7472 J . Org. Chem., Vol. 64, No. 20, 1999
Thompson et al.
(4S)-N-Ben zyloxyca r bon yl-4-[2-[N-2′,3′-O,O-(1-m eth yl-
eth ylid en e)a d en osyl-N-m eth yl]a m in oeth yl]oxa zolid in -5-
on e 11. A solution of iodide 10 (1.32 g, 3.52 mmol, 1.1 equiv)
in anhydrous acetonitrile (25 mL) was added to a stirred
solution of amine 4 (1.03 g, 3.22 mmol) and N,N-diisopropyl-
ethylamine (0.45 g, 0.61 mL, 3.5 mmol, 1.1 equiv) in the same
solvent (40 mL) under argon. The solution was heated at 55
°C for 2 d and then the solvent removed under vacuum and
the residue twice purified by flash column chromatography
on silica using (Et3N/MeOH/EtOAc, 1:1:98) and then (propan-
2-ol/DCM, 7.5:92.5) as eluent to give a pale yellow oil. This
product was twice dissolved in DCM and evaporated to yield
the title compound as a white foam (0.93 g, 51%): 1H NMR
(250 MHz, CDCl3) δ 8.29 (s, 1H), 7.87 (s, 1H), 7.40-7.20 (br s,
5H), 5.96 (d, 1H, J ) 2.1), 5.84 (s, 2H), 5.50-5.35 (br m, 2H),
5.20 (d, 1H, J ) 4.0), 5.13 (m, 2H), 4.83 (dd, 1H, J ) 4.0, 6.4),
4.35-4.19 (br m, 2H), 2.62-1.78 (br m, 9H), 1.54 (s, 3H), 1.33
(s, 3H); 13C NMR (60 MHz, CDCl3) δ 172.1, 155.7, 149.2, 128.7,
128.4, 128.3, 128.0, 127.7, 120.2, 114.5, 90.8, 84.9, 83.9, 83.3,
81.7, 67.5, 60.1, 59.3, 57.6, 57.0, 54.5, 52.9, 42.2, 41.0, 27.1,
(MeOH/EtOAc, 1:19) giving an oil. Ether was twice added and
evaporated to give the title compound as a white foam (125
mg, 33%): 1H NMR (250 MHz, CDCl3) δ 8.28 (s, 1H), 7.90 (s,
1H), 6.01 (d, 1H, J ) 1.8), 5.90 (s, 2H), 5.85-5.74 (br m, 1H),
5.44 (t, 1H, J ) 6.7), 4.4-4.2 (br m, 1H), 3.65 (d, 3H, J ) 3.7),
2.62-2.21 (br m, 4H), 2.16 (s, 3H), 1.94-1.66 (br m, 2H), 1.55
(s, 3H), 1.39-1.24 (br m, 12H); HRMS calcd for C24H37N7O7
536.2827, found 536.2833.
5′-Meth yla m in o-5′-d eoxy-2′,3′-O,O-ben zylid en ea d en o-
sin e 17a a n d 5′-Dim eth yla m in o-5′-d eoxy-2′,3′-O,O-ben -
zylid en ea d en osin e 17b. 2′,3′-O,O-Benzylidene adenosine
(0.31 g, 0.87 mmol) was dissolved in dry pyridine (4 mL) with
warming. This solution was cooled to -20 °C (freezer), and
then p-toluenesulfonyl chloride (183 mg, 0.96 mmol, 1.1 equiv)
was added. The mixture was kept at -20 °C for 3 d with
occasional shaking and then diluted with DCM (20 mL) and
washed with cold 3 M sulfuric acid (30 mL). The 5′-O-tosylate
16 (161 mg, 36%) was precipitated by addition of light
petroleum, filtered off, recrystallized from methanol, and used
directly in the next step without further purification. 5′-O-
Tosylate 16 (161 mg, 0.32 mmol) was transferred to a bomb,
and liquid methylamine (8 mL) was condensed onto it. The
bomb was sealed and the mixture stirred at room temperature
for 3 d. The excess amine was allowed to evaporate, and then
the residue was taken up in DCM (30 mL) and washed with
aqueous NaOH (0.75 M, 10 mL). The aqueous washings were
