S. Aoyama et al. / Journal of Photochemistry and Photobiology A: Chemistry 276 (2013) 1–7
5
with 12 h UVA irradiation (triplicate experiments). Co-injection of
P1 with dX, P2 with 8-oxodG, and P3 with dO gave respectively a
single peak having areas coincident to the sum of the peak areas
of P1 and dX, P2 and 8-oxodG, and P3 and dO, respectively (Fig. 2).
The ESI-MS spectra of P1 and P3 showed protonated molecular ion
([MH]+) m/z 269, and their major MS/MS product ion was m/z 153
that could be formed by a loss of deoxyribose (116 amu) from dX
and dO (mw = 268). The ESI-MS spectra of P2 showed [MH]+ m/z
284, and the major product ion was m/z 168 that could be formed
by a loss of deoxyribose from 8-oxodG (mw = 283). 1H NMR analysis
of P1, P2, P3, and authentic specimens of 8-oxodG and dO dissolved
in dimethylsulfoxide-d6 were performed (summarized in Suppor-
ting information), and the 1H NMR profiles of P1, P2 and P3 were
identical with those of authentic specimens of dX, 8-oxodG and
dO, respectively [13,16]. Thus, P1, P2 and P3 were identified as dX,
8-oxodG and dO, respectively.
0.5
0.4
0.3
0.2
0.1
0
2
1.5
1
0.5
0
300 320 340 360 380 400
Wavelength (nm)
Fig. 5. UV absorption spectrum of 5 mM NPRO at pH 3.7 (line) and amounts of
products (G1 by circles and G2 by triangles) formed on irradiation at individual
wavelength. Peak area values are those of the integrator reading.
We attempted to determine the structures of compounds in
peaks 4 and 5 (hereafter referred to as G1 and G2, respectively). UV
spectra of G1 and G2 seemed highest at about 260 nm (Figs. 2 and 3),
making us to suspect that G1 and G2 might be guanine derivatives.
With positive mode LC–MS/MS analysis under a constant neutral
scan that should release a fragment of 116 amu, we observed an
ion (m/z 337) from both G1 and G2. With the product ion scan from
the precursor ion (m/z 337) of G1 and G2, we found two peaks; one
major MS/MS product ion (m/z 221) that could be formed by loss of
deoxyribose (116 amu) from the protonated molecule ion ([MH]+)
(m/z 337), and one minor product ion (m/z 152) that seems to rep-
resent the protonated guanine ion formed by a loss of the pyrrolidyl
moiety (69 amu) from the product ion (m/z 221).
MRM mode by monitoring the precursor/product ion transitions
m/z 337/221 ([MH]+/[MH−116]+, the loss of deoxyribose) a signal
for detecting G1 and G2. Indeed a peak was observed at reten-
tion time 25.7 min, which corresponded to the authentic G1 and
G2 (Fig. 6B). We concluded that G1 and/or G2, probably both, were
formed in DNA by the action of UVA-NPRO.
4. Discussion
Although N-nitroso compounds are thermally stable in aqueous
solutions, Chow et al. described that nitroso-␣-amino acid includ-
formation of piperidinium radical from an acidic aqueous solution
(pH 2) of N-nitrosopiperidine on photolysis, and proposed that a
radical disproportion occurs to form HNO and tetrahydropyridine
(Scheme, Reaction 2) [18].
and (S)-8-(2-pyrrolidyl)-2ꢀ-deoxyguanosine can be formed by UVA-
irradiation of NPRO-dG and of NPRO-DNA in aqueous solutions. Our
finding that the plots of G1 and G2 formation match the absorption
curve of NPRO, both being highest at 340 nm (Fig. 5), suggests that
the rate limiting step of G1 and G2 formation is photo-cleavage
of the N N bond in NPRO. Thus, a possible mechanism of the G1
and G2 formation may involve release of NO from NPRO result-
ing in the formation of an aminium radical, and the latter reacting
with NO radical to create an aminium cation. Subsequent nucleo-
philic attack of the C8 moiety of dG by the cation would give CO2
multiple, Ha,b; 2H, m, H␥a,b), 2.01 (1H, m, H2ꢀa), 2.79 (2H, m,
H␣ and H-␦a), 2.87 (1H, ddd, H2ꢀb), 2.95 (1H, ddd, H-␦b), 3.50
(5H, m, H5ꢀa,b), 3.78 (1H, dd, H4ꢀ), 4.34 (1H, br, H3ꢀ), 5.45 (1H, s,
3ꢀ-OH), 6.29 (1H, dd, H1ꢀ) and 6.76 (2H, s, NH2) (Fig. 3). The cou-
plings were confirmed by COSY measurements (Fig. 3). The 1H NMR
spectrum of G2 showed signals at ı 1.57–1.79 (2H, m, H␥a,b), 1.96
(1H, m, Ha), 2.06 (1H, m, H2ꢀ), 2.17 (1H, m, Hb), 2.81 (1H, m,
H-␦a), 2.90 (2H, m, H2ꢀ and H-␦b), 3.26 (1H, dd, H5ꢀa), 3.34 (1H,
dd, H5ꢀb), 3.78 (1H, dd, H4ꢀ), 4.31 (1H, t, H␣), 4.37 (1H, br, H3ꢀ),
5.43 (1H, s, 3ꢀ-OH), 6.31 (1H, t, H1ꢀ) and 6.76 (2H, s, NH2) (Fig. 4).
The couplings were confirmed by COSY measurements (Fig. 4). The
proton signal of the H8 position in the dG residue at 7.90 ppm was
absent in either profiles of G1 or G2, indicating that substitution
had occurred at the C8 position of dG. The 1H NMR signal of the H␣
proton of G1 at 2.79 ppm was upfield to that of G2 at 4.31 ppm. In
the R-conformation of 8-(2-pyrrolidyl)dG, the H␣ proton must have
become close to protons of the deoxyribose moiety, thereby being
shielded by steric compression; hence the signal of the H␣ pro-
ton in the R-configuration would be shifted upfield. We concluded
that G1 must be (R)-8-(2-pyrrolidyl)-2ꢀ-deoxyguanosine, and G2
(S)-8-(2-pyrrolidyl)-2ꢀ-deoxyguanosine.
Experiments using monochromatic UVA in the range
300–400 nm were performed to determine the relation between
products-yield and wavelength. As Fig. 5 shows, the highest yields
of both G1 and G2 were found to occur at 340 nm. This wavelength
coincided with the absorption maximum of NPRO, suggesting that
sensitization of NPRO by UVA triggers the formation of both G1
and G2.
3.2. Formation of G1 and G2 in DNA-NPRO-UVA
DNA was treated with NPRO plus UVA under neutral conditions.
The DNA was then digested into nucleosides and the mixture frac-
tionated by HPLC. As the retention times of authentic G1 and G2
were 19.5 and 21.5 min, the eluent from 19 min to 22 min was col-
lected (Fig. 6A). This fraction was analyzed with LC-MSMS in the
Fig. 6. Identification of G1 and G2 in DNA treated with NPRO plus UVA. (A) HPLC
profile of nucleosides produced by enzymatic digestion of DNA that had been treated
with NPRO and UVA. (B) LC–MSMS profile of the fraction pooled from 19 to 22 min
in (A).