ACS Chemical Neuroscience
Research Article
6-(Bromomethyl)-2-(3-chlorophenyl)-3-difluoromethoxypyridine
(15). The crude [6-(3-chlorophenyl)-5-difluoromethoxy-2-pyridyl]-
methanol was dissolved in DCM (20 mL) and cooled to 0 °C. PBr3 (2
mL, 221 mmol) was slowly added, and the reaction mixture was
allowed to warm to RT overnight. The reaction mixture was then
cooled to 0 °C and treated with saturated NaHCO3 (200 mL). The
mixture was extracted 3 times with ethyl acetate, dried with Na2SO4,
and concentrated to give 15: 2.8 g (8.0 mmol, 63% over 4 steps).
2-(3-Chlorophenyl)-3-(difluoromethoxy)-6-[(1-methyl-1H-pyra-
zol-4-yl)methyl]pyridine (4; T2525). In a 25 mL round-bottom flask,
compound 15 (870 mg, 2.5 mmol) was dissolved in 1,4-dioxane/
water (4:1, 7.5 mL) and then treated with (1-methyl-1H-pyrazol-4-
yl)boronic acid (630 mg, 5.0 mmol), K3PO4 (1.06 g, 5.0 mmol), and
Pd(dppf)Cl2 (630 mg, 0.86 mmol). Argon was bubbled through the
solution for 5 min; then the flask was sealed under argon and heated
to 90 °C for 12 h. The reaction mixture was concentrated under
reduced pressure, and the residue was partitioned between ethyl
acetate and water. The layers were separated, and the organic phase
was dried with Na2SO4 and concentrated. The crude product was
purified by silica gel chromatography (100% DCM) to give 4 as an
binding site is identical to those of PDE4A−C. Synthetic genes were
engineered with carboxyl- or amino-terminal hexahistidine tags for
baculovirus-infected insect cell expression and purification. Human
PDE4D7 contained a mutation of S129D to mimic activation by
cAMP-dependent PKA, while PDE4B1 contained the mutation
S133D.37 Both PDE4 proteins contained the mutations S579A and
S581A to remove the potential for ERK-dependent phosphorylation.
Kinetic assay of cAMP hydrolysis by purified PDE4 was measured
by coupling the formation of the PDE4 reaction product, 5′-adenosine
monophosphate, to the oxidation of NADH by the use of three
coupling enzymes (yeast myokinase, pyruvate kinase, and lactate
dehydrogenase), which allowed fluorescent determination of reaction
rates.23 Final concentrations of assay components were as follows: 50
mM Tris, pH 8; 10 mM MgCl2; 50 mM KCl; 2% DMSO; 5 mM
tris(2-carboxyethyl)phosphine; 0.4 mM phosphenolpyruvate; 0.01
mM NADH; 0.04 mM ATP; 0.004 mM cAMP; 7.5 units of
myokinase from yeast; 1.6 units of pyruvate kinase; 2 units of lactate
dehydrogenase; and ∼0.5 nM PDE4D or PDE4B enzymes to yield an
initial rate of about −0.7 RFU/s. All data were normalized relative to
control wells lacking cAMP and are presented as percent inhibition.
An inhibitory concentration 50% (IC50) value was calculated by fitting
a sigmoidal dose response curve. Z′ quality factors were routinely >0.6
for the assay.
Mouse Pharmacokinetic Protocol. Mouse pharmacokinetic
experiments were carried out by AmpliaPharmaTek, Montreal,
Quebec, Canada. Adult male CD1 mice were dosed intravenously
with the test compound dissolved in 5% DMSO, 5% Solutol, and 90%
saline. Up to 3 compounds were dosed as a cassette at 0.1 mg/kg.
Plasma and brain samples were collected (0.083, 0.25, 0.5, 1, 2, 4, 8,
and 24 h) and analyzed by LC-MS/MS. Pharmacokinetic parameters
were determined using WinNonlin. Use of animals was in accordance
with the “NIH Guide for the Care and Use of Laboratory Animals”
(revised 2011) and was approved by the Institutional Animal Care
and Use Committee of the contracting research organization
(AmpliaPharmaTek, Montreal, Quebec, Canada). The mouse brain
SUV was calculated as [brain Cmax (ng/mL)/dose (mg/kg)/1000].
Radiochemistry. Radiochemistry was performed in lead-shielded
hot-cells with automated radiosynthesis apparatus for personnel
protection from radiation. γ-Radioactivity from carbon-11 was
measured with a calibrated dose calibrator (Atomlab 300, Biodex
Medical Systems, Shirley, NY) or an automatic γ-counter (Wizard 3″,
1480 instrument; PerkinElmer; Waltham, MA).
1
oil: 180 mg (0.51 mmol, 21%); H NMR (CDCl3, 400 MHz) δ 7.89
(m, 1H), 7.78 (m, 1H), 7.52 (d, J = 8.4 Hz, 1H), 7.42 (m, 3H), 7.29
(m, 2H), 6.21 (t, J = 73.2 Hz, 1H), 4.01 (s, 2H), 3.90 (s, 3H); TOF
MS ES+ m/z 350.2 [M + H]+; HRMS (ES+) Calcd for
C17H14ClF2N3O [M + 1]+ 350.0872, found 350.0873; HPLC Method
A, tR = 3.63 min.
Preparation of 3-Methoxy-2-(3-nitrophenyl)-6-[(pyridin-4-
yl)methyl]pyridine (5; T1660). In a 25 mL round-bottom flask, 6-
(bromomethyl)-2-(3-nitrophenyl)-3-methoxypyridine (12; 164 mg,
0.51 mmol) was dissolved in 1,4-dioxane/water (2.5:1, 7 mL) and
then treated with pyridine-4-boronic acid (112 mg, 0.91 mmol),
K3PO4 (220 mg, 1.04 mmol), and Pd(dppf)Cl2 (45 mg, 0.062 mmol).
