Organometallics
Article
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530.1147 [M − PF6]+ (mcalc = 530.1144). H NMR (400.13 MHz,
DMSO-d6): δ (ppm) 9.33 (d, 3J = 6 Hz, 1H, H-13), 8.48 (d, 3J = 2 Hz,
H-5), 8.29 (td, 3J = 8 Hz, 4J = 2 Hz, 1H, H-15), 8.22 (d, 3J = 8 Hz, 1H,
H-14), 7.84 (d, 3J = 3 Hz, 1H, H-1), 7.56 (td, 3J = 7 Hz, 4J = 2 Hz, 1H,
(ESI+): m/z 570.1267 [M − PF6]+ (mcalc = 570.1245). 1H NMR
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(400.13 MHz, DMSO-d6): δ (ppm) 9.25 (d, J = 6 Hz, 1H, H-13),
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4
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8.13 (td, J = 8 Hz, J = 2 Hz, 1H, H-15), 8.08 (d, J = 8.4 Hz, 1H,
H-6), 7.96 (dd, 3J = 8 Hz, 4J = 2 Hz, 1H, H- 16), 7.61 (td, 3J = 7 Hz, 4J
= 2 Hz, 1H, H-14), 7.44−7.42 (m, 8H, H-19, H-21, H-23, H-20, H-22,
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H-14), 6.28 (d, J = 7 Hz, 1H, H-25a/b), 6.21 (d, J = 6.4 Hz, 1H,
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3
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H-7, H-8, H-9), 6.27 (d, J = 17 Hz, 1H, H-10a/b), 5.96 (dd, J =
6 Hz, J = 2 Hz, 1H, H-26a/b), 5.93 (s, 2H, H-17), 5.82 (dd, J =
H-26a/b), 6.04 (d, J = 7 Hz, 1H, H-25a/b), 5.75 (d, J = 6 Hz, 1H,
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H-26a/b), 5.33 (d, 2J = 17 Hz, 1H, H-17a/b), 5.15 (d, 2J = 18 Hz, 1H,
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4
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6 Hz, J = 2 Hz, 1H, H-25a/b), 5.77 (dd, J = 6 Hz, J = 2 Hz, 1H,
H-17a/b), 2.68 (sept, J = 7 Hz, 1H, H-28), 2.11 (s, 3H, H-30), 1.55
H-25a/b), 5.67 (dd, 3J = 7 Hz, 4J = 2 Hz, 1H, H-26a/b), 5.08 (d, 2J =
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(s, 9H, H-20a/b/c), 0.86 (d, J = 3 Hz, 3H, H-29a/b), 0.84 (d, J =
3 Hz, 3H, H-29a/b). 13C{1H} NMR (100.57 MHz, DMSO-d6):
δ (ppm) 185.6 (C-18), 167.2 (C-3), 155.7 (C-13), 150.8 (C-11),
141.8 (C-15), 126.2 (C-1), 123.1 (C-14), 117.0 (C-5), 115.9 (C-24),
114.7 (C-27), 112.6 (C-16), 90.8 (C-25a/b), 90.6 (C-26a/b), 86.3
(C-26a/b), 83.1 (C-19), 81.8 (C-25a/b), 52.4 (C-17), 30.5 (C-28),
27.7 (C-20a/b/c), 27.6 (C-22a/b), 21.9 (C-29a/b), 18.5 (C-30).
[Chlorido(1-benzyl-3-{pyridin-2-ylmethyl}imidazol-2-ylidene)(η6-
p-cymene)ruthenium(II)] Hexafluorophosphate (9a).
