Journal of Natural Products
Article
1595, 1526, 1484, 1376, 1256, 1192, 1136, 1018, 979, 933, 880, 800,
695 cm−1; 1H and 13C NMR data, Table 1; HRESIMS m/z 500.2197
[M + H]+ (calcd for C28H3535ClNO5, 500.2204), m/z 502.2182 [M +
H]+ (calcd for for C28H3537ClNO5, 502.2188).
5.33 (1H, qd, J = 6.3, 8.9 Hz, H-5′), 5.28 (1H, t, J = 6.7 Hz, H-2″),
5.07 (1H, m, H-6″), 4.47 (2H, m, H-1″), 3.90 (1H, m, H-4′), 3.31
(3H, s, OMe of MTPA), 2.30 (1H, m, H-11), 2.17 (2H, m, H-5″),
2.16 (2H, m, H-4″), 1.84 (3H, s, H-10″), 1.70 (3H, s, H-15), 1.67
(3H, s, H-8″), 1.60 (3H, s, H-9″), 1.48 (2H, m, H-12), 1.34 (3H, d, J
= 6.3 Hz, H-6′), 1.19 (3H, d, J = 6.9 Hz, H-7′), 1.13 (3H, d, J = 6.7
Hz, H-14), 0.94 (3H, t, J = 7.4 Hz, H-13); HRESIMS m/z 784.3236
[M + H]+ (calcd for C43H5035ClF3NO7, 784.3228), m/z 786.3229 [M
+ H]+ (calcd for C43H5037ClF3NO7, 786.3225).
N-(3,7-Dimethyl-2,6-octadienyl)-2-aza-2-deoxychaetoviridin E
(5): orange, amorphous powder (CHCl3); [α]2D5 +924 (c 0.025,
CHCl3); UV (MeOH) λmax (log ε) 292 (4.27), 385 (3.71) nm; ECD
(c 0.33 mg/mL, MeOH) λmax (Δε) 387.5 (−11.1), 305 (13.9), 269.5
(−1.0), 221 (−9.0) nm; IR (KBr) νmax 2963, 2926, 2874, 1760, 1638,
1597, 1529, 1486, 1461, 1376, 1250, 1189, 1140, 1017, 982, 934, 879,
1
(R)-MTPA ester of 1 (1b): H NMR (chloroform-d, 850 MHz) δH
1
704, 667 cm−1; H and 13C NMR data, Table 2; HRESIMS m/z
8.89 (1H, s, H-1), 7.34 (5H, m, phenyl protons), 6.89 (1H, s, H-4),
6.39 (1H, dd, J = 15.4, 7.8 Hz, H-10), 6.22 (1H, d, J = 15.5 Hz, H-9),
5.34 (1H, qd, J = 6.3, 9.4 Hz, H-5′), 5.29 (1H, t, J = 6.7 Hz, H-2″),
5.08 (1H, m, H-6″), 4.47 (2H, m, H-1″), 3.89 (1H, qd, J = 6.8, 9.3
Hz, H-4′), 3.07 (3H, s, OMe of MTPA), 2.29 (1H, m, H-11), 2.17
(2H, m, H-5″), 2.17 (2H, m, H-4″), 1.84 (3H, s, H-10″), 1.72 (3H, s,
H-15), 1.67 (3H, s, H-8″), 1.61 (3H, s, H-9″), 1.47 (2H, m, H-12),
1.25 (3H, d, J = 6.3 Hz, H-6′), 1.23 (3H, d, J = 6.8 Hz, H-7′), 1.12
(3H, d, J = 6.7 Hz, H-14), 0.93 (3H, t, J = 7.4 Hz, H-13); HRESIMS
m/z 784.3223 [M + H]+ (calcd for C43H5035ClF3NO7, 784.3228), m/
z 786.3216 [M + H]+ (calcd for C43H5037ClF3NO7, 786.3225).
550.2711 [M + H]+ (calcd for C33H4135ClNO4, 550.2724), m/z
552.2695 [M + H]+ (calcd for for C33H4137ClNO4, 552.2712).
N-(3-Methyl-2-butenyl)-2-aza-2-deoxychaetoviridin E (6): or-
ange, amorphous powder (CHCl3); [α]2D5 +14 (c 0.02, CHCl3); UV
(MeOH) λmax (log ε) 298 (4.03), 390 (3.75) nm; ECD (c 0.50 mg/
mL, MeOH) λmax (Δε) 381.5 (−7.7), 304 (9.8), 272.5 (−0.7), 221.5
(−7.7) nm; IR (KBr) νmax 2961, 2926, 2855, 1759, 1639, 1597, 1527,
1485, 1461, 1377, 1253, 1190, 1177, 1139, 1109, 1018, 980, 934, 879,
1
705, 663 cm−1; H and 13C NMR data, Table 2; HRESIMS m/z
482.2102 [M + H]+ (calcd for C28H3335ClNO4, 482.2098), m/z
484.2086 [M + H]+ (calcd for for C28H3337ClNO4, 484.2082).
