7510
V. M. Tanis et al. / Bioorg. Med. Chem. Lett. 22 (2012) 7504–7511
Table 7
Rat pharmacokinetic data for 1-atom linker thiazolo-pyridines 12c and 12d
Compd.
Structure
IV (2 mg/kg)
Cl (L/h/kg)
PO (10 mg/kg)
t1/2 (h)
Vss (L/kg)
%F
Cmax (lM)
O
O
N
N
N
N
12c
3.3
0.42
1.2
1.4
125
3.3
1.2
S
S
N
O
O
H
HN
12d
2
3.5
65
N
N
4-pyrrolidinone 12a and the 2,5-diazabicyclo[2.2.1]heptane acet-
amide 12c are noteworthy for their good LTB4/MPO inhibitory
activities. Compound 7a inhibited dofetilide binding to the hERG
Acknowledgments
The authors are grateful to Jennifer Buenviaje for determining
the hERG IC50 values; Kia Sepassi for compound formulations and
developability; and the Bioanalytical group for PK analysis.
channel with an IC50 = 8.9
not be readily differentiated in this assay, presenting IC50 values
of >10 M. An examination of these five compounds in a hERG
patch clamp assay was also unrevealing as each is associated with
an IC50 > 10
M.20 In an attempt to discern the impact on enzy-
lM, while compounds 12a–d could
l
References and notes
l
matic inhibitory activity of alternative asymmetry (2,5-diazabicy-
clo[2.2.1]heptane acetamide) and axial vs equatorial preference
(tropane acetamide), these amines (not exemplified) were utilized
in place of those shown in Table 6 (12c and 12d) to provide com-
pounds which were identical in their in vitro and in vivo activity to
those exemplified (12c and 12d).
Compounds 7a and 12a–d (Table 6) all present a desirable col-
lection of attributes. As an example, compounds 12c and 12d were
further evaluated in rat PK (Table 7). These compounds exhibit low
to moderate clearance and a moderate to high steady state volume
of distribution. Both 12c and 12d display high oral bioavailability
and moderate intravenous half-lives.
In order to discern the impact of backbone flexibility, com-
pounds 10c (cLogD 3.28), 11c (cLogD 2.86) and 12a (cLogD
3.21) were compared. As the tether length is decreased, there is
no smooth progression in cLogD due to the electronic impact of
structural variation. However, the hERG patch clamp assay for
these compounds shows the effect of decreasing backbone
1. Thunnissen, M. M.; Nordlund, P.; Haeggstrom, J. Z. Nat. Struct. Biol. 2001, 8, 131.
2. Brocklehurst, W. E. Prog. Allergy 1962, 6, 539.
3. (a) Del Prete, A.; Shao, W.-H.; Mitola, A.; Santoro, G.; Sozzani, S.; Haribabu, B.
Blood 2007, 109, 626; (b) Goetzl, E. J.; Goldman, D. W.; Naccache, P. H.; Sha’afi,
R. I.; Pickett, W. C. Adv. Prostaglandin, Thromboxane, Leukotriene Res. 1982, 9,
273; (c) Goodarzi, K.; Goodarzi, M.; Tager, A. M.; Luster, A. D.; von Andrian, U.
H. Nat. Immunol. 2003, 4, 965; (d) Haeggstrom, J. Z.; Kull, F.; Rudberg, P. C.;
Tholander, F.; Thunnissen, M. M. Prostaglandins Other Lipid Mediat. 2002, 68–69,
495; (e) Heller, E. A.; Liu, E.; Tager, A. M.; Sinha, S.; Roberts, J. D.; Koehn, S. L.;
Libby, P.; Aikawa, E. R.; Chen, J. Q.; Huang, P.; Freeman, M. W.; Moore, K. J.;
Luster, A. D.; Gerszten, R. E. Circulation 2005, 112, 578; (f) Iizuka, Y.; Yokomizo,
T.; Terawaki, K.; Komine, M.; Tamaki, K.; Shimizu, T. J. Biol. Chem. 2005, 280,
24816; (g) Lundeen, K. A.; Sun, B.; Karlsson, L.; Fourie, A. M. J. Immunol 2006,
177, 3439; (h) Munoz, N. M.; Douglas, I.; Mayer, D.; Herrnreiter, A.; Zhu, X.; Leff,
A. R. Am. J. Respir. Crit. Care Med. 1997, 155, 1398; (i) Ott, V. L.; Cambier, J. C.;
Kappler, J.; Marrack, J. P.; Swanson, B. J. Nat. Immunol. 2003, 4, 974.
4. (a) Jupp, J.; Hillier, K.; Elliott, D. H.; Fine, D. R.; Bateman, A. C.; Johnson, P. A.;
Cazaly, A. M.; Penrose, J. F.; Sampson, A. P. Inflamm. Bowel Dis. 2007, 13, 537; (b)
Rask-Madsen, J. Drugs Today 1998, 34, 45; (c) Sharon, P.; Stenson, W. F.
Gastroenterology 1984, 86, 453.
5. (a) Marian, E.; Baraldo, S.; Visentin, A.; Papi, A.; Saetta, M.; Fabbri, L. M.;
Maestrelli, P. Chest 2006, 129, 1523; (b) Barnes, P. J. Nat. Rev. Drug Disc. 2002, 1,
437; (c) Gompertz, S.; Stockley, R. A. Chest 2002, 122, 289.
