M. Saleh et al. / Bioorg. Med. Chem. Lett. 20 (2010) 945–949
949
5. Menicagli, R.; Samaritani, S.; Signore, G.; Vaglini, F.; Via, L. D. J. Med. Chem.
2004, 47, 4649.
6. Melato, S.; Prosperi, D.; Coghi, P.; Basilico, B.; Monti, D. ChemMedChem 2008, 3,
873. and references cited therein.
7. Xiong, Y.-Z.; Chen, F.-E.; Balzarini, J.; De Clercq, E.; Pannecouque, C. Eur. J. Med.
Chem. 2008, 43, 1230. and references cited therein.
8. (a) Zhou, C.; Min, J.; Liu, Z.; Young, Z.; Deshazer, H.; Gao, T.; Chang, Y.-T.;
Kallenbach, R. Bioorg. Med. Chem. Lett. 2008, 18, 1308; (b) Srinivas, K.; Srinivas,
U.; Bhanuprakash, K.; Harakishore, K.; Murthy, U. S. N.; Jayathirtha Rao, V. Eur.
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hydroxyphenyl (30) possessed comparable antibacterial but only
weak antifungal activities relative to 7. In contrast, the correspond-
ing analogue with R2 = 3-pyridine (18) or 5-fluoro-3-pyridine (20)
displayed a loss of activity against all strains. Interestingly, replace-
ment of 3-fluorophenyl (R1) of triazine 7 with 4-fluorophenyl (14)
resulted in an increase in antibacterial activity especially against
S. epidermidis and B. cereus, as well as reasonable activity against
C. albicans and A. niger. Also, an analogue of (14) was synthesized
in which R2 was the 3-pyridyl group (19). As in the case of com-
pounds 18 and 20, activity declined against the selected organisms
upon replacement of fluorophenyl with 3-pyridyl substituent. Di-
rect substitution of the triazine ring with 3-fluorophenyl at position
R and R2, maintaining pentylamine at R1 (31), resulted in an in-
crease in activity against S. epidermidis and C. albicans compared
to 7. An analogue of (14) was synthesized in which R1 is tyramine
(11) instead of 4-fluorophenyl. This compound possessed antibacte-
rial activity comparable with triazine 7 for S. epidermidis and B. cer-
eus. Similar antifungal results were obtained by replacement of the
R2 substituent of 11 (3-fluorophenyl) by 4-fluorophenyl (compound
10). The corresponding analogue with R2 4-fluoroaniline (5) yields
reduced activity. Interestingly, introduction of rigidity in R of tri-
azine 11 (compound 12) slightly improves the antibacterial and
the antifungal activities. However, replacement of R2 (3-fluoro-
phenyl) of 12 by 4-fluorophenyl 13 resulted in reduction of activity.
In summary, a number of low molecular weight synthetic mol-
ecules of structural type 2-(fluorophenyl)-4,6-disubstituted
[1,3,5]triazines (1) were prepared and evaluated for their antimi-
crobial activity against various gram-positive bacteria and fungi.
Three lead compounds 14, 15 and 25 displayed the best activity
against the five selected organisms. SAR studies demonstrate the
importance of the presence of at least one substituent such as a
3- or 4-fluorophenyl group attached directly to the triazine ring.
Also, it can be seen that a rigid diamine at one of the triazine sub-
stituents is preferred since activity is increased by introducing
rigidity at this position. This class of compounds is safe, nontoxic9
and displayed promising antimicrobial activity.
9. Unpublished results.
10. The purity and identity of all the products were monitored by LC/MS at 210 or
250 nm (Agilent 1100) using an analytical C18 column (75 Â 4.6 mm, 5
lm)
with a gradient of CH3CN–H2O (15–99%/10 min) containing 0.01% TFA as the
eluant. All compounds demonstrated >98% purity. 1H NMR and ESI-MS
characterization data were consistent with the expected structures. For
example, data for compound 7: 1H NMR (CD3OD, 400 MHz) d: 8.12 (d,
J = 7.8 Hz, 1H), 8.04 (d, JHF = 9.6 Hz, 1H), 7.72–7.79 (m, 1H), 7.67 (ddd, J = 8.0,
8.0, 5.7 Hz, 1H), 7.51 (ddd, J = 8.2, 8.2, 2.0 Hz, 1H), 7.38–7.45 (m, 2H), 6.96–7.01
(m, 1H), 3.61 (t, J = 7.0 Hz, 2H), 2.95 (t, J = 7.6 Hz, 2H), 1.83–1.95 (m, 2H), 1.73
(tt, J = 7.6, 7.6 Hz, 2H), 1.50–1.58 (m, 2H). 19F NMR (CD3OD, 377 MHz) d:
À113.45 to À113.35 (m, 1F), À113.99 (s, 1F). LRMS (ESI): m/z 385.2 (MH+).
HPLC: tR = 4.86 min; (254 nm) 100%.