back-extracted with DCM (30 mL) and the combined organic
solutions evaporated. The crude mixture was then purified by
flash column chromatography (MeOH/DCM, 1:4). The major
product 17b eluted first (59 mg, 51%): 1H NMR (250 MHz,
CDCl3) δ 8.31 (s, 1H), 7.93 (s, 1H), 7.55-7.47 (m, 2H), 7.43-
7.32 (m, 3H), 6.16 (d, 1H, J ) 3), 5.98 (s, 1H), 5.65-5.53 (m,
3H), 5.02 (dd, 1H, J ) 2, 6), 4.57-4.48 (m, 1H), 2.70-2.48 (m,
2H), 2.23 (s, 6H); m/z (FAB) 383 (MH+). The anticipated
product 17a eluted later (31 mg, 27%): 1H NMR (250 MHz,
CDCl3) δ 8.28(s, 1H), 7.75 (s, 1H), 7.56-7.45 (m, 2H), 7.43-
7.30 (m, 3H), 6.08 (d, 1H, J ) 3), 5.99 (s, 1H), 5.90 (s, 2H),
5.62 (dd, 1H, J ) 3, 6.5), 5.11 (dd, 1H, J ) 2.1, 6.4), 4.51 (dt,
1H, J ) 2.1, 5), 2.95-2.82 (m, 2H), 2.40 (s, 3H); HRMS calcd
for C18H20N6O3 369.1675, found 369.1695.
5′-Dim eth yla m in o-5′-d eoxy-2′,3′-bis(ter t-bu tyld im eth -
ylsilyl)a d en osin e 19. 2′,3′-Bis(tert-butyldimethylsilyl)adenos-
ine 12 (230 mg, 0.46 mmol) was dissolved in dry pyridine (5
mL), and the solution was cooled to -20 °C. p-Toluenesulfonyl
chloride (133 mg, 0.70 mmol, 1.5 equiv) was added and the
mixture kept at -20 °C for 3 d with occasional shaking. The
solution was then diluted with DCM (40 mL) and washed with
cold 3 M sulfuric acid (30 mL). The DCM layer was transferred
to a bomb and the solvent evaporated under a stream of
nitrogen. Dimethylamine (5 mL) was then condensed onto the
crude 5′-O-tosylate and the bomb sealed. The mixture was
allowed to stir for 3 d at room temperature then the excess
amine allowed to evaporate. The residue was taken up in DCM
(30 mL) and washed with aqueous NaOH (0.75 M, 10 mL).
The aqueous layer was back-extracted with further DCM (10
mL), and then the combined DCM extracts were evaporated.
This crude product was purified by flash column chromatog-
raphy (MeOH/DCM, 1:9) to give the title compound as an off-
white solid (174 mg, 72% from 12): 1H NMR (250 MHz, CDCl3)
δ 8.21 (s, 1H,), 7.79 (s, 1H), 5.73 (d, 1H, J ) 5.2), 5.54 (s, 2H),
4.86 (t, 1H, J ) 4.4), 4.14-4.05 (m, 2H), 2.81-2.68 (m, 1H),
2.52-2.40 (m, 1H), 2.20 (s, 6H), 0.82 (s, 9H), 0.69 (s, 9H), 0.00
(s, 3H), -0.01 (s, 3H), -0.16 (s, 3H), -0.36 (s, 3H); 13C NMR
(100 MHz, CDCl3) δ 155.4, 152.8, 149.6, 140.6, 120.8, 90.0,
82.7, 74.3, 73.9, 61.7, 46.0, 25.9, 25.7, 18.1, 17.9, -4.3, -4.7,
-5.0; HRMS calcd for C24H47N6O3Si2 523.3248, found 523.3255.
Ben zyl N-Ben zyloxyca r b on yl-L-r-(2-iod oet h yl)glyci-
n a te 21. N-Benzyloxycarbonyl-L-glutamic acid R-benzyl ester
14 (0.37 g, 1.0 mmol) was dissolved in anhydrous carbon
tetrachloride (40 mL) under argon, and then iodobenzene
diacetate (0.18 g, 0.56 mmol, 0.55 equiv) and iodine (0.13 g,
0.51 mmol, 1.0 equiv) were added. The mixture was heated
(using an aluminum ring) at reflux for 90 min under irradia-
tion from two tungsten filament lamps (100 and 150 W).
