Pseudopteranoids from Pseudopterogorgia acerosa
Journal of Natural Products, 2008, Vol. 71, No. 12 1981
and 13C NMR (CDCl3) refer to Table 2; Mass (LRMS) obsd [M +
H]+ 655.18 m/z, MS2 fragments (CID ) 35) 637.38, 623.25 (BP),
567.33, 371.14, 353.15, 321.15, 247.15; HRESIMS calcd [M + Na]+
677.4024, obsd 677.3978.
Table 4. NMR Data for Lipidyl Pseudopterane F (6) in CDCl3
position 13C (mult.)a 1H mult (J Hz) 1H-1H COSY 1H-13C HMBC
1
2
38.0 (CH)
36.7 (CH2) 2.33 nr
1.75 nr
2.50 nrd
2a, 2b, 12a
2b, 1
2a, 1
Lipidyl pseudopterane D (4): colorless oil (4.34 mg), [R]D +120
(c 0.45, CHCl3); UV (acetonitrile) λmax (ε), 216 nm (10 616), 248 nm
(4623); IR (neat), 3510, 3082, 2930, 2859, 1765, 1721, 1649, 1615,
3
3
102.0 (C)
4
60.5 (C)
1
1579, 1439; H NMR and 13C NMR (CDCl3) refer to Table 3; Mass
5
6
54.7 (CH)
96.2 (C)
4.23 s
4, 3
(LRMS) obsd [M + H]+ 610.87 and its fragment 355.01 m/z, MS2
fragments of 355.01 (CID ) 35) 340.98, 323.09 (BP), 295.12, 246.00,
191.05; HRESIMS calcd [M + Na]+ 633.3762, obsd 633.3746.
Lipidyl pseudopterane E (5): colorless oil (4.00 mg), [R]D +110
(c 0.39, CHCl3); UV (acetonitrile) λmax (ε), 244 nm (7196); IR (neat),
3453, 3093, 2929, 2858, 1765, 1720, 1655, 1619, 1579, 1439; 1H NMR
and 13C NMR (CDCl3) refer to Table 3; Mass (LRMS) obsd [M +
H]+ 609.18 m/z, MS2 fragments (CID ) 35) 576.95, 353.13 (BP),
321.05, 275.13, 247.1, HRESIMS calcd [M + Na]+ 631.3605, obsd
631.3586.
7
8
9
10
11
12
48.2 (CH)
80.2 (CH)
150.3 (CH) 7.20 dd (1.53, 1.09) 8
132.8 (C)
69.2 (CH)
41.4 (CH2) 2.50 nr
1.70 nr
3.28 br s
5.32 dd (<1)
8(w)
9, 7(w)
19, 5, 6, 18, 17
6, 7
8, 20
5.64 d (2.6)
12a, 12b
12b, 11, 1
12a, 11
13
13
14
148.7 (C)
111.0 (CH2) 4.79 s
4.70 s
18.9 (CH3) 1.67 s
164.5 (C)
141.0 (C)
115.7 (CH2) 5.34 s
5.04 s
24.5(CH3)
170.4(C)
14b, 15
14a, 15
14a, 14b
15, 1
15, 1
1, 14, 13
Lipidyl pseudopterane F (6): colorless oil (3.99 mg), [R]D +60 (c
15
16
17
18
0.46, CHCl3); UV (acetonitrile) λmax (ε), 216 nm (11783); IR (neat),
1
3509, 3082, 2929, 2858, 1765, 1720, 1651, 1439; H NMR and 13C
NMR (CDCl3) refer to Table 4; Mass (LRMS) obsd [M + H]+ 643.08
m/z, MS2 fragments (CID ) 35) 625.26, 611.31, 405.06, 387.03(BP),
337.09, 259.15; HRESIMS calcd [M + Na]+ 665.3660, obsd 665.3651.
Base Hydrolysis of Fraction Enriched with 1. Three milliliters of
0.5 M methanolic NaOH was added to the fraction enriched with 1
(100 µg), and the mixture was heated over a steam bath for 3 min. A
solution of 5 mL of BF3-methanol (14% solution) was then added to
the mixture, which was boiled for another 3 min. The sample mixture
was cooled and transferred into a separatory funnel containing 25 mL
of hexane. A NaCl solution was added, and fatty acid methyl esters
were extracted in hexane and analyzed by GC-MS. EIMS fragmentation
patterns were compared with the NIST library database. The same
protocol was used to identify the fatty acid components of 2-6.
Synthesis of Lipidyl Pseudopterane A (1) from Pseudopterolide.
A solution of palmitic acid (420 µg, 1.6 µmol) in dichloromethane (250
µL) with a catalytic amount of triethyl amine was added to
pseudopterolide (590 µg, 1.6 µmol) in 250 µL of dichloromethane. The
reaction mixture was stirred at ambient temperature, and after 26 h,
methanol (50 µL) was added and the solvent evaporated under a stream
of nitrogen. The product mixture was reconstituted with 0.5 mL of
acetonitrile, and 20 µL was analyzed by LCMS. The production of 1
was confirmed by comparison of retention time, full MS, and MS2
spectra of [M - 18]+ (609 m/z) with an authentic standard. The
percentage yield (0.03%) was calculated by plotting a calibration curve
18b, 19
18a, 19
18a, 18b
19, 7
19, 7
7, 17, 18
19
20
21
1.85 s
53.2 (CH3) 3.87 s
16
FA 1′b 173.8 (C)
2′
33.8 (CH2) 2.33 nr
3′
3′
1′
1′
2.33 nr
24.9 (CH2) 1.60 nr
31.9 (CH2) 1.26 br m
22.9 (CH2) 1.26 br m
14.1 (CH3) 0.89 t (6.7)
3′
2’a, 2’b, FAC
14′c
15′c
16′
FAC
14′, 15′
a Multiplicities were obtained from DEPTQ experiment. b Signals for
the fatty acid chain other than mentioned in Table 3: 1H NMR δ 1.26
(H-4′-H-13′); 13C NMR δ 29.1-29.7 (C-4′-C-13′). c Signals were
assigned on the basis of the HMBC spectrum. Fatty acid chain
represented as FAC. d Not resolved.
