Synthesis of Cluster Mannosides Carrying a Photolabile Diazirine Group
and the reaction mixture was left standing overnight at 4 °C. solved in a 1:1 mixture of MeOH and THF (10 mL) and mixed
FULL PAPER
Dichloromethane (20 mL) was added, the organic phase was sepa-
rated, the aqueous phase was extracted with dichloromethane and
the combined organic phases were dried with sodium sulfate. After
filtration and concentration, flash column chromatography (cyclo-
hexane/ethyl acetate, 3:1) yielded 11 (170 mg, 0.13 mmol, 56%) as
with sodium methoxide solution (1 m in MeOH, 37 µL). The reac-
tion mixture was stirred for 1 h at room temp., neutralized with
Amberlite ion-exchange resin IR 120, filtered and purified by
HPLC (Merck RP-8, 7 µm; MeCN/H2O, 10:90). After lyophilis-
ation 13 was obtained as a colorless foam (17 mg, 30 µmol, 65%).
a yellowish solid. [α]2D0 = –16.1 (c = 0.88, CHCl ). IR (KBr): ν
1H NMR (500 MHz, D2O): δ = 4.83 (br. s, 2 H, 2 H-1), 4.02–3.43
˜
3
NCS
= 2104.4 cm–1. 1H NMR (500 MHz, CDCl3): δ = 8.07–7.14 (m, 40 (m, 20 H, 2 H-2, 2 H-3, 2 H-4, 2 H-5, 2 H-6, 2 H-6Ј, OCH2
,
man
3
H, HBz), 6.15–6.06 (m, J4,5 = 10.1 Hz, 2 H, H-4man1, H-4man2), CH2NH), 2.32 (br. s, 1 H, CH), 1.06 (s, 3 H, CH3) ppm. 13C NMR
3
3
5.81 (dd, J3,4 = 10.1 Hz, 2 H, H-3man1, H-3man2), 5.68 (dd, J2,3
=
(125.75, D2O): δ = 102.42 (C-1), 75.25 (C-5), 73.03 (C-3), 72.41 (C-
3.2 Hz, 2 H, H-2man1, H-2man2), 5.11 (d, J1,2 = 1.5 Hz, 1 H, H- 2), 69.18 (C-4), 68.77, 68.62 (OCH2man), 63.30 (C-6), 40.90 (CH),
3
1man1*), 5.09 (d, 1 H, H-1man2*), 4.74 –4.63 (m, J6Ј,6 = 12.3 Hz, 2
19.32 (CH3) ppm. MALDI-TOF MS (DHB): m/z = 551.4 [M +
3
H, H-6Јman1, H-6Јman2), 4.52–4.45 (m, 2 H, H-6man1, H-6man2), Na – N2]+ (calcd. m/z = 551.57) for C20H36N2NaO12S; m/z = 529.3
4.42–4.37 (m, J5,6Ј = 2.5 Hz, 2 H, H-5man1, H-5man2), 4.02–3.88 [M – N2]+ (calcd. m/z = 528.58) for C20H36N2O12S. ESI MS: m/z =
3
(m, 3 H, CH2Oman1*, CHH–NCS), 3.83–3.77 (m, 1 H, CHH– 579.1985 [M + Na]+ (calcd. m/z = 579.1943) for C20H36N4NaO12S.
NCS), 3.63 (dd, 1 H, CH2Oman2*), 2.50 (br. quint, 1 H, CH) ppm.
1,3-Bis(2Ј,3Ј,4Ј,6Ј-tetra-O-benzoyl-α-
azipropylthiourenyl-2ЈЈЈ,3ЈЈЈ,4ЈЈЈ-tri-O-acetyl-6ЈЈЈ-deoxy-6ЈЈЈ-thio-
urenylmethyl-α- -mannopyranos-6ЈЈЈ-yl)propane (16): The azide 10
D-mannopyranosyloxy)-2-(2ЈЈ-
13C NMR (125.75 MHz, CDCl3): δ = 165.54, 165.52, 165.51,
165.48, 165.34, 165.33 (8 C=O), 133.49, 133.44, 133.40, 133.21,
133.12, 133.09, 130.02, 129.94, 129.87, 129.85, 129.75, 129.71,
129.18, 129.17, 128.98, 128.95, 128.89, 128.62, 128.57,
D
(600 mg, 0.47 mmol) was dissolved in dry THF (5 mL) under argon
atmosphere at 0 °C and mixed with a solution of triphenylphos-
phane (244 mg, 0.93 mmol) in dry THF (2 mL). The mixture was
stirred at 0 °C for 0.5 h, then at room temp. for another 0.5 h. The
diazirine-labeled mannose derivative 15 (232 mg, 0.49 mmol), dis-
solved in dry THF (2 mL) and DIPEA (50 µL), was added to the
reaction mixture together with water (2 mL). The solution was
stirred at room temp. for 5 h, then concentrated in vacuo. Two puri-
fication steps (flash column chromatography first with cyclohex-
ane/ethyl acetate, 2:1 Ǟ 3:2, then cyclohexane/ethyl acetate, 1:1)
led to the pure product (188 mg, 0.11 mmol, 23%) as an amorph-
ous solid. [α]2D0 = –4.1 (c = 1.25, H2O). 1H NMR (500 MHz,
CDCl3): δ = 8.18–7.27 (m, 40 H, HBz), 8.11 (br. s, 1 H, NH), 7.20
(br. s, 1 H, NH), 6.29–6.22 (m, 2 H, H-4man1, H-4Bzman2), 6.11 (br.