6. (a) Chen, X.; Wang, S.; Wu, N.; Yang, C. S. Curr. Cancer Drug Targets 2004, 4, 267;
(b) Gao, P.; Guan, L.; Zheng, J. Biochem. Biophys. Res. Commun. 2010, 402, 308;
(c) Ihara, A.; Wada, K.; Yoneda, M.; Fujisawa, N.; Takahashi, H.; Nakajima, A. J.
Pharmacol. Sci. 2007, 103, 24; (d) Jeong, C. H.; Bode, A. M.; Pugliese, A.; Cho, Y.
Y.; H. Kim, H. G.; Shim, J. H.; Jeon, Y. J.; Li, H.; Jiang, H.; Dong, Z. Cancer Res.
2009, 69, 5584; (e) Larre, S.; Tran, N.; Fan, C.; Hamadeh, H.; Champigneulles, J.;
Azzouzi, R.; Cussenot, O.; Mangin, P.; Olivier, J. L. Prostaglandins Other Lipid
Mediat. 2008, 87, 14; (f) Oi, N.; Jeong, C. H.; Nadas, J.; Cho, Y. Y.; Pugliese, A.;
Bode, A. M.; Dong, Z. Cancer Res. 2010, 70, 9755; (g) Tong, W. G.; Ding, X. Z.;
Talamonti, M. S.; Bell, R. H.; Adrian, T. E. Biochem. Biophys. Res. Commun. 2005,
335, 949; (h) Tsuji, F. H. M.; Enomoto, H.; Aono, H. Curr. Top. Pharmacol. 2005, 9,
71.
flexibility with the 3-atom tether 10c IC50 of 2.5
2-atom tether 11c has an IC50 of 2.8 M, and the least flexible
1-atom tether 12a is associated with an IC50 > 10 M. Within the
1-atom tether series (Table 6), the cLogD values range from 1.21
to 3.21, varying as additional rigidity is introduced in the form of
a bicyclo-[3.3.0] moiety (12b, cLogD 2.82), a bicyclo-[2.2.1] sub-
unit (12c, cLogD 2.89), and a bicyclo-[3.2.1] fragment (12d, cLogD
1.21). Five of the six compounds of Table 6 (7a, 12a–d) were exam-
ined in a hERG patch clamp assay and all compounds had
lM, while the
l
l
7. (a) Griffiths, R. J.; Pettipher, E. R.; Koch, K.; Farrell, C. A.; Breslow, R.; Conklyn,
M. J.; Smith, M. A.; Hackman, B. C.; Wimberly, D. J.; Milici, A. J. Proc. Natl. Acad.
Sci. U.S.A. 1995, 92, 517; (b) Shao, W. H.; Del Prete, A.; Bock, C. B.; Haribabu, B. J.
Immunol. 2006, 176, 6254; (c) Tsuji, F.; Oki, K.; Fujisawa, K.; Okahara, A.;
Horiuchi, M.; Mita, S. Life Sci. 1999, 64, PL51; (d) Chen, M.; Lam, B. K.; Kanaoka,
Y.; Nigrovic, P. A.; Audoly, L. P.; Austen, K. F.; Lee, D. M. J. Exp. Med. 2006, 203,
837.
8. (a) Lemiere, C.; Pelissier, S.; Tremblay, C.; Chaboillez, S.; Thivierge, M.;
Stankova, J.; Rola-Pleszczynski, M. Clin. Exp. Allergy 2004, 34, 1684; (b) Luster,
A. D.; Tager, A. M. Nat. Rev. Immunol. 2004, 4, 711; (c) Montuschi, P.; Sala, A.;
Dahlen, S. E.; Folco, G. Drug Discov. Today 2007, 12, 404; (d) Rubin, P.; Mollison,
K. W. Prostaglandins Other Lipid Mediat. 2007, 83, 188; (e) Terawaki, K.;
Yokomizo, T.; Nagase, T.; Toda, A.; Taniguchi, M.; Hashizume, K.; Yagi, T.;
Shimizu, T. J. Immunol. 2005, 175, 4217; (f) Duroudier, N. P.; Tulah, A. S.; Sayers,
I. Allergy 2009, 64, 823; (g) Fourie, A. M. Curr. Opin. Investig. Drugs 2009, 10,
1173; (h) Montuschi, P. Pharmaceuticals 2010, 3, 1792; (i) Montuschi, P.;
Peters-Golden, M. L. Clin. Exp. Allergy 2010, 40, 1732; (j) Rao, N. L.; Riley, J. P.;
IC50 > 10 lM. Clearly, restricting backbone flexibility by shortening
the tether and introducing amines with additional polarity and/or
rigid cage structures, while keeping within a relatively narrow
range of cLogD, has a positive effect on the hERG patch clamp
outcome.
The data of Table 6 suggest that the design plans to continue to
optimize the desirable LTA4H activity while minimizing potential
liabilities has been realized. Reducing flexibility appears to have
greatly reduced the potential for a hERG liability, as measured in a
patch clamp assay. This stands in contrast to the more standard
hERG binding assessment, which for this series did not allow for
sufficient prioritization. The 1-atom linker molecules may offer
the best combination of properties to warrant further investigation.