Further studies in cells and animals will thus be required for
clarifying their true potential as PTP1B inhibitors.
Experimental Section
Collection and Extraction Procedure. The coral specimens were
collected from Sweetings Cay, Bahamas, in May 2005, and a voucher
(#090607-02-009) is maintained at UPEI. Sun-dried coral (367 g) was
blended with ethyl acetate and dichloromethane, and blending continued
with fresh solvents until the color of the solvent became faint yellow
(8 × 1 L) and then it was filtered. Evaporation of solvent in vacuo
resulted in 27.6 g of crude extract. Separation was carried out by silica
(170 g) flash column chromatography using a stepwise gradient (hexane
to ethyl acetate). Lipidyl pseudopteranoids 1-3 were isolated from the
50% hexane extract, while 4-6 were isolated from the 60% hexane
extract. These fractions were then subjected to silica column chroma-
tography using an isocratic solvent system optimized by thin-layer
chromatography (TLC) experiments. The aliquots were collected and
combined on the basis of the TLC of each aliquot, which resulted in
seven different fractions. Compounds 1-3 were isolated by semi-
preparative HPLC (CH3CN-H2O gradient with a phenyl hexyl column)
from fraction number 2 of the 50% hexane extract, and 4-6 were
obtained from fraction numbers 3 and 4 of the 60% hexane extract.
Lipidyl pseudopterane A (1): colorless oil (8.48 mg), [R]D +150
(c 0.27, CHCl3); UV (acetonitrile) λmax (ε), 218 nm (13 743), 254 nm
generated from an authentic standard (range ) 0.1-10 ppm, R2
0.9992).
)
PTP Assays. Assay buffer at pH 7.0 was prepared using HEPES
(50 mM), DTT (3 mM final), and BSA (0.1 mg/mL). Assays were
conducted at 25 °C in 96-well plates (Falcon) in a volume of 100 uL.
Reaction rates were determined using a Varioskan plate reader (Thermo
Electron). Using pNPP as a substrate, absorbance was monitored at
405 nm and measured every 30 s over 10 min, and the reaction rates
were calculated by linear regression. Enzymes used were the catalytic
domains of GST-tagged protein tyrosine phosphatases: GST-PTP1B,
GST-LAR, GST-SHP-1, and GST-MKPX. PP1 was purchased at New
England Biolabs. All inhibitor assays contained 1% DMSO (final). IC50
assays were conducted at substrate concentrations equal to the Km value
for PTP1B. IC50 values were derived by fitting data to a sigmoidal
dose-response (variable slope) curve (Prism software).
Acknowledgment. Funding was provided by NSERC (R.G.K.), the
Canada Research Chair Program (R.G.K.), the University of Prince
Edward Island (R.G.K.), the Canada Foundation for Innovation
(R.G.K.), the Atlantic Innovation Fund (R.G.K.), CIHR (M.L.T.), and
the Jeanne and Jean-Louis Le´vesque Foundation (M.L.T., R.G.K.). We
acknowledge A. Thompson and A. Ali, Dalhousie University, Halifax,
for assistance with measurements of optical rotation and CD. We thank
D. Lund (UPEI) and the Atlantic Region Magnetic Resonance Centre
for NMR support. HRESIMS data were obtained by the Maritime Mass
Spectrometry Laboratories at Dalhousie University, Halifax.
1
(4949); IR (neat) 3529, 3087, 2929, 2858, 1765, 1737 and 1720; H
NMR and 13C NMR (CDCl3) refer to Table 1; Mass (LRMS) obsd [M
+ H]+ 627.17 m/z, MS2 fragments (CID ) 35) 609.3, 595.31 (BP),
371.1, 353.15, 321.16, 247.12; HRESIMS calcd [M + Na]+ 649.3716,
obsd 649.3715.
Lipidyl pseudopterane B (2): colorless oil (2.98 mg), [R]D +120
(c 0.19, CHCl3); UV (acetonitrile) λmax (ε), 214 nm (18 325); 1H NMR
and 13C NMR (CDCl3) refer to Table 2; Mass (LRMS) obsd [M +
H]+ 652.94 m/z, MS2 fragments (CID ) 35) 635.28, 621.41 (BP),
603.41, 442.35, 353.22, 321.19, 247.14; HRESIMS calcd [M + Na]+
675.3867, obsd 675.3854.
Supporting Information Available: Copies of the HRMS, MS, 1H
Lipidyl pseudopterane C (3): colorless oil (2.45 mg), [R]D +130
1
(c 0.19, CHCl3); UV (acetonitrile) λmax (ε), 214 nm (7714); H NMR
NMR (500 and 300 MHz), 13C NMR (125 and 75 MHz), DEPTQ,