Further portions of iodobenzene diacetate (0.18 g, 0.56 mmol,
25.3, 14.1; HRMS calcd for
568.2511.
C27H33N7O7 568.2520, found
5′-[N-[(3S)-3-Am in o-3-car boxypr opyl]-N-m eth ylam in o]-
5′-d eoxya d en osin e (Aza Ad oMet) 2. A solution of 11 (1.17
g, 2.06 mmol) in dry DCM (16 mL) was added via syringe to a
stirred mixture of boron trifluoride etherate (3.0 g, 2.6 mL,
21 mmol, 10 equiv) and ethanethiol (4.0 g, 4.8 mL, 62 mmol,
30 equiv) under nitrogen at 0 °C (ice bath). After 30 min, the
ice bath was removed and the reaction was continued at room
temperature for a further 23 h. Solvent was removed under
vacuum (using a KMnO4 trap) and the residue coevaporated
with methanol (3 × 10 mL) and then taken up in water (10
mL). This suspension was filtered and then lyophilized. The
sticky gum formed was taken up in water, filtered again, and
then loaded to a column of Dowex 50WX4-400 ion-exchange
resin (100 g). The column was washed with water (250 mL)
and then eluted with a gradient of NH4HCO3 (0-1.2 M in 3.0
L). Fractions from the major UV-active peak were collected
and evaporated under vacuum and then coevaporated with
water. The residue was redissolved in a small volume of water
and lyophilized to give pure analogue 2 as a white powder (535
mg, 68%): 1H NMR (400 MHz, D2O) δ 8.10 (s, 1H), 7.98 (s,
1H), 5.88 (d, 1H, J ) 5), 4.61 (t, 1H, J ) 5), 4.25-4.19 (m,
1H), 4.11 (t, 1H, J ) 5), 3.60 (dd, 1H), 2.88-2.76 (m, 2H), 2.73-
2.61 (m, 2H), 2.27 (s, 3H), 2.01-1.91 (m, 1H), 1.88-1.78 (m,
1H); 13C NMR (100 MHz, D2O) δ 174.0, 154.7, 152.0, 147.9,
139.4, 118.1, 87.5, 79.9, 72.6, 71.3, 58.5, 53.8, 53.5, 40.2, 25.7;
HRMS calcd for C15H24N7O5 382.1839, found 382.1933.
p Ka Deter m in a tion for Aza Ad oMet 2. AzaAdoMet 2 (20
mg) was dissolved in 10% D2O in H2O (500 mm3) at pH 3.0
ionic strength 10 mM (KCl) and acetone (2 mm3) added as the
NMR internal reference (δ ) 2.214). Proton spectra were
recorded at 500.13 MHz on a Bruker AMX 500 spectrometer
at 298 K. An aliquot of KOH (0.01 M) was added, the solution
homogenized, and the pH determined at 298 K in the NMR
tube using a Russell RL150 pH meter model fitted with a
combination glass electrode (error ( 0.03 pH unit). This
process was repeated stepwise to give 26 data points in the
range 3 < pH < 11.4. The chemical shift for the N-methyl
signal of 2 was plotted as a function of pH (adjusted to
compensate for the D2O-H2O mixture)35 (Figure 6) and
analyzed for two overlapping pKa values using18 Kaleidagraph
to give values of 7.08 ( 0.07 and 9.66 ( 0.31 (Figure 6).
Meth yl [4-[N-2′,3′-O,O-(1-m eth yleth ylid en e)a d en osyl-
N -m e t h yl]a m in o]-2-(t er t -b u t yloxyca r b on yla m in o)b u -
ta n oa te 15. Amine 4 (0.23 g, 0.72 mmol) was dissolved in dry
acetonitrile (15 mL) under nitrogen and then N,N-diisopro-
pylethylamine (0.15 g, 0.20 mL, 1.16 mmol, 1.6 equiv) added
followed by a solution of bromide 12 (0.34 g, 1.15 mmol, 1.6
equiv) in dry acetonitrile (10 mL). The solution was heated at
55 °C for 3 d, and then the solvent was removed under vacuum
and the residue purified by flash column chromatography
(35) Glasoe, P. K.; Long, F. A. J . Phys. Chem. 1960, 64, 188.