Journal of Medicinal Chemistry
Article
positive ion mode in a MALDI LTQ-XL Orbitrap (Thermo-Scientific,
San Jose, CA) using a laser energy fixed at 6 μJ and a mass resolution
of 60 000 at an m/z of 400 Th. Combustion analysis was performed by
Atlantic Microlab, Inc. (Norcross, GA), and the results agree within
0.4% of the calculated values, unless indicated otherwise (S.I.).
Melting point determination was conducted using a Thomas-Hoover
melting point apparatus; the melting points are uncorrected. On the
basis of NMR, HRMS, HPLC, and combustion data, all final
compounds are >95% pure.
(S)-1-(3-((4-(1,3-Dioxoisoindolin-2-yl)phenethyl)(methyl)-
amino)propyl)-1-(4-fluorophenyl)-1,3-dihydroisobenzofuran-
5-carbonitrile (12). (S)-N-Desmethylcitalopram31,32 (11, 0.164 g,
0.53 mmol) and 2-(4-(1,3-dioxoisoindolin-2-yl)phenyl)acetaldehyde37
(10, 0.140 g, 0.53 mmol) were mixed in 1,2-dichloroethane (10 mL)
and then treated with sodium triacetoxyborohydride (0.167 g, 0.79
mmol) and HOAc (0.2 mL). The mixture was then stirred at RT for 6
h under an inert atmosphere. The reaction mixture was quenched with
2 N aq NaOH (10 mL) and extracted with EtOAc (3 × 20 mL). The
combined organic layers were then dried over Na2SO4 and
concentrated in vacuo. Purification by flash column chromatography
eluting with 2:8 acetone/CHCl3 provided 0.235 g of tertiary amine 12
(80%). 1H NMR (400 MHz, CDCl3) δ 7.89 (dd, J = 5.2, 3.2 Hz, 2H),
7.73 (dd, J = 5.2, 3.2 Hz, 2H), 7.54 (d, J = 7.6 Hz, 1H), 7.45−7.28 (m,
8H), 6.98−6.94 (m, 2H), 5.16 (d, J = 12.8 Hz, 1H), 5.11 (d, J = 12.4
Hz, 1H), 2.76−2.72 (m, 2H), 2.55−2.51 (m, 2H), 2.35 (t, J = 6.8 Hz,
2H), 2.19−2.06 (m, 5H), 1.48−1.30 (m, 2H). 13C NMR (100 MHz,
CDCl3) δ 167.2, 161.9 (d, J = 244.8 Hz), 149.4, 140.6, 140.2, 139.7,
139.6, 134.3, 131.8, 131.7, 129.5, 129.3, 126.7 (d, J = 7.6 Hz), 126.4,
125.1, 123.6, 122.8, 118.6, 115.2 (d, J = 21.2 Hz), 111.5, 91.0, 71.2,
58.9, 57.2, 41.9, 38.9, 33.2, 21.8.
reaction mixture was then stirred for 45 min at 0−5 °C. NaN3 (0.111
g, 1.71 mmol) and anhydrous ether (3 mL) was then added to the
reaction mixture, followed by stirring for 1 h at 0−5 °C, and the
mixture was then diluted with H2O and ether (10 mL each). The
organic layer was separated, dried, concentrated, and purified by flash
chromatography using 3:7 acetone/CHCl3 to provide 0.086 g of azide
15 as an oil (87%). 1H NMR (400 MHz, CDCl3) δ 7.59 (d, J = 7.2 Hz,
2H), 7.49 (s, 1H), 7.37 (dd, J = 8.4, 5.6 Hz, 2H), 7.33 (d, J = 8.4 Hz,
1H), 7.16 (d, J = 8.4 Hz, 1H), 7.02−6.98 (m, 3H), 5.18 (d, J = 12.8
Hz, 1H), 5.13 (d, J = 13.2 Hz, 1H), 2.67−2.63 (m, 2H), 2.53−2.49
(m, 2H), 2.39−2.35 (m, 2H), 2.20−2.02 (m, 5H), 1.51−1.26 (m, 2H).
13C NMR (100 MHz, CDCl3) δ 162.3 (d, J = 245.7 Hz), 148.7, 141.2,
140.0, 138.6, 132.3, 130.2, 126.7 (d, J = 8.3 Hz), 125.5, 122.8, 118.9,
118.6, 115.8 (d, J = 21.2 Hz), 112.3, 90.7, 88.2, 71.4, 57.0, 56.0, 53.9,
39.8, 37.9, 29.4, 19.4. IR: azide, 2112 cm−1; HRMS calcd for
C27H25FIN5O [M + H+], 582.1160; found, 582.1159. Anal.
(C27H25FIN5O·2.5H2O): C, H, N.