Data for compound 14: 1H NMR (CD3OD, 400 MHz) d: 8.09 (d, J = 8.0 Hz, 1H),
8.02 (d, J = 8.6 Hz, 1H), 7.62–7.74 (m, 3H), 7.51 (dd, J = 8.6, 8.0 Hz, 1H), 7.19 (dd,
JHF = 8.7 Hz, JHH = 8.7 Hz, 2H), 3.56 (t, J = 7.0 Hz, 2H), 2.93 (t, J = 7.6 Hz, 2H),
1.66–1.79 (m, 4H), 1.33–1.54 (m, 2H). 19F NMR (CD3OD, 377 MHz) d: À113.47
(s, 1F), À118.70 (s, 1F). LRMS (ESI): m/z 385.2 (MH+). HPLC: tR = 4.65 min;
(254 nm) 95.0%.
Data for compound 15: 1H NMR (CD3OD, 400 MHz) d: 8.33 (dd, JHF = 5.3 Hz,
JHH = 8.6 Hz, 2H), 7.73–7.81 (m, 1H), 7.33–7.44 (m, 4H), 6.95–7.00 (m, 1H), 3.60
(t, J = 7.1 Hz, 2H) , 2.94 (t, J = 7.5 Hz, 2H), 1.69–1.83 (m, 4H), 1.50–1.57 (m, 2H).
19F NMR (CD3OD, 377 MHz) d: À106.08 (s, 1F), À114.09 (s, 1F). LRMS (ESI): m/z
385.2 (MH+). HPLC: tR = 4.73 min; (254 nm) 100%.
Data for compound 24: 1H NMR (CD3OD, 400 MHz) d: 8.17 (d, J = 7.8 Hz, 1H),
8.07 (d, JHF = 9.6 Hz, 1H), 7.59–7.70 (m, 2H), 7.33–7.52 (m, 3H), 6.96–7.02 (m,
1H), 3.53 (s, 2H), 2.91 (s, 2H), 1.14 (s, 6H). 19F NMR (CD3OD, 377 MHz) d:
À114.3 to À113.4 (m, 2F). LRMS (ESI): m/z 385.2 (MH+). HPLC: tR = 4.78 min;
(254 nm) 100%.
Data for compound 25: 1H NMR (CD3OD, 400 MHz) d: 8.13 (d, J = 8.0 Hz, 1H),
8.04 (d, J = 9.6 Hz, 1H), 7.74–7.84 (m, 1H), 8.04 (ddd, JHF = 5.5 Hz, JHH = 8.1,
8.1 Hz, 1H), 7.31–7.49 (m, 3H), 6.94–6.99 (m, 1H), 3.56–3.62 (m, 1H), 3.43–3.50
(m, 2H), 3.33–3.38 (m, 1H), 2.88–2.96 (m, 1H), 2.80 (t, J = 12.0 Hz, 1H), 2.24–
2.33 (m, 1H), 1.96–2.05 (m, 2H), 1.70–1.81 (m, 1H), 1.34–1.46 (m, 1H). 19F NMR
(CD3OD, 377 MHz) d: À113.90 (s, 1F), À114.26 (s, 1F). LRMS (ESI): m/z 397.2
(MH+). HPLC: tR = 4.84 min; (254 nm) 97.5%.
Data for compound 27: 1H NMR (CD3OD, 400 MHz) d: 8.11 (d, J = 7.8 Hz, 1H),
8.03 (d, JHF = 9.1 Hz, 1H), 7.76–7.83 (m, 1H), 7.67 (ddd, J = 8.0, 8.0, 5.7 Hz, 1H),
7.51 (ddd, J = 8.2, 8.2, 2.0 Hz, 1H), 7.37–7.45 (m, 2H), 6.95–7.00 (m, 1H), 3.45 (d,
J = 6.7 Hz, 2H), 2.79 (d, J = 7.0 Hz, 2H), 1.87–2.01 (m, 4H), 1.75–1.85 (m, 1H),
1.59–1.70 (m, 1H), 1.03–1.21 (m, 4H). 19F NMR (CD3OD, 377 MHz) d: À113.5 to
À113.4 (m, 1F), À114.08 (s, 1F). LRMS (ESI): m/z 425.2 (MH+). HPLC:
tR = 5.09 min; (254 nm) 100%.
Acknowledgment
We thank Lyne Marcil for the skillful preparation of this
manuscript.
Compound 31: 1H NMR (CDCl3, 400 MHz) d: 8.39 (br s, 3H), 8.26–8.71 (m, 2H),
8.11–8.16 (m, 2H), 7.67 (ddd, J = 7.8, 7.8, 5.7 Hz, 2H), 7.23–7.31 (m, 2H), 3.63–
3.69 (m, 2H), 2.98–3.06 (m, 2H), 1.81–1.86 (m, 2H), 1.70–1.77 (m, 2H), 1.58–
1.67 (m, 2H). 19F NMR (CDCl3, 377 MHz) d: À111.55 to À111.40 (m, 1F),
À112.60 to À112.55 (m, 1F). LRMS (ESI): m/z 370.2 (MH+). HPLC: tR = 5.19 min;
(254 nm) 100%.
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