Driscoll et al.
Article
Photomasks. Custom fabricated photomasks were obtained
fromAdtek Photomask (Montreal, Canada). The specified design
and dimensions were printed on soda lime glass (300 ꢀ 300 ꢀ 0.0600)
using a chrome coating. The masks were rinsed thoroughly with
distilled water and ethanol after each use.
Fluorescence Microscopy. Patterned surfaces were examined
byfluorescencemicroscopy. Fluorescent imageswere obtainedon
a Nikon (Melville, NY) Eclipse model E600 fluorescence micro-
scope equipped with a Diagnostic Instruments (Sterling Heights,
MI) RT Color digital camera and Spot (v. 4.0) analysis software.
Samples were observed using a Nikon Plan Fluor 10X (N = 0.50)
Ph1 DLL lens. Illumination was provided by a 100 W mercury arc
lamp (Chiu Technical Corporation, Kings Park, NY) passed
through either a Nikon FITC-HYQ (excitation filter, 460-
500 nm; dichroic mirror cut on, 505 nm; barrier filter, 510-560
nm) filter cube for green fluorescence or a Nikon Texas Red HQ
(excitation filter, 532-587 nm; dichroic mirror cut on, 595 nm;
barrier filter, 608-683 nm) filter cube for red fluorescence.
Samples were observed in a darkened room to reduce stray light.
Patterned surfaces were prepared for microscopy analysis using a
method to remove the pattern from the surface and eliminate
electron transfer fluorescence quenching by the gold substrates.
Slides were coated with strips of Scotch brand Transparent tape
from 3M (St. Paul, MN) and incubated at 80 °C for 5 min to
facilitate pattern transfer. The tape was carefully removed from
the surface and adhered to a standard glass microscope slide for
analysis and imaging.
Surface Activation and Multilayered Film Assembly.
Irradiated substrates were exposed to a freshly prepared solu-
tion of 0.1 M EDC and 0.02 M NHS in deionized water for 30 min
while agitating with a Thermo Scientific (Waltham, MA)
Barnstead/Lab-line lab rotator on low speed to facilitate the
reaction. Following activation, the substrates were rinsed with
deionized water, dried with nitrogen, and placed in a 0.01 M
ethanolic solution of a fluorescent compound (rhodamine 110 or
cresyl violet 670) for 10 min (with agitation) to complete the
surface reaction. Longer exposure times resulted in nonspecific
attachmentofthe fluorophoretothesubstrate, which wasdifficult
to completely remove by rinsing with solvent. After amide bond
formation, the samples were thoroughly rinsed with ethanol and
dried with nitrogen. Patterned surfaces were shielded from light
during this process to protect the photolabile group.
Contact Angle Goniometry. Sessile drop contact angle mea-
surements were made using a Rame-Hart Model 300 Goniometer
(Netcong, NJ). Measurements were obtained using 1 μL drops of
deionized water deposited on the substrates using the Automated
Dispensing System accessory coupled to the goniometer. Images
were obtained by an integrated digital camera and the entire
system was under computer control using Rame-Hart’s DROP-
image Standard (v. 2.0.10) software package. The software auto-
matically provides contact angle measurements once the liquid is
dispensed. Five measurements were taken per substrate for five
different samples (25 total measurements for each type of modi-
fied surface) and the results were averaged.
Infrared Spectroscopy. Grazing incidence infrared spectra
were obtained using a Thermo Electron (Waltham, MA) Nicolet
FT-IR model 6700 spectrometer equipped with a Thermo Nico-
let grazing angle accessory and a liquid nitrogen cooled mercury
cadmium telluride (MCT) detector. The incident IR beam was at
75° to the gold substrates. Prior to measurement the optical path
was purged with a stream of nitrogen for 30 min, and purging was
continued during the experiments. A clean, bare gold slide was
used as the background, and a new background was collected
immediately prior to each sample run. The scan range was from
4000 to 600 cm-1, and 64 scans were collected for each sample.
The spectra were automatically corrected for H2O and CO2, and a
manual baseline correction was performed after each experiment.
Cyclic Voltammetry (CV). Electrochemistry experiments
were carried out using a Gamry Instruments (Warminster, PA)
Reference 600 potentiostat/galvanostat/ZRA. A typical three-
electrode cell was employed with the SAM functioning as the
working electrode, a platinum wire as the counter electrode, and
referenced against a standard saturated calomel electrode (SCE). An
alligator clip was used to attach the gold slide to the cell, and a surface
area of 1 cm2 was placed in the electrolyte solution. The electrolyte
was an aqueous 1 mM potassium ferricyanide solution with 0.1 M
potassium chloride as supporting electrolyte. Voltammograms were
obtained from -0.3 to þ0.7 V at a scan rate of 50 mV/s.