(S)-N-((1-(3-(Dimethylamino)propyl)-1-(4-fluorophenyl)-1,3-
dihydroisobenzofuran-5-yl)methyl)-3-(4-(1,3-dioxoisoindolin-
2-yl)phenyl)propanamide (19). A mixture of carboxylic acid 1738
(0.257 g, 0.87 mmol) and thionyl chloride (2 mL) was stirred at reflux
for 3 h and then concentrated in vacuo. The remaining thionyl
chloride was removed by azeotropic distillation using benzene. The
crude solid was dissolved in the CHCl3 and added dropwise to a
vigorously stirred mixture of amine 1831,32 (0.395 g, 0.73 mmol),
CHCl3 (10 mL), and 0.5 M aq NaOH (10 mL) at 0 °C, followed by
stirring for 3 h at RT. The organic layer was separated, dried, and
purified by flash chromatography using 6:94 MeOH/CHCl3 eluent to
provide 0.425 g of amide 19 as a white solid (97%), mp 114−115 °C.
1H NMR (400 MHz, CDCl3) δ 7.92−7.88 (m, 2H), 7.78−7.74 (m,
(S)-1-(3-((4-Aminophenethyl)(methyl)amino)propyl)-1-(4-
fluorophenyl)-1,3-dihydroisobenzofuran-5-carbonitrile (13).
Hydrazine (0.092 g, 2.88 mmol) was added to a solution of
phthalimide 12 (0.538 g, 0.96 mmol) in EtOH (20 mL). The reaction
mixture was subsequently stirred at reflux for 3 h, concentrated, and
diluted with 30% aq K2CO3. The crude mixture was extracted (3 × 20
mL) with CHCl3, concentrated, and purified by flash column
chromatography using 2.5:7.5 acetone/CHCl3 to provide 0.395 g of
2H), 7.45−7.40 (m, 2H), 7.31−7.21 (m, 5H), 7.08−7.04 (m, 2H),
6.96−6.90 (m, 2H), 6.35 (d, J = 6.0 Hz, 1H), 5.10 (d, J = 12.4 Hz,
1H), 5.06 (d, J = 12.4 Hz, 1H), 4.35 (d, J = 5.6 Hz, 2H), 3.02−2.98
(m, 2H), 2.51−2.47 (m, 2H), 2.25−2.21 (m, 2H), 2.19−2.06 (m, 8H),
1.48−1.29 (m, 2H). 13C NMR (100 MHz, CDCl3) δ 171.8, 167.3,
161.7 (d, J = 243.3 Hz), 143.4, 141.1, 141.0, 139.6, 138.2, 134.5, 131.7,
129.8, 129.2, 127.2, 126.8 (d, J = 7.6 Hz), 126.7, 123.7, 122.0, 120.6,
114.9 (d, J = 21.2 Hz), 90.7, 71.7, 59.5, 45.1, 43.3, 39.3, 39.0, 31.2,
22.1.
1
aniline 13 (96%). H NMR of the oxalate salt (400 MHz, CD3OD) δ
7.70−7.55 (m, 5H), 7.13−7.05 (m, 5H), 6.93 (d, J = 6.8 Hz, 1H), 5.24
(d, J = 13.2 Hz, 1H), 5.17 (d, J = 13.6 Hz, 1H), 3.23−3.21 (m, 4H),
2.92−2.88 (m, 2H), 2.81 (s, 3H), 2.35−2.20 (m, 2H), 1.71−1.62 (m,
2H). 13C NMR of oxalate salt (100 MHz, CD3OD) δ 164.6 (d, J =
243.3 Hz), 150.3, 141.7, 140.7, 133.24, 130.9, 128.2 (d, J = 8.3 Hz),
126.7, 124.3, 119.5, 116.4 (d, J = 24.3 Hz), 113.1, 92.0, 72.5, 58.2, 57.1,
40.5, 38.5, 30.6, 20.5. The oxalate salt was precipitated from acetone;
mp 122−123 °C. Anal. (C27H28FN3O·2C2H2O4·H2O) C, H, N.
(S)-1-(3-((4-Amino-3-iodophenethyl)(methyl)amino)propyl)-
1-(4-fluorophenyl)-1,3-dihydroisobenzofuran-5-carbonitrile
(14). A 1 M solution of ICl in CH2Cl2 (0.085 g, 0.64 mmol) was
added dropwise to a solution of aniline 13 (0.230 g, 0.53 mmol) in
CH2Cl2 at 0−5 °C. The reaction mixture was allowed to warm to RT
and stirred overnight. The reaction mixture was then quenched with
10% aq sodium thiosulfate. The organic layer was collected, dried,
concentrated, and purified by flash chromatography using 2:8 acetone/
(S)-3-(4-Aminophenyl)-N-((1-(3-(dimethylamino)propyl)-1-
(4-fluorophenyl)-1,3-dihydroisobenzofuran-5-yl)methyl)-
propanamide (20). Hydrazine (0.069 g, 2.15 mmol) was added to a
solution of phthalimide 19 (0.425 g, 0.72 mmol) in EtOH (15 mL).