4′,5′-dinor-5′-Deoxy-N-(3,7-dimethyl-2,6-octadienyl)-2-aza-2-
deoxychaetoviridin A (7): dark red, amorphous powder (CHCl3);
[α]2D5 +947 (c 0.023, CHCl3); UV (MeOH) λmax (log ε): 294 (4.18),
379 (3.69) nm; ECD (c 0.33 mg/mL, MeOH) λmax (Δε) 379.5
(−24.4), 309 (33.0), 269 (−5.0), 229.5 (−21.1) nm; IR (KBr) νmax
2963, 2928, 2875, 1756, 1686, 1602, 1487, 1460, 1377, 1246, 1192,
1124, 1033, 978, 927, 880, 690 cm−1; 1H and 13C NMR data, Table 2;
HRESIMS m/z 524.2597 [M + H]+ (calcd for C31H3935ClNO4,
524.2856), m/z 526.2584 [M + H]+ (calcd for for C31H3937ClNO4,
526.2554).
1
(S)-MTPA ester of 2 (2a): H NMR (chloroform-d, 850 MHz) δH
8.61 (1H, s, H-1), 7.42 (5H, m, phenyl protons), 6.90 (1H, s, H-4),
6.40 (1H, dd, J = 15.5, 7.8 Hz, H-10), 6.21 (1H, d, J = 15.4 Hz, H-9),
5.58 (1H, m, H-5′), 5.27 (1H, t, J = 6.7 Hz, H-2″), 5.06 (1H, m, H-
6″), 4.46 (2H, m, H-1″), 3.93 (1H, qd, J = 7.1, 5.3 Hz, H-4′), 3.53
(3H, s, OMe of MTPA), 2.28 (1H, m, H-11), 2.14 (2H, m, H-5″),
2.14 (2H, m, H-4″), 1.80 (3H, s, H-10″), 1.74 (3H, s, H-15), 1.67
(3H, s, H-8″), 1.60 (3H, s, H-9″), 1.47 (2H, m, H-12), 1.43 (3H, d, J
= 6.4 Hz, H-6′), 1.11 (3H, d, J = 6.7 Hz, H-14), 0.93 (3H, t, J = 7.1
Hz, H-7′), 0.92 (3H, d, J = 7.1 Hz, H-13); HRESIMS m/z 784.3237
[M + H]+ (calcd for C43H5035ClF3NO7, 784.3228), m/z 786.3231 [M
+ H]+ (calcd for C43H5037ClF3NO7, 786.3225).
4′,5′-dinor-5′-Deoxy-N-(3-methyl-2-butenyl)-2-aza-2-deoxy-
chaetoviridin A (8): dark red, amorphous powder (CHCl3); [α]D25
+66 (c 0.02, CHCl3); UV (MeOH) λmax (log ε) 299 (4.18), 385
(3.81) nm; ECD (c 0.50 mg/mL, MeOH) λmax (Δε) 380.5 (−20.5),
308.5 (28.9), 269 (−4.5), 229.5 (−19.4) nm; IR (KBr) νmax 2966,
2930, 2874, 1756, 1683, 1601, 1486, 1458, 1376, 1247, 1194, 1124,
1031, 978, 926, 868, 753, 690 cm−1; 1H and 13C NMR data, Table 2;
HRESIMS m/z 456.1935 [M + H]+ (calcd for C26H3135ClNO4,
456.1942), m/z 458.1913 [M + H]+ (calcd for for C26H3137ClNO4,
458.1924).
X-ray Crystallography for Chaetoviridin A (9). Crystal data for
C23H25ClO6 (M = 432.88 g/mol): monoclinic, space group P21 (no.