Synthetic Details. 2-Nitrobenzyl-11-mercaptoundecanoate
(Photolabile Compound). One equivalent of 2-nitrobenzyl
alcohol (2.17 g, 14.15 mmol) was combined with 1 equiv of 11-
mercaptoundecanoic acid (3.09 g, 14.15 mmol) and 0.1 equiv of
DMAP (0.173 g, 1.42 mmol) and dissolved in dichloromethane
(50 mL). To this mixture was slowly added a solution of DCC
(2.92 g, 14.15 mmol) in dichloromethane (30 mL) while stirring.
Upon addition, a white precipitate formed after a few minutes.
The mixture was stirred at room temperature overnight. Vacuum
filtration removed the white precipitate and the filtrate was
concentrated under vacuum. Silica gel column chromatography
was employed for purification using dichloromethane/methanol
(v/v 50:1) as eluent. The product was dried over sodium sulfate,
the solvent removed by rotary evaporation, and dried under
vacuum, producing a yellow solid. Yield: 3.57 g (71%). 1H
NMR (CDCl3), δ (ppm): 8.1 (d, 1H, Ar), 7.6 (t, 1H, Ar), 7.5
(d, 1H, Ar), 7.4 (t, 1H, Ar), 5.5 (s, 2H, O-CH2), 2.6 (t, 1H, SH) 2.5
(q, 2H, CH2-SH), 2.4 (t, 2H, CH2-CdO), 1.6 (m, 4H, CH2), 1.2
(m, 12H, CH2). 13C NMR (CDCl3), δ (ppm): 173.5, 147.0, 134.1,
132.7, 129.5, 129.2, 125.5, 63.2, 34.6, 34.4, 29.8, 29.7, 29.6, 29.5,
29.4, 28.8, 25.3, 25.1. MS (ESI): (M þ Na)þ = 376.19 (calcd
376.47).
Results and Discussion
An
alkanethiol,
2-nitrobenzyl-11-mercaptoundecanoate
(photolabile compound), with an o-nitrobenzyl protecting group
was synthesized and used as the base for multilayered film
assembly. o-Nitrobenzyl moieties are well-known as photolabile
protecting groups that readily undergo Norrish-type II reactions
when excited with ultraviolet light29,30 (absorption measurements
of the photolabile compound in solution before and after irradia-
tion are provided as Supporting Information). An accepted
mechanism for a Norrish-type II photocleavage involves the
excited nitro group abstracting a proton from the methylene
carbon on the aromatic ring forming a radical, the radical is
resonance stabilized by a five-membered ring intermediate which
rapidly decomposes to an aldehyde and a carboxylic acid.29 The
structure and expected photoproduct of the photolabile com-
pound on a surface is shown in Figure 1 (we note that this is an
idealized representation for clarity and not a depiction of the
molecular arrangement onthe surface). Following deprotection, a
carboxylic acid terminated layer will be exposed to the surface,
X-ray Photoelectron Spectroscopy (XPS). XPS analysis
was performed by Anderson Materials Evaluation, Inc.
(Columbia, MD). Spectra were collected on a Surface Science
Instruments SX-100 X-ray photoelectron spectrometer equipped
with a monochromatic Al KR X-ray source (1487 eV), a wide-
angle input lens, a hemispherical analyzer, and a multichannel
detector. AnellipticalX-ray beammeasuring 1.2 by0.6 mmonthe
major and minor axes was used. Spectra were collected from 0 to
1100eVata stepsizeof0.5 eVusing 32scans ofthe energyrange, a
neutralizer electron beam energy of 2.4 eV, and a dwell time of 100
ms at each step. The analysis chamber was at less than 9 ꢀ 10-10
Torr during data collection. The C 1s primary component binding
energy was set to 285.00 eV (that of unsaturated hydrocarbons)
and all other binding energies were adjusted accordingly.
(29) Bochet, C. G. J. Chem. Soc., Perkin Trans. 1 2002, 125–142.
(30) Patchornik, A.; Amit, B.; Woodward, R. B. J. Am. Chem. Soc. 1970, 92,
6333–6335.
Langmuir 2010, 26(5), 3731–3738
DOI: 10.1021/la902966b 3733