The reaction mixture was stirred at reflux for 6 h, concentrated, and
diluted with a 30% aq K2CO3 solution. The organic layer was
extracted, dried, and purified by flash chromatography using 8:92
MeOH/CHCl3 to provide 0.301 g of aniline 20 (88%). 1H NMR (400
MHz, CDCl3) δ 7.46−7.42 (m, 2H), 7.20 (d, J = 7.6 Hz, 1H), 7.06 (d,
J = 8.0 Hz, 1H), 7.00−6.94 (m, 5H), 6.58−6.54 (m, 2H), 5.62 (m,
1H), 5.12 (d, J = 12.4 Hz, 1H), 5.08 (d, J = 12.4 Hz, 1H), 4.37 (d, J =
5.6 Hz, 2H), 3.58 (bs, 2H), 2.88−2.85 (m, 2H), 2.47−2.43 (m, 2H),
2.26−2.06 (10H), 1.49−1.29 (m, 2H). 13C NMR (100 MHz, CDCl3)
δ 172.3, 161.9 (d, J = 244.1 Hz), 144.8, 143.5, 141.2, 141.2, 139.8,
138.2, 130.6, 129.4, 127.3, 126.9 (d, J = 8.3 Hz), 122.1, 120.7, 115.4,
115.1 (d, J = 21.2 Hz), 90.9, 71.9, 59.8, 50.9, 45.5, 43.4, 39.5, 39.0,
31.0, 22.4. The hygroscopic oxalate salt was precipitated from acetone.
Anal. (C29H34Cl2FN3O2·2C2H2O4·5H2O): C, H, N.
1
CHCl3 to give 0.095 g of iodide 14 (32%). H NMR (400 MHz,
CDCl3) δ 7.59 (d, J = 8.4 Hz, 1H), 7.49−7.41 (m, 5H), 7.04−6.99 (m,
2H), 6.92 (dd, J = 8.0, 2 Hz, 1H), 6.67 (d, J = 8.0 Hz, 1H), 5.20 (d, J =
13.6 Hz, 1H), 5.14 (d, J = 12.8 Hz, 1H), 2.75−2.69 (m, 6H), 2.40 (s,
3H), 2.28−2.15 (m, 2H), 1.61−1.48 (m, 2H). 13C NMR (100 MHz,
CDCl3) δ 162.2 (d, J = 245.6 Hz), 149.3, 145.5, 140.3, 139.3, 139.3,
138.9, 132.2, 129.9, 126.9 (d, J = 8.3 Hz), 125.4, 123.0, 118.8, 115.6
(d, J = 21.3 Hz), 114.9, 112.0, 91.1, 84.3, 71.5, 58.4, 56.6, 41.2, 38.8,
30.9, 20.8. The oxalate salt was precipitated from acetone, mp 60−61
°C. HRMS calcd for C27H27FIN3O [M + H+], 556.1251; found,
556.1252.
(S)-3-(4-Amino-3-iodophenyl)-N-((1-(3-(dimethylamino)-
propyl)-1-(4-fluorophenyl)-1,3-dihydroisobenzofuran-5-yl)-
methyl)propanamide (21). A 1.0 M solution of ICl in CH2Cl2
(0.083 g, 0.63 mmol) was added dropwise to a solution of aniline 20
(0.231 g, 0.48 mmol) in CH2Cl2 (15 mL) at 0−5 °C over 30 min. The
reaction mixture was allowed to warm to RT and stirred overnight.
The reaction mixture was then diluted with 10% aq Na2S2O3 (25 mL),
stirred for 10 min, and extracted in CH2Cl2. After discarding the
aqueous layer, the black residue was dissolved in MeOH and
combined with the previous CH2Cl2 solution. The organic layer was
concentrated and purified by flash chromatography using 7:93
(S)-1-(3-((4-Azido-3-iodophenethyl)(methyl)amino)propyl)-
1-(4-fluorophenyl)-1,3-dihydroisobenzofuran-5-carbonitrile
(15). To a solution of aniline 14 (0.095 g, 0.17 mmol) in TFA (3 mL)
was added NaNO2 (0.023 g, 0.34 mmol) at 0 °C, in the dark. The
1
MeOH/CHCl3 to provide 0.292 g of iodide 21 as an oil (62%). H
NMR (400 MHz, CDCl3) δ 7.56−7.51 (m, 2H), 7.46 (d, J = 1.6 Hz,
G
J. Med. Chem. XXXX, XXX, XXX−XXX