W. Holzer et al.
The exceptional position of compound 10 is best reflected by
its 15N NMR spectrum: The chemical shift of −190.9 ppm for N-4
definitely rules out an ‘aromatic’ pyrazine system (Scheme 3). The
predominanceoftheNH-formisfurtherconfirmedbythedistinctly
smaller chemical shifts for H-5 (7.90 ppm) and H-6 (7.65 ppm)
compared to the corresponding shifts in all other compounds
were recorded either on a Varian UnityPlus NMR spectrometer
1
13
(300 MHz for H, 75 MHz for C) or on a Bruker Avance 500
instrument (500 MHz for 1H, 125 MHz for 13C) at 25 C from
approximately 0.5 M solutions using 5 mm direct detection
broadband probes and deuterium lock. The center of the solvent
signal was used as an internal standard which was related to
◦
1
13
(
>8.17 ppm), furthermore by the larger H5,H6 coupling (3.7 Hz
tetramethylsilane with δ 2.49 ppm ( H) and δ 39.5 ppm ( C).
2
instead of ∼2.4 Hz, see above), by the markedly smaller J(C6,H5)
of 5.5 Hz (instead of 10.2–11.7 Hz) and by an obvious NOE on
H-5 upon irradiation of the (broad) NH resonance (Scheme 3).
In contrast, the corresponding 3-amino-2-pyrazinecarboxylic acid
1
The recording conditions were the following: H NMR: pulse
angle 30 , acquisition time 5 s, digital resolution 0.2 Hz/data point,
◦
spectral width 20 ppm, 16 transients, relaxation delay 5 s; broad-
13
◦
band decoupled C-NMR spectra: pulse angle 30 , acquisition
time 2 s, digital resolution 0.5 Hz/data point, spectral width
9
, which in principle is capable of prototropic tautomerism as
well, does not show such behaviour and thus can be considered
to be existent in the amino form in DMSO-d6 solution. These
findings are in full agreement with those published for related
compounds.[
2
20 ppm, 256–2048 transients, relaxation delay 2 s, exponential
multiplication with 1.0 Hz line broadening factor before FT;
gated decoupled C-NMR spectra: as above but acquisition time
2
13
16]
.5 s, digital resolution 0.4 Hz/data point, 512–8192 transients,
An interesting phenomenon was observed with 3-chloro-2-
pyrazinecarboxylic acid 12. In this compound, obvious differences
were evident between spectra observed in DMSO-d6 and those
relaxation delay 2.5 s, resolution enhancement by Gaussian
weighting (Varian: lb = −0.15, gf = 0.7; Bruker: lb = −0.6,
gb = 0.2) before FT. Full and unambiguous assignments were
1
5
in CDCl3 solution (Fig. 2). The situation in the N NMR spectra
seemstobeespeciallystriking whereas, inDMSO-d6 δ(N-1)islarger
than δ(N-4) (−44.2 vs −51.5 ppm) – as observed in all other 2,3-
disubstituted pyrazines 5–11 and 13 – a reverse situation appears
for 12 in CDCl3, namely δ(N-1) < δ(N-4) (−51.7 vs −46.6 ppm).
Moreover, in CDCl3 a significantly smaller absolute value for
1
13
achieved by consequent application of fully H-coupled C-NMR
[
37]
spectra (gated decoupling), gs-HSQC (1024 × 256 data matrix,
0 ppm for H, 160 ppm for C, four transients accumulated
per t1 increment; optimized for J = 160 Hz, qsine multiplication
in both dimensions) and gs-HMBC
1
13
1
[
38]
(1024 × 256 data matrix,
1
13
2
10 ppm for H, 180 ppm for C, 16 transients accumulated
per t1 increment; optimized for J = 8 Hz, sine multiplication in
both dimensions) techniques to all compounds. The unequivocal
mapping of C, H coupling constants was performed via 2D
long-range INEPT (δ,J) spectra with selective excitation (DANTE)
J(N1,H6) (10.0 Hz) was determined compared to that in DMSO-d6
2
(
11.5 Hz), whereas, J(N4,H5) remained almost unaffected by the
change of the solvent (11.3 Hz in DMSO-d6, 11.2 Hz in CDCl3). A
possible explanation for the mentioned effects can be given by the
assumption that, in CDCl3 the pyrazine N-1 atom of 12 is involved
in an intramolecular hydrogen bond (Fig. 2). The so-caused stress
of the nitrogen’s lone-pair leads to a decrease in the magnitude
1
3
1
[
11]
of pyrazine-H resonances (12 Hz excitation width, optimized for
J = 8 Hz, 64 increments for 20 Hz width in F1, 128 transients
2
[15,17,18]
accumulated per t increment; zero-filling to 128 data points in
of J(N1,H6) and also to a decrease of δ(N-1).
