ACS Medicinal Chemistry Letters
Letter
potency against DNA viruses.8,9 On the other hand, the
replacement of the hydroxyl group of HPMC derivatives with a
fluorine atom led to 3-fluoro-2-(phosphonomethoxy)propyl
(FPMP) nucleoside analogues that lacked anti-DNA virus
activity, while being moderately active inhibitors of HIV and
HBV.10−12 Similarly, the PMP series characterized by the
presence of a methyl group at the acyclic side chain, as
exemplified by tenofovir, showed potent activity against
retroviruses but were completely devoid of anti-DNA virus
activity.12
Scheme 1. Synthesis of (S)/(R)-Phosphonamidates 10a,
10b, 11a, 11b, 12a, and 12b
a
It should be noted that the majority of reported nucleoside
phosphonate analogues belong to the N-nucleoside series, i.e.,
where a heterocyclic base (purine or pyrimidine) is linked to
an acyclic chain through a nitrogen atom (Figure 1). On the
other hand, O-alkylated nucleosides, especially O-alkylated
cytosine derivatives, were not widely investigated and never
commercialized as either anticancer or antiviral agents. The
best studied class of O-alkylated acyclic phosphonate nucleo-
sides comprises substituted 4-amino-6-hydroxypyrimidine
derivatives as nucleobase moiety (Figure 2).13,14 For instance,
a
Reagents and conditions: (a) Ph3P, DIAD, THF, rt, 12 h; (b) NH3/
MeOH, 45 °C, 15 h, 48−50% over 2 steps; (c) 1 M HCl, CH3CN/
H2O 12 h, 30−31% over 2 steps; (d) TMSBr, 2,6-lutidine, CH3CN,
rt, 12 h, 65−70%; (e) L-Aspartic acid amyl diester HCl salt or L-valine
amyl ester HCl salt, PhOH, 2,2′-dithiodipyridine, PPh3, Et3N, Pyr, 60
°C, 12 h, 28−54%.
Figure 2. 4-Amino-6-hydroxypyrimidine (A) and selected examples of
6-O-alkylated acyclic nucleosides (B and C).
successfully deprotected by treatment with 1 M HCl at room
temperature to afford the desired products 7a and 7b. All
phosphonate esters underwent hydrolysis in the presence of
TMSBr to give compounds 8a, 8b, 9a, and 9b in good yields.
Phosphonic acids 8a, 8b, 9a, and 9b were then converted to
their aryloxyphosphonamidates 10a, 10b, 11a, 11b, 12a, and
12b upon reacting with either L-aspartic acid amyl diester HCl
salt or L-valine amyl ester HCl salt and phenol using 2,2′-
dithiodipyridine and triphenylphosphine as activating agents.
All compounds were isolated as diastereoisomeric mixtures
(ratios in the 1/1−1/1.5 range).
Subsequent efforts were directed toward the synthesis of
phosphonamidates 22a, 22b, 23a, and 23b, as illustrated in
Scheme 2. In this case, compounds 13a and 13b were prepared
according to the same method used for the synthesis of diethyl
alcohols (Scheme S-1, Supporting Information).23 Under
Mitsunobu conditions (Ph3P, DIAD), the condensation
reaction between 13a and 13b and either nucleobase 1 or 2
occurred smoothly to afford nucleoside phosphonates 14a, 14b
and 15a, 15b, respectively. After deprotection of either the
acetyl group or triphenylphosphine adduct, standard TMSBr-
promoted hydrolysis of the phosphonate diesters afforded
compounds 18a, 18b, 19a, and 19b in 70−75% yields. The key
aryloxyphosphonamidate intermediates 20a, 20b, 21a, and 21b
were then obtained as described above. Lewis-acid assisted
removal of the benzyl moiety using boron trichloride and
sequential treatment with triethylamine in DCM led to a
concomitant cyclization, affording the desired cyclic L-valine
amyl ester containing (S)/(R)-phosphonamidates 22a, 22b,
23a, and 23b as diastereoisomeric mixtures (ratios in the 1/
1.1−1/1.2 range) in 25−30% yields.
5-methyl derivative B (Figure 2) showed excellent antiviral
activity against HIV and Moloney murine sarcoma virus in
vitro (EC50 = 0.00016−0.00043 μmol/mL). In addition, 5-
halogen-substituted derivatives C (Figure 2) were endowed
with pronounced antiretroviral activity with EC50 values in the
0.0023−0.0110 μmol/mL range.
Among the various available strategies for nucleotide
prodrug design,15 amidate prodrugs have been shown on
many occasions to lead to superior antiviral activities by
masking the negatively charged phosphate or phosphonate
group, which commonly limits the ability of the parent
compounds to penetrate the lipid-rich cell membrane,
consequently contributing to higher levels of active cellular
metabolites.16−19 In particular, we previously demonstrated
that the use of L-aspartic acid diamyl ester18 and L-valine amyl
ester20 moieties afforded analogues with an enhanced antiviral
efficacy.
Herein, we report the discovery of a new family of O-
alkylated acyclic nucleoside phosphonates and their amidate
prodrugs. For this specific class of molecules, various aliphatic
pseudosugar side chains (i.e., FPMP, cHPMP, and PMP) were
linked to the 2-O position of a pyrimidine base rather than the
4-O-position.
As shown in Scheme 1, N4-acetylcytosine 1 was successfully
condensed under Mitsunobu conditions (Ph3P, DIAD) with 3a
and 3b to provide compounds 4a and 4b. The initial
enantiomeric fluorinated acyclic phosphonate ester synthons
3a and 3b were synthesized according to a previously reported
method.18,21 Subsequent removal of the N4-acetyl protecting
group using methanolic ammonia furnished compounds 6a
and 6b in 48 and 50% yield, respectively. On the other hand,
the alkylation of 5-fluorocytosine 2 with 3a and 3b generated
the corresponding triphenylphosphine adducts 5a and 5b in
agreement with a previous report,22 which could be
Lastly, phosphonamidates 31a, 31b, 32a, and 32b were
easily accessible from nucleobases 1 and 2 and compounds
24a24 and 24b (Scheme S-2, Supporting Information), as
illustrated in Scheme 3. Compounds 27a, 27b, 28a, and 28b
B
ACS Med. Chem. Lett. XXXX, XXX, XXX−XXX