s, 1 H, H-1man3), 6.03–5.97 (m, 2 H, H-3man1, H-3man2), 5.91–5.87
128.49,128.42, 128.41, 128.31, 128.29 (CBz), 98.18, 98.09 (C-1man1
,
C-1man2), 70.18, 70.15 (C-3man1, C-3man2), 70.11, 70.05 (C-2man1, C-
2man2), 69.41, 69.39 (C-5man1, C-5man2), 66.59, 66.52 (C-4man1, C-
4man2), 65.90, 65.85 (CH2Oman1, CH2Oman2), 62.70, 62.66 (C-6man1
,
C-6man2), 43.76 (CH2NCS), 39.72 (CH) ppm. MALDI-TOF MS:
m / z = 1 3 2 7 . 0 [ M + N a ] + ( c a l c d . m / z = 1 3 2 6 . 3 4 ) f o r
C73H61NNaO20S; m/z = 1342.9 [M + K]+ (calcd. m/z = 1342.29 for
C73H61KNO20S).
2-(2Ј-Azipropylthiourenyl)-1,3-bis(2ЈЈ,3ЈЈ,4ЈЈ,6ЈЈ-tetra-O-benzoyl-α-
D-mannopyranosyloxy)propane (12): The isothiocyanate 11 (149 mg,
0.11 mmol) was dissolved in dry dichloromethane (2 mL) and
mixed with 4 (14 mg, 0.11 mmol) and a solution (50 µL) of DIPEA
in dry dichloromethane (0.5 mL). The reaction mixture was strirred
at room temp. for 4 h, then the solvent was removed in vacuo. Puri-
fication of the residual syrup by column chromatography (cyclo-
hexane/ethyl acetate, 2:1) yielded 12 (76 mg, 0.06 mmol, 48%) as a
colorless solid. [α]2D0 = –14.6 (c = 0.52, CHCl3). 1H NMR
(500 MHz, CDCl3): δ = 8.13–7.15 (m, 40 H, HBz), 6.81 (NHdiazirine),
(m, 2 H, H-2man1, H-2man2), 5.38–5.30 (m, 3 H, H-1man1, H-1man2
,
H-3man3), 5.27 (tϷdd, 1 H, H-2man3), 5.07 (t, 1 H, H-4man3), 4.87–
5.75 (m, 4 H, H-6Јman1, H-6Јman2, H-5man1, H-5man2), 4.70–4.62 (m,
2 H, H-6man1, H-6man2), 4.27–4.19 (m, 2 H, CHHOm an 1
,
CHHOman2), 4.06–3.90 (m, 6 H, H-5man3, H-6man3, H-6Јman3, CH–
6.62 (NH–CH2core), 6.22 (t, 3J4,5 = 10.2 Hz, 2 H, H-4man1, H-4man2), CHHNH, CHHOm a n 1 , CHHOm a n 2 ), 3.77–3.63 [m, 3 H,
3
3
5.88 (dd, J3,4 = 10.2 Hz, 1 H, H-3man1*), 5.82–5.75 (m, J2,3
=
CH2C(NN), CH–CHHNH], 2.73 (sept, 1 H, CH), 2.04, 1.98, 1.95
3.1 Hz, 3 H, H-2man1, H-2man2, H-3man2*), 5.20 (d, J1,2 = 1.5 Hz, [each br. s, each 3 H, 3 C(O)CH3], 1.04 (s, 3 H, CH3) ppm; man1,2:
3
1 H, H-1man1*), 5.18 (d, 1 H, H-1man2*), 4.83–4.73 (m, J6,6Ј
=
3J1,2 = 1.6, 3J2,3 = 3.3, 3J3,4 = 9.9, 3J4,5 = 9.9; man3: 3J2,3 = 3.4, 3J3,4
2
12.1 Hz, 2 H, H-6Јman1, H-6Јman2), 4.63–4.54 (m, J5,6 = 3.9, J5,6Ј = 7.9, 3J4,5 = 7.9; core: 3JCHCHH = 5.7 Hz. 13C NMR (125.75 MHz,
= 2.4 Hz, 4 H, H-5man1, H-5man2, H-6man1, H-6man2), 4.36–4.26 [m, CDCl3): δ = 170.22, 170.13, 170.09 (3 C=OAc), 166.43, 166.39,
1 H, NHCHHC(NN)], 4.21 (dd, 1 H, CHHOman1*), 4.12 (dd, 1 H, 166.01, 165.86, 165.85, 165.72, 165.71 (8 C=OBz), 134.40, 134.19,