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16 Hz, 1H, H-10a/b), 2.73 (sept, J = 7 Hz, 1H, H-27), 2.02 (s, 3H,
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H-30), 1.13 (d, J = 7 Hz, 3H, H-29a/b), 1.05 (d, J = 7 Hz, 3H,
H-29a/b). 13C{1H} NMR (100.57 MHz, DMSO-d6): δ (ppm) 190.7
(C-11), 156.5 (C-13), 151.7 (C-3), 139.9 (C-15), 136.4 (C-18), 134.2
(C-5), 133.8 (C-1), 128.7 (C- 19/23), 127.8 (C-21), 126.5 (C-20/22),
125.1 (C-7), 124.7 (C-8/14),123.5 (C-8/14), 111.7 (C-6), 111.1
(C-27), 110.6 (C-9), 101.45 (C-24), 88.8 (C-25a/b), 87.8 (C-26a/b),
85.8 (C-25a/b), 85.2 (C-26a/b), 51.4 (C-10a/b), 49.7 (C-17), 30.7
(C-28), 22.7 (C-30), 21.1 (C-29a/b), 17.9 (C-29a/b).
Stability Studies. For the stability studies in DMSO, 1a−3a, 5a, 6a,
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8a, and 10a (1−2 mg) were dissolved in in DMSO-d6 and H NMR
spectra were recorded after 0, 1, 3, 12, 24, 48, and 72 h. To determine
their stability in aqueous solution, 2a and 8a (1−2 mg) were dissolved
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in DMSO-d6 and diluted with D2O (1/5) and H NMR spectra were
collected over 3 days. The same experiment was conducted but with
1 equiv of AgNO3 added to induce the exchange of the chlorido with
an aqua ligand.
DFT Calculations. GAUSSIAN 09W57 was used to calculate the opti-
mized ground-state structures and frequencies for the different molecules
by density functional theory (DFT) with the B3LYP hybrid exchange
functional and a split basis set for C, H, N, O, and Cl (6-31G(d,p))
and the transition metal ruthenium (SDDAll) under vacuum. The
SCRF (self-consistent reaction field) keyword was implemented for
the optimization of aqueous simulation of the molecules. This method
is the integral equation formalism variant of the polarizable continuum
model (IEFPCM).58 The frontier orbitals were viewed and obtained
through the Avogadro software (version 1.2.0).59
The synthesis of 9a was performed according to the general procedure
using 9 (150 mg, 0.46 mmol), silver hexafluorophosphate (150 mg,
0.60 mmol), silver oxide (75 mg, 0.33 mmol), and [RuCl2(η6-p-cymene)]2
(194 mg, 0.32 mmol) in dry dichloromethane and 1,2-dichloroethane
to afford an orange powder (70 mg, 46%). Anal. Calcd for
C26H29ClF6N3PRu·0.2CH3(CH2)4CH3: C, 47.88; H, 4.70; N, 6.16.
Found: C, 47.57; H, 4.34; N, 5.85. HRMS (ESI+): m/z 520.1075
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[M − PF6]+ (mcalc = 520.1092). H NMR (400.13 MHz, DMSO-d6):
δ (ppm) 9.22 (d, 3J = 6 Hz, 1H, H-13), 8.08 (td, 3J = 8 Hz, 4J = 2 Hz,
1H, H-15), 7.71 (d, 3J = 8 Hz, 1H, H-16), 7.66 (d, 3J = 8 Hz, 1H, H-1)
Biomolecule Interactions. The biomolecule interactions of 1a
and 7a were studied by 1H NMR spectroscopy. Complexes 1a and 7a
were dissolved in DMSO-d6 and diluted with D2O to obtain a 20%
DMSO-d6/80% D2O solution. Equimolar amounts of the amino acids
Met, Cys, and His were added to each complex, and 1H NMR spectra
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7.56 (t, J = 7 Hz, 1H, H-5), 7.34−7.45 (m, 5H, H-19, H-23, H-21,
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H-22, H-20), 7.24 (d, J = 8 Hz, 1H, H-1), 5.87 (d, J = 6 Hz, 1H,
H-26a/b), 5.82, (dd, 3J = 17 Hz, 4J = 6 Hz, 1H, H-25a/b), 5.66 (d, 3J =
16 Hz, 1H, H-10a/b), 5.56−5.63 (m, 2H, H-23, H26a/b), 5.44 (d, 3J =
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were collected over periods of up to 24 h. The H NMR spectra for
15 Hz, 2H, H-17a/b), 4.98 (d, J = 16 Hz, 1H, H-10a/b), 2.69−2.77
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the reactions of each complex and 9-ethylguanine at equimolar and 1:2
ratios were recorded 3 and 24 h after mixing.