Argon was bubbled through the solution for 5 min; then the flask was
sealed under argon and heated to 90 °C for 5 h. The reaction mixture
was concentrated under reduced pressure, and the residue was
partitioned between ethyl acetate and water. The layers were
separated, and the organic phase was dried with Na2SO4 and
concentrated. The crude product was purified by silica gel
chromatography using 6% ACN/DCM to give 5 as a white solid:
1
40 mg (0.13 mmol, 24%); mp, 108.8−109.7 °C; H NMR (CDCl3,
400 MHz) δ 8.92 (t, J = 2.0 Hz, 1H), 8.56 (m, 2H), 8.35 (dt, J = 7.8
Hz, 1.3 Hz, 1H), 8.25 (ddd, 8.2 Hz, 2.2 Hz, 1.0 Hz, 1 H), 7.62 (t, J =
8.0 Hz, 1H), 7.31 (d, J = 8.6 Hz, 2H), 7.25 (d, J = 6.0 Hz, 2H), 7.15
(d, J = 8.6 Hz, 1 H), 4.19 (s, 2H), 3.92 (s, 3H); TOF MS ES+ m/z
321.9 [M + H]+; HRMS (ES+) Calcd for C18H15N3O3 [M + 1]+
322.1192, found 322.1195; HPLC method, tR = 2.47 min.
Production of [11C]Carbon Dioxide. [11C]Carbon dioxide (up to
∼85 GBq) was produced with a PETtrace cyclotron (GE Medical
Systems; Milwaukee, WI) according to the 14N(p,α)11C reaction by
irradiation of nitrogen gas38 (initial pressure, 160 psi; volume, 75 mL)
containing oxygen (1%) with a proton beam (16.5 MeV, 45 μA) for
20 or 40 min for radioligand production for monkey and human PET,
respectively.
Preparation of 2-(3-Nitrophenyl)-3-methoxy-6-[(1H-pyra-
zol-4-yl)methyl]pyridin-3-ol (6; T1650). In a 50 mL round-
bottom flask, 6-(bromomethyl)-2-(3-nitrophenyl)-3-methoxypyridine
(12; 520 mg, 1.66 mmol) was dissolved in 1,4-dioxane/water (4:1, 20
mL) and then treated with 1-Boc-4-(4,4,5,5-tetramethyl-1,3,2-
dioxaborolan-2-yl)-1H-pyrazole (750 mg, 2.55 mmol), K3PO4 (680
mg, 3.2 mmol), and Pd(dppf)Cl2 (130 mg, 0.17 mmol). Argon was
bubbled through the solution for 5 min, and then the flask was sealed
under argon and heated to 90 °C for 15 h. The reaction mixture was
concentrated under reduced pressure, and the residue was partitioned
between ethyl acetate and water. The layers were separated, and the
organic phase was dried with Na2SO4 and concentrated. The crude
product was purified by silica gel chromatography using 50% ethyl
acetate/hexanes to give 6 as a white solid: 230 mg (0.74 mmol, 45%);
mp, 115.7−117.5 °C; 1H NMR (DMSO-d6, 400 MHz) δ 8.77 (t, J =
1.9 Hz, 1H), 8.42 (d, J = 7.9, 1.3 Hz, 1H), 8.25 (m, 1 H), 7.76 (t, J =
8.0 Hz, 1H), 7.59 (d, J = 8.6 Hz, 2H), 7.41 (brd s, 1H), 7.29 (d, J =
8.6 Hz, 1H), 3.96 (s, 2H), 3.88 (s, 3H); TOF MS ES+ m/z 311.1 [M
+ H]+, 352.1 [M + ACN + H]+; HRMS (ES+) Calcd for C16H15N4O3
[M + 1]+ 311.1144, found 322.1149; HPLC Method A, tR = 2.96 min.
PDE4 Enzyme Inhibition Assay. Methods used to generate
synthetic genes for human PDE4 subtypes were as described
previously.23 Compounds were tested for PDE4D inhibition and
counter-screened for selectivity against PDE4B, whose allosteric
Production of [11C]Iodomethane. [11C]Iodomethane was pro-
duced from [11C]carbon dioxide in a PETtrace MeI Process Module
or a TracerLab FXC module (GE Medical Systems, Severna Park,
MD) to produce radioligands for monkey and human PET,
respectively. Thus, at the end of proton irradiation, [11C]carbon
dioxide was delivered to the apparatus through stainless tubing (OD
1/8 in, ID 1/16 in) over 3 min, trapped on molecular sieves (13×),
released for reduction to [11C]methane with hydrogen over nickel at
360 °C, and recirculated over iodine at 720 °C.39 The generated
[11C]iodomethane was trapped on Porapak Q held in the
recirculation path.
Syntheses of Radioligands. Desmethyl-precursor (3 μmol) was
dissolved in DMF (80 μL). Either tetra-butylammonium hydroxide in
MeOH (1 M; 3.15 μL; 1.05 μmol) or potassium tert-butoxide in THF
(1 M; 3.15 μL; 1.05 μmol) was added to this solution and then
injected into the loop of an AutoLoop apparatus (Bioscan;
Washington, DC). [11C]Iodomethane was released into the loop of
the apparatus, which was then kept at room temperature for 5 min.
The radioligand was isolated with reversed phase HPLC (see SI Table
times, and radiochromatograms). After removal of mobile phase, the
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ACS Chem. Neurosci. XXXX, XXX, XXX−XXX