785.
(14) Hill, D. J.; Moore, J. S. Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 5053-
5057.
(17) The average ring chemical shift going from CDCl3 to ACN is +0.05 ppm
on the basis of model compounds such as the monomers, dimers, and
trimers, which cannot fold.
(18) Ghosh, S.; Ramakrishnan, S. Macromolecules 2005, 38, 676-686.
(19) Wavefunction-Spartan (molecular mechanics, MMFF minimization).
(20) Lee, M.; Shephard, M. J.; Risser, S. M.; Priyadarshy, S.; Paddon-Row:
M. N.; Beratan, D. M. J. Phys. Chem. A 2000, 104, 7593-7599.
(21) The structures shown in Figure 2b are the minimized conformations;
however, it should be noted that the system is dynamic, so this is really
only one snapshot.
(15) Neuhaus, D.; Williamson, M. The Nuclear OVerhauser Effect in Structural
and Conformational Analysis, 2nd ed.; John Wiley & Sons: New York,
2000.
(16) Pickholz, M.; Stafstrom, S. Chem. Phys. 2001, 270, 245-251.
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