It is well
1
the F1 dimension, shifted sine multiplication in F1). The 15N-
known from the literature that, lone-pair effects can drastically
influence a large variety of different spin coupling constants.
Additionally, the involvement of pyridine-type nitrogen atoms
in hydrogen bonding, complexation or protonation is known to
NMR spectra were obtained on a Bruker Avance 500 instrument
(50.69 MHz) equipped with a 5 mm broadband observe probe at
◦
2
5 C and were referenced against external, neat nitromethane.
1
5
1
decrease the magnitude of the corresponding geminal N, H
Chemical shifts of pyrazine nitrogen atoms were determined
employing refocused, H-decoupled INEPT spectra optimized for
an N, H coupling of 11 Hz (acquisition time 1 s, digital resolution
1 Hz/data point, spectral width 400 ppm, 512–4K transients),
nitrile N-atoms were covered by inverse gated decoupled
NMR spectra (pulse width 7 µs (50 ), relaxation delay 10 s, 8 K
transients). The N, H coupling constants were determined either
from H-coupled N-NMR spectra (30 pulse angle, 10 s relaxation
delay) of from DEPT experiments without H-decoupling [both:
acquisitiontime3s,digitalresolution0.33 Hz/datapoint,resolution
coupling constant.[
17,18]
Furthermore, it is well documented that,
1
1
5
1
the involvement of pyridine-type nitrogen atoms in hydrogen
bonding or – more drastically – in protonation causes an upfield
1
5
[19]
15
shift of the corresponding N resonance.
In DMSO-d6, which
N
◦
exhibits strong acceptor properties, intramolecular hydrogen
bonds are usually broken and such distinctive features can not
be observed. In contrast, esters 2 and 5 having no capability for
hydrogen bonding exhibit only small differences between the
concerning chemical shifts and coupling constants in DMSO-
d6 and CDCl3 solution. Investigations with regard to similar
phenomena in other pyrazinecarboxylic acids (1, 9) were not
possible owing to the very low solubility of the latter compounds
in CDCl3.
1
5
1
1
15
◦
1
enhancement by Lorentz-to-Gauss transformation (lb = −0.6,
1
15
gb = 0.2)]. For the assignment of pyrazine N-signals H, N gs-
[38]
HMBC experiments (Bruker standard program ‘inv4gplplrndqf’,
048 × 128 data matrix, 10 ppm for H, 200 ppm for 15N, 32
1
2
In conclusion, we have presented full and unambiguous
transients accumulated per t1 increment; 65 (45) ms delay for
1
13
15
assignments of H, C and N NMR chemical shifts of a variety of
-substitutedand2,3-disubstitutedpyrazinesaswellasacomplete
15
1
the evolution of the N, H long-range coupling, optimized
for J = 8 (11) Hz, zero-filling to 1K data points in the
F1 dimension, sine multiplication in both dimensions) were
undertaken.
The melting point was determined on a Reichert–Kofler hot-
stage microscope and is uncorrected. The mass spectrum was
obtained on a Shimadzu QP 1000 instrument (EI, 70 eV), the IR
spectrum on a Perkin-Elmer FTIR 1605 spectrophotometer. The
elemental analysis (C, H, N) was performed at the Microanalytical
Laboratory, University of Vienna.
2
1
1
analysis of the connected scalar spin coupling constants ( H, H;
1
3
1
15
1
C, H; N, H) employing an extensive combination of different
D and 2D NMR spectroscopic techniques.
1
Experimental
All NMR experiments were performed using standard NMR
[
36]
1
13
spectroscopic techniques.
The H NMR and C NMR spectra
www.interscience.wiley.com/journal/mrc
Copyright ꢀc 2009 John Wiley & Sons, Ltd.
Magn. Reson. Chem. 2009, 47, 617–624