Anal. Chem. 2007, 79, 9022-9029
High-Yielding and Controlled Dissociation of
Glycosides Producing B- and C-Ion Species under
Collision-Induced Dissociation MS/MS Conditions
and Use in Structural Determination
Katsuhiko Suzuki,† Shusaku Daikoku,† Takuro Ako,† Yuki Shioiri,‡ Ayako Kurimoto,† Atsuko Ohtake,†
Sujit K. Sarkar,† and Osamu Kanie*,†,‡
Mitsubishi Kagaku Institute of Life Sciences (MITILS), 11 Minamiooya, Machida-shi, Tokyo 194-8511 Japan, and
Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, 4259 Nagatsuta-cho,
Midori-ku, Yokohama 226-8501 Japan
thus has potential to form an enormous number of structures.1
Despite the difficulties encountered in structural determination,
it has been reported that glycosylation as a posttranslational
modification (PTM) of protein affects the secretion of glycopro-
tein.2,3 The involvement of PTM in cellular polarity has also been
reported.4,5 It is widely recognized that changes in the composition
of glycosphingolipids are associated with development and dif-
ferentiation.6 Considering the need to analyze minute amounts of
glycoconjugates obtained from biological samples as well as the
existence of glycoforms, it is believed that the use of mass
spectrometry-based analytical methods in the analysis of glyco-
conjugates is a logical consequence.7-9 Structural analysis based
on collision-induced dissociation (CID) is a very powerful tech-
nique in this regard.10,11 It is known that there are spectral
differences among isomeric compounds. In most cases, there are
some differences in signal intensities, while in other cases,
different fragment ions can be found. These phenomena are now
used in a more systematic manner to identify oligosaccharides
by spectral matching.11-17 In structural elucidation, descriptive ion
Collision-induced dissociation (CID) in mass spectrom-
etry is a powerful technique with which to understand gas-
phase chemical reactions. A mass spectrometer is used
to carry out the reaction, isolation, and analysis. On the
other hand, structural analysis of glycan structures is of
extreme importance in the analysis of biomolecules, such
as glycoproteins and glycolipids. In the analysis of glycan
structures based on CID, certain ion species, including
B-/Y-, C-/Z-, and A-/X-ions, are produced. Among these
ions, we are interested in C-ion species that carry a
glycosyl oxygen atom at the anomeric center and that
possibly provide information regarding anomeric config-
uration. A method for generating C-ion species when
necessary is thus considered to be important; however,
none is currently available. In this study, synthetic gly-
cosides carrying a series of aglycons were analyzed with
the aim of identifying suitable glycosides with which to
produce C-ions to be used in the structural determination
of oligosaccharides. The results showed a 4-aminobutyl
group was an excellent candidate. Furthermore, the use
of C-ion species obtained in this manner in the structural
characterization of a ganglioside, GM3, is described. The
type of glycoside is believed to be valuable not only in
structural analysis but also in biological investigation,
because of the existing amino functionality that has been
proven to be useful by enabling the generation of conju-
gates with other molecules and materials.
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Proia, R. L. Proc. Natl. Acad. Sci. U.S.A. 1999, 96, 914209147.
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Spectrometry; McCloskey, J. A., Ed.; Methods in Enzymology 193; Academic
Press: San Diego, CA, 1990; pp 237-263.
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Kobayashi, K.; Nakagawa, H.; Monde, K.; Nishimura, S.-I. Anal. Chem.
2004, 76, 7294-7303.
The structural characteristics of oligosaccharides are quite
different from other biopolymers such as nucleic acids and
peptides. Diversity is generated from sequential combination in
the latter two types of polymers, whereas anomers, linkage
position, branching, and sequence are factors in oligosaccharide
structure. Furthermore, the molecular diversity of oligosaccha-
rides is described using the term glycoform. This class of molecule
(14) Kameyama, A.; Kikuchi, N.; Nakaya, S.; Ito, H.; Sato, T.; Shikanai, T.;
Takahashi, Y.; Takahashi, K.; Narimatsu, H. Anal. Chem. 2005, 77, 4719-
4725.
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77, 6250-6262.
* To whom correspondence should be addressed. Fax: (+81)42-724-6317.
E-mail: kokanee@mitils.jp.
† Mitsubishi Kagaku Institute of Life Sciences (MITILS).
‡ Tokyo Institute of Technology.
9022 Analytical Chemistry, Vol. 79, No. 23, December 1, 2007
10.1021/ac701686n CCC: $37.00 © 2007 American Chemical Society
Published on Web 10/17/2007