Journal of the American Chemical Society
Article
(s, 6H, CH3), 3.23−3.28 (m, 4H, methoxyethanamide CH2), 3.37−
3.41 (m, 12H, methoxyethanamide CH2, tren CH2), 3.49 (q, J = 6.7
Hz, tren CH2), 4.89 (s, 8H, Bn CH2), 5.06 (s, 4H, Bn CH2), 5.07 (s,
4H, Bn CH2), 6.90 (s, 4H, ArH), 7.31−7.42 (m, 40H, Ph), 7.43 (d, J =
10.5 Hz, 2H, ArH), 7.49 (d, J = 10.5 Hz, 2H, ArH), 7.62 (t, J = 6.5 Hz,
2H, amide H), 7.69 (t, J = 6.5 Hz, 4H, amide H), 8.07 (t, J = 5.5 Hz,
2H, amide H). 13C NMR (100 MHz, CD2Cl2): δ 36.7, 37.0, 39.6, 51.8,
52.4, 58.3, 70.6, 76.3, 76.8, 76.9, 124.7, 125.4, 125.8, 128.3, 128.3,
128.5, 128.5, 128.5, 128.6, 130.2, 132.0, 136.1, 136.3, 136.7, 150.3,
150.5, 150.5, 164.3, 164.7, 164.7. HRMS-ESI (m/z): [M + Na]+ calcd
for C106H110O18N10Na+ 1833.7892, found 1833.7866.
aromatic rings). The free ligand crystallized with two chlorine atoms
(balancing the charge on the protonated tertiary amines) and four
water molecules per ligand molecule. The thorium complex crystal-
lized with four potassium atoms, as well as two dimethylformamide,
one tetrahydrofuran, and two methanol molecules per asymmetric
unit. Disordered solvent molecules in this crystal structure (all but one
methanol) were modeled with occupancies of less than 1. One of the
methoxyethyl substituents (atoms C37, O18, C38 and the attached
hydrogens) on the pendant terephthalamide units showed some
disorder, which could be satisfactorily modeled over two positions.
The structure diagrams in Figure 2 were created using ORTEP-32.27
Computational Studies. DFT calculations were performed at the
UC Berkeley Molecular Graphics and Computation Facility with
Gaussian 09 software and the GaussView graphical user interface.28
The geometries and energies of the complexes were optimized at the
B3LYP level with the 6-31G basis set for all atoms except the thorium
atoms, for which the Stuttgart/Dresden ECP60MWB_SEG basis set
was used to model a 60-electron small core pseudopotential,
incorporating quasi-relativistic effects.10
LH8·3HCl. A 5 mL portion of 12.1 N HCl was added to a solution
of 8 (0.32466 g, 0.179 mmol) dissolved in 5 mL of glacial acetic acid.
The solution was stirred at room temperature for 64 h and dried in
vacuo. The resulting light yellow cake was suspended in 10 mL of
MeOH and dried 3 times to give a light yellow solid. Further drying of
this solid under vacuum overnight yielded a light gray solid (89%). 1H
NMR (500 MHz, D2O + NaOD): δ 2.883 (t, J = 7.3 Hz, 4H, tren
CH2), 2.93 (t, J = 6.0 Hz, 8H, tren CH2), 3.34 (s, 6H, CH3), 3.41 (t,
6.3 Hz, 8H), 3.49−3.53 (m, 8H, tren CH2, methoxyethanamide CH2),
3.60 (t, J = 5.5 Hz, 4H, methoxyethanamide CH2), 6.54 (s, 4H, ArH),
6.87 (s, 2H, ArH), 6.87 (s, 2H, ArH). 13C NMR (125 Hz, DMSO-d6):
δ 34.3, 34.4, 39.5, 49.0, 50.4, 51.6, 51.9, 58.4, 70.5, 116.6, 116.7, 116.9,
117.0, 117.3, 118.4, 119.6, 149.5, 150.5, 150.6, 150.9, 169.0, 169.1,
170.8. HRMS-ESI (m/z): [M + Na]+ calcd for C50H62O18N10Na+
Kinetic Studies. Indirect Kinetics. Arsenazo III (Sigma-Aldrich)
was twice purified by HPLC prior to use. The dye (100 mg) was
dissolved in Millipore water, filtered through a 0.22 uM nylon syringe
filter, and separated on a preparatory Varian Dynamax 250 × 41.1 mm
C18 column. A solvent gradient of 0−18% acetonitrile/H2O (0.1%
TFA) was used to collect three fractions with intense UV absorbances.
The fraction with the most intense absorbance (tR 15−16 min) was
collected as the main product, without the front or back tailing
material. This fraction was rotary evaporated, and the dark purple-
green solid was resuspended in methanol before drying under vacuum
−
1113.4136, found 1113.4126; [M − H]− calcd for C50H61O18N10
1089.4171, found 1089.4170. Anal. Calcd (found) for C50H62O18N10·
3HCl: C, 50.03 (50.38); H, 5.46 (5.58); N, 11.67 (11.51). 11.51. Anal.
Calcd (found) for C50H62O18N10·3HCl (Columbia Analytical Serv-
ices): C, 50.03 (50.01); Cl, 8.9 (7.0); H, 5.46 (5.64); N, 11.67 (11.30).