4), a = 12.1671(8) Å, b = 5.4176(4) Å, c = 16.7266(11) Å, β =
107.932(4)°, V = 1049.00(13) Å3, Z = 2, T = 100.0 K, μ(Cu Kα) =
1.935 mm−1, Dcalc = 1.370 g/cm3, 6402 reflections measured (5.554°
≤ 2θ ≤ 130.064°), 3380 unique (Rint = 0.0692, Rsigma = 0.0864),
which were used in all calculations. The final R1 was 0.0620 (I >
2σ(I)) and wR2 was 0.1701 (all data). The goodness of fit on F2 was
1.094. Flack parameter = 0.076(19).
1
(R)-MTPA ester of 2 (2b): H NMR (chloroform-d, 850 MHz) δH
8.55 (1H, s), 7.45 (5H, m, phenyl protons), 6.90 (1H, s, H-4), 6.40
(1H, dd, J = 15.5, 7.8 Hz, H-10), 6.19 (1H, d, J = 15.4 Hz, H-9), 5.62
(1H, qd, J = 6.3, 4.4 Hz, H-5′), 5.21 (1H, t, J = 6.6 Hz, H-2″), 5.05
(1H, tq, J = 5.3, 1.5 Hz, H-6″), 4.38 (2H, m, H-1″), 3.98 (1H, qd, J =
7.1, 4.4 Hz, H-4′), 3.52 (3H, s, OMe of MTPA), 2.28 (1H, m, H-11),
2.14 (2H, m, H-5″), 2.11 (2H, t, J = 5.0 Hz, H-4″), 1.77 (3H, s, H-
10″), 1.73 (3H, s, H-15), 1.67 (3H, s, H-8″), 1.59 (3H, s, H-9″), 1.47
(2H, m, H-12), 1.37 (3H, d, J = 6.3 Hz, H-6′), 1.11 (3H, d, J = 6.8
Hz, H-14), 1.08 (3H, d, J = 7.1 Hz, H-7′), 0.93 (3H, t, J = 7.4 Hz, H-
13); HRESIMS m/z 784.3237 [M
+
H]+ (calcd for
C43H5035ClF3NO7, 784.3228), m/z 786.3224 [M + H]+ (calcd for
C43H5037ClF3NO7, 786.3225).
Chromium Trioxide Oxidation of Compound 1. Oxidation of
compound 1 (21.0 mg) was carried out using a reagent prepared from
CrO3 (30.0 mg), HOAC (900 μL), H2SO4 (25 μL), and H2O (25
μL). After being stirred for 20 h at rt, the reaction mixture was
extracted with EtOAc three times. The combined organic layer was
washed with H2O, evaporated, and applied to preparative HPLC
(30% MeCN in H2O, 10 mL/min, 205 nm) to afford the compound
(S)-2-methylbutyric acid (1.0 mg, tR 13.9 min) (Figure S113), which
was identified by comparison of the NMR data (Figures S93 and S94)
and specific rotation value (Figure S95) to those reported in the
literature.5
The crystallographic data for 9 have been deposited at the
Cambridge Crystallographic Data Centre with the deposition number
of CCDC 1918313. Copies of the data can be obtained, free of
charge, on application to the Director, Crystallographic Data Center
(CCDC), 12 Union Road, Cambridge CB2 1EZ, UK (fax: + 44-0-
Quantum Chemical Calculations. The conformational search
was carried out using the conformer rotamer ensemble sampling tool
(crest).20 All theoretical calculations were carried out using the
Gaussian 09 program package.21 More details about the computa-
tional method, the optimized conformation geometries, thermody-
namic parameters, population of all conformations, and the DP4+
probability analysis are provided in the Supporting Information.
Cell Lines and Culture. Human gastric cancer MGC803 and
AGS cell lines were purchased from the Cell Bank of the Chinese
Academy of Science. Both cell lines were cultured in RPMI 1640
media (Hyclone) supplemented with 10% fetal bovine serum and 1%
penicillin/streptomycin from Northend Biotechnology and kept in an
incubator with 5% CO2 at 37 °C.
Preparation of (S)- and (R)-MTPA Ester Derivatives of 1 and
2. The Mosher’s esters were prepared based on the standard
procedure.16 Compound 1 (2.1 mg) was dissolved in 500 μL of
anhydrous CHCl3. Then dry pyridine (1.2 mg) and (R)-MTPA-Cl
(1.9 mg) were added to the solution. The reaction was stirred at rt for
2 h. The target product was purified by preparative HPLC (85%
MeOH in H2O) to get the (S)-MTPA ester 1a (0.8 mg). Identical
conditions were used to prepare the (R)-MTPA ester 1b (0.7 mg)
with (S)-MTPA-Cl. (S)-MTPA and (R)-MTPA esters of 2, 2a (0.8
mg), and 2b (0.6 mg) were prepared based on the above protocol.
1
(S)-MTPA ester of 1 (1a): H NMR (chloroform-d, 850 MHz) δH
8.88 (1H, s, H-1), 7.29 (5H, m, phenyl protons), 6.88 (1H, s, H-4),
6.39 (1H, dd, J = 15.4, 7.9 Hz, H-10), 6.21 (1H, d, J = 15.3 Hz, H-9),
H
J. Nat. Prod. XXXX, XXX, XXX−XXX