(m, 1H, H-28), 2.06 (s, 3H, C30), 1.10 (d, J = 7 Hz, 6H, H-29a,
H-29b). 13C{1H} NMR (100.57 MHz, acetone-d6): δ (ppm) 176.2
(C-11), 159.9 (C-13), 157.5 (C-3), 140.6 (C-15), 137.7 (C-18), 129.7
(C- 23/19), 129.4 (C-22/20), 129.1 (C-21), 125.9 (C-1), 125.6 (C-5),
123.9 (C-16), 123.6 (C-14), 112.4 (C-27), 103.3 (C-24), 90.1 (C-25a/b),
87.2 (C-26a/b), 85.7 (C-25a/b), 85.6 (C-26a/b), 55.0 (C-710a/b), 54.5
(C-17), 32.3 (C-28), 24.0 (C-30), 21.4 (C-29a/b), 18.7 (C-29a/b).
[Chlorido(1-benzyl-3-{pyridin-2-ylmethyl}benzimidazol-2-
ylidene)(η6-p-cymene)ruthenium(II)] Hexafluorophosphate (10a).
Sulforhodamine B Cytotoxicity Assay. HCT116, SW480, and
NCI-H460 cells were supplied by ATCC, while SiHa cells were obtained
from Dr. David Cowan, Ontario Cancer Institute, Canada. The cells
were grown in αMEM (Life Technologies) supplemented with 5%
fetal calf serum (Moregate Biotech) at 37 °C in a humidified incubator
with 5% CO2.
The cells were seeded at 750 (HCT116, NCI-H460), 4000 (SiHa),
or 5000 (SW480) cells/well in 96-well plates and left to settle for 24 h.
The compounds were added to the plates in a series of 3-fold dilutions,
containing a maximum of 0.5% DMSO at the highest concentration.
The assay was terminated after 72 h by addition of 10% trichloroacetic
acid (Merck Millipore) at 4 °C for 1 h. The cells were stained with
0.4% sulforhodamine B (Sigma-Aldrich) in 1% acetic acid for 30 min
in the dark at room temperature and then washed with 1% acetic acid
to remove unbound dye. The stain was dissolved in unbuffered Tris
base (10 mM; Serva) for 30 min on a plate shaker in the dark and
quantified on a BioTek EL808 microplate reader at an absorbance
wavelength of 490 nm with 450 nm as the reference wavelength to
determine the percentage of cell growth inhibition by determining the
absorbance of each sample relative to a negative (no inhibitor) and a
no-growth control (day 0). The IC50 values were calculated with SigmaPlot
12.5 using a three-parameter logistic sigmoidal dose−response curve
between the calculated growth inhibition and the compound concen-
tration. The presented IC50 values are the mean of at least 3 inde-
pendent experiments, where 10 concentrations were tested in dupli-
cate for each compound.
The synthesis of 10a was performed according to the general proce-
dure using 10 (150 mg, 0.40 mmol), silver hexafluorophosphate (130 mg,
0.51 mmol), silver oxide (90 mg, 1.96 mol equiv, 0.39 mmol), and
[RuCl2(η6-p-cymene)]2 (180 mg, 0.30 mmol) in dry dichloromethane
and 1,2-dichloroethane to afford an orange powder (75 mg, 42%).
Single crystals suitable for X-ray diffraction analysis were grown from
acetone/diethyl ether. Anal. Calcd for C30H31ClF6N3PRu·0.3H2O: C,
50.01; H, 4.42; N, 5.83. Found: C, 50.28; H, 4.79; N, 5.72. HRMS
H
Organometallics XXXX, XXX, XXX−XXX