[ThL]4K. LH8·3HCl (13.65 mg, 0.0114 mmol) was suspended in 7
mL of methanol at 45 °C. A solution of Th(NO3)4·4H2O (Alfa, 6.12
mg, 0.0111 mmol) in 1 mL of MeOH was added dropwise to the
ligand solution while stirring, causing an immediate color change to
yellow. A stoichiometric amount of 1 M KOH in methanol (0.09 mL,
0.0910 mmol) was added to the ligand suspension dropwise, to a pH
of 8, solubilizing the reaction mixture. (The thorium solution can be
added after the base.) The reaction mixture was refluxed under
nitrogen flow for 3 h. Once cooled to room temperature, the product
was precipitated by addition of diethyl ether and concentration of the
reaction mixture. The tan precipitate was filtered and dried overnight
overnight. HRMS-ESI (m/z): [M
−
2H]2− calcd for
2−
C22H16As2O14N4S2 386.9274, found 386.9279. Anal. Calcd (found)
for C22H18As2O14N4S2·2H2O: C, 32.53 (32.34); H, 2.73 (2.73); N,
6.90 (6.71).
UV−vis spectra were acquired on a Hewlett-Packard 8453 diode
array spectrometer at 25 °C. The temperature was controlled by a
recirculating water bath connected to the jacketed cell holder. Samples
were measured in small volume (50 μL) quartz cuvettes with 1 cm
path lengths. Solutions were buffered with 100 mM HEPES at pH 7.4
(at 25 °C, with 0.1 M KCl). Complexation of the thorium and dye was
performed by combining aqueous stock solutions of standardized Th4+
in nitric acid (pH 1.4, 1 mM, diluted from a 10 mM solution, the
standardization is described in the next section) and an excess of
purified dye (1 mM). The solution was let sit on the bench at room
temperature for 30 min, diluted in buffer, and let sit at room
temperature for 1 h. The absorbance was monitored starting from the
addition of ligand, as a solution of DMSO ligand stock solution (5
mM) and buffer (equilibrated for 15 min beforehand). DOTA was
purchased from Sigma-Aldrich. The A vs t plots were fit with a first-
order decay equation in Origin 6.1 at wavelengths corresponding to
the appearance of free dye (550, 560 nm) and the disappearance of
thorium−dye complex (614, 669, 700 nm).
Stopped-Flow Kinetics. The stopped-flow kinetic experiments were
performed using a stopped-flow apparatus equipped with an OLis
rapid-scanning monochromator 1000 and a 75 W Xe lamp. Upon
electronic activation, the apparatus (powered by Ar flow) mixes 100
μL of each solution in the two syringes into a mixing chamber. This
mixture is injected into a separate chamber, where the flow is stopped
and UV spectra are taken. One syringe contained 10 μM Th4+ in 79
mM HNO3 (pH 1.4), while the other held a solution of 50−300 μM
ligand, in 200 mM HEPES (pH 8.3) and 10% DMSO. The 1:1 mixture
of these solutions was 5 μM Th, 25−150 μM ligand, 100 mM HEPES
(pH 7.4). UV spectra in the 305−454 nm range were collected for
1.5−10 s, depending on the concentrations of the starting materials, at
rates of 31−1000 scans/s. The data were analyzed using the program
SpecFit to simultaneously use the absorbance at all of the wavelengths
to obtain a second-order rate constant.
1
under vacuum, resulting in a light brown solid (15.11 mg, 93%). H
NMR (500 MHz, D2O + NaOD + DMSO-d6): 2.264 (br t, 2H, tren
CH2), 2.365 (br t, 4H, tren CH2), 2.647 (br t, 4H, tren CH2), 3.069 (s,
6H, CH3), 3.133−3.259 (m, 14H, tren CH2, methoxyethanamide
CH2), 3.510 (d, J = 10 Hz), 4H, methoxyethanamide CH2), 3.743 (d, J
= 11.5 Hz, tren CH2), 6.662−6.681 (d, 2H, ArH; s, 4H, ArH), 6.785
(d, J = 8.5 Hz, ArH). 13C NMR (125 Hz, DMSO-d6): δ 36.2, 38.2,
38.8, 40.3, 56.1, 58.3, 58.4, 58.5, 70.8, 72.2, 109.6, 109.8, 114.5, 114.6,
114.7, 168.3, 168.5, 168.9, 169.0, 171.0, 171.2, 171.4. HRMS-ESI (m/
z): [M + H]3− calcd for C50H54O18N10Th3− 438.1338, found 438.1355.
X-ray Crystallography. Single crystals of LH8 suitable for XRD
were grown by the vapor diffusion of acetonitrile into an aqueous
solution of the protonated ligand. Single crystals of ThLK4 were grown
by the vapor diffusion of 1:1 diethyl ether:tetrahydrofuran into a
solution of the complex in 1:20 dimethylformamide:methanol.
Selected crystals were mounted in Paratone N oil at the end of a
captan loop and frozen in place under a low-temperature nitrogen
stream. The data were collected on Bruker MicroSTAR-H X8 APEX-II
CCD with Cu Kα radiation (LH8) or SMART APEX-I CCD with Mo
Kα radiation (ThLK4) X-ray diffractometers. Intensity data were
extracted from the frames with the program APEX2. The data were
corrected for Lorentz and polarization effects, and an empirical
absorption correction was applied using the SADABS program.24 The
structures were solved by direct methods and refined using full-matrix
least-squares refinements based on F2 in SHELXL-97.25 Crystallo-
graphic analyses were performed using the WinGX system of
programs.26 All non-hydrogen atoms were refined anisotropically,
while hydrogen atoms were assigned to idealized positions (with the
exception of the hydrogens in LH8 bound to heteroatoms and
Solution Thermodynamics. All spectrophotometric titrations
were carried out with constant stirring and a blanket of Ar flow in a
jacketed cell connected to a recirculating water bath to maintain the
temperature at 25 °C. The ionic strength of all solutions was
H
dx.doi.org/10.1021/ja503456r | J. Am. Chem. Soc. XXXX, XXX, XXX−XXX