CHHOman2*), 3.97–3.89 [m, 1 H, NHCHHC(NN)], 3.83–3.74 (m, 134.15, 134.09, 134.04, 134.02, 131.05, 130.43, 130.42, 130.40,
3
3
3 H, CHHOman1, CHHOman2, CHHNH), 3.59 (dd, 1 H, CHHNH),
2.56 (sept, 1 H, CH), 1.06 (s, 3 H, CH3) ppm. 13 C NMR
(125.75 MHz, CDCl3): δ = 184.10 (C=S), 166.27, 166.20, 166.16,
130.37, 130.36, 130.34, 130.19, 130.18, 130.15, 129.57, 129.51,
129.30, 129.29, 129.21, 129.19 (CBz), 99.09, 98.97 (C-1man1, C-
1man1), 79.97 (C-1man3), 71.66 (C-3man1, C-3man2), 71.23, 71.15 (C-
165.54, 165.51, 165.46 (8 C=O), 133.55, 133.49, 133.38, 133.36, 2man1, C-2man2), 69.97, 69.92 (C-5man1, C-5man2), 69.74 (C-2man3),
133.26, 133.13, 133.07, 129.90, 129.88, 129.77, 129.76, 129.71, 69.40 (C-3man3), 68.54 (C-4man3), 67.95, 67.88 (CH2Oman1
,
129.14, 129.04, 128.95, 128.87, 128.58, 128.57, 128.51, 128.48, CH2Oman2), 67.29 (C-4man1, C-4man1), 63.35 (C-6man1, C-6man2),
128.46, 128.37, 128.30, 128.29 (CBz), 98.09, 98.01 (C-1man1, C- 47.76 [CH2C(NN)], 45.29 (C-6man3), 43.44 (CHCH2NH), 40.10
1man2), 70.74, 70.68 (C-3man1, C-3man2), 70.34, 70.22 (C-2man1, C-
2man2), 69.87 (CH2Oman1*), 69.61, 69.46 (C-5man1, C-5man2), 69.28
(CH2Oman2*), 66.30, 66.26 (C-4man1, C-4man2), 62.76, 62.73 (C-
6man1, C-6man2), 47.72 (CH2NHcore), 46.43 [NHCH2C(NN)], 38.81
(CH), 25.85 [C(NN)], 18.19 (CH3) ppm. MALDI-TOF MS (nor-
harmane): m/z = 1384.7 [M + Na – N2]+ (calcd. m/z = 1384.41) for
C76H68N2NaO20S, m/z = 1361.7 [M – N2]+ (calcd. m/z = 1361.47)
for C76H68N2O20S.
(CH), 26.45 [C(NN)], 20.72, 20.64, 20.53 [3 C(O)CH3], 18.30
(CH3) ppm.
1,3-Bis(α-
oxy-6ЈЈ-thiourenylmethyl-α-
D
-mannopyranosyloxy)-2-(2Ј-azipropylthiourenyl-6ЈЈ-de-
-mannopyranos-6ЈЈ-yl)propane (17):
D
The protected cluster 16 (180 mg, 0.1 mmol) was dissolved in dry
MeOH (2 mL) and sodium methoxide (1 m in MeOH, 114 µL) was
added. The reaction mixture was stirred at room temp. or 1 h, then
the solution was neutralized with Amberlite ion exchanger IR 120,
[2-(2Ј-Azipropylthiourenyl)-1,3-bis(α-
propane (13): The protected derivative 12 (65 mg, 47µmol) was dis-
D
-mannopyranosyloxy)]- filtered, and concentrated. The residue was purified by HPLC
(Merck RP-8, 7 µm; MeCN/H2O, 15:85). Lyophilisation led to 17
Eur. J. Org. Chem. 2006, 719–728
© 2006 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim
www.eurjoc.org
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