2
Z.-Q. Sun et al. / Bioorg. Med. Chem. Lett. xxx (2016) xxx–xxx
2 3 2 3
Scheme 1. Synthesis of Thiazole acetamides derivative. Reagents and conditions: (a) Br , Reflux; (b) DCM, Et N, 0 °C – rt, 4 h; (c) ACN, K CO , Reflux 4–8 h.
Therefore, the developed thiazole acetamides analogues were rig-
orously analyzed by Molinspiration, a web based software. It was
used to predict parameter such as MiLogP, TPSA and
able to cross the cell membrane which is a key parameter for trans-
portation across and in turn is needed for the generation of bioac-
tivity. Moreover, it will be suitable for drug absorption owing to
1
4
16
druglikeness.
the acceptable TPSA value.
The MiLogP (octanol/water partition coefficient) is able to
envisage the ability of the molecule to cross the cell membrane.
This methodology is based on the sum of fragment based contribu-
tions and correction factors for the compounds analyzed. Molecu-
lar Polar Surface Area or Total Polar Surface Area (TPSA) is
calculated as a sum of fragment based contributions in which sur-
face areas correspond to polar fragments centered to N- and O- and
by hydrogen atoms attached to them are to be considered.1 It has
been deemed as a very efficient descriptor illustrating the drug
absorption (including intestinal absorption, bioavailability, Caco-
BuChE was found in elevated concentration in AD and responsi-
ble for hydrolyzing the acetyl choline, thus, inhibition of BuChE
was also considered as a fruitful target for symptomatic relief in
ADs. Consequently, the inhibitory effect of target analogues was
analyzed for both AChE and BuChE using Ellman method. Rivastig-
mine was used as standard in this comparison test. The inhibitory
potency (IC50) of tested compounds along with selectivity index
has been outlined in Table 2. According to the results, the entire
set of the synthesized compound showed considerable inhibition
of both the enzymes. It has been found that, compound 6a, bearing
no substituent showed least activity against the tested enzymes.
Whereas, on the introduction of the methyl as a substitutent (6b)
render compound much more active in regard of inhibitory
potency and SI. On changing the substitution pattern, from para
to ortho, the activity was decreased marginally. The highest inhibi-
tory potency was reported by the compound 6d having p-methoxy
against the tested enzymes along with high SI. Whereas, it’s iso-
meric counterpart, compound 6e exhibit less pronounced activity
than the parent. The activity was significantly abolished in the
presence of an electron withdrawing group. Particularly, in the
case of compound 6f and 6g, marked reduction in activity was
observed with minimal difference. On replacing the nitro with
chloro, the activity was declined more than twofold with a mild
reduction in SI. No significant difference was observed in the case
of compound 6j against both the tested enzymes with less selectiv-
ity for AChE. It is surprising to note that, none of the synthesized
compound exhibited activity similar or better than Rivastigime.
However, the structure activity relationship (SAR) suggests that,
presence of electron donating group seemed to be suitable for
5
2
permeability) and blood brain barrier permeability. This method
is based on contribution of group obtained by comparing the sum
of fragment contributions to ‘‘real” 3D volume for a training set of
about 12,000 drug-like molecules. Moreover, the semiempirical
AM1 method was used for the optimization of the 3D molecular
geometries for a training set.
The ability of a molecule to iterate for adopting the best possi-
ble conformation in binding pocket was determined by the Num-
ber of Rotatable Bonds. It has been directly related with an oral
bioavailability of drugs and defined as any single bond except
the aromatic, bonded to non-terminal non-hydrogen atom. Due
to high rotational energy barrier, amide CAN bonds are not consid-
1
6
ered. The results of the rigorous analysis of compounds 6 (a–j) in
terms of molecular properties which depicts pharmacokinetics tol-
erability on the basis of above discussed parameters has been
shown in Table 1. It was found that, the entire set of molecules
obeyed Lipinski rule of five recommendations suggesting to have
good bioavailability necessary for new chemical entities (Nviola-
tion = 0). As shown by MilogP value, these molecules were also
Table 1
Molecular properties of compounds 6 (a–j)
Compound
miLogP
TPSA
Natoms
MW
nON
nOHNH
nviolations
nrotb
Volume
6
6
6
6
6
6
6
6
6
6
a
b
c
d
e
f
g
h
i
3.65
4.10
4.05
3.70
3.66
3.61
3.56
4.33
4.28
3.81
41.99
41.99
41.99
51.22
51.22
87.81
87.81
41.99
41.99
41.99
21
22
22
23
23
24
24
22
22
22
294.38
308.41
308.41
324.40
324.40
339.38
339.38
328.82
328.82
312.37
3
3
3
4
4
6
6
3
3
3
1
1
1
1
1
1
1
1
1
1
0
0
0
0
0
0
0
0
0
0
4
4
4
5
5
5
5
4
4
4
261.60
278.17
278.17
287.15
287.15
284.94
284.94
275.14
275.14
266.54
j