Effect of Ceramide Analogues on Axonal Growth
J ournal of Medicinal Chemistry, 1999, Vol. 42, No. 14 2703
HCdCHPh), 6.71 (1 H, d, J ) 16 Hz, HCdCHPh), 7.3-7.45
(2S,3S,4E)-2-Am in o-4-d od ecen e-1,3-d iol (19). The same
procedure as described for 18 was followed, starting from
compound 12. Alternatively, 19 can be obtained by treatment
of 3 with lithium and EtNH2. Thus, EtNH2 (6 mL) was added
to lithium (0.15 g, 0.02 mol) at -78 °C under N2. After 2 h, a
solution of 3 (0.5 g, 1.41 mmol) in dry THF (8 mL) was added
dropwise to the mixture. The reaction was quenched after 4.5
h by adding a saturated NH4Cl solution (5 mL). EtNH2 and
THF were removed under reduced pressure, and the residue
was diluted with H2O (20 mL) and extracted with Et2O (4 ×
25 mL). The organic layers were washed with brine and dried
over Na2SO4, which afforded 0.4 g of crude 19. For identifica-
tion purposes, a small amount was purified by flash chroma-
tography (CH2Cl2/CH3OH/2 M NH3, 80:20:2): [R]D ) -16.79
(5 H, m, arom.).
ter t-Bu tyl (4S,5S)-2,2-Dim eth yl-4-[(E)-2-ph en yleth en yl]-
1,3-d ioxa n -5-ylca r ba m a te (17). The same procedure as
described for 16 was followed, using 27 mg (0.09 mmol) of 13,
23 mg of PPTS, and 0.226 mL (1.83 mmol) of DMP: 1H NMR
(CDCl3) δ 1.32-1.6 (15 H, m, t-Bu, 2 CH3), 3.68 (1 H, d, J )
9.8 Hz, H-C(5)), 3.82 (1H, d, J ) 12 Hz, H-C(6)), 4.17 (1 H,
d, J ) 12 Hz, H-C(6)), 4.69-4.74 (1 H, m, H-C(4)), 5.36 (1
H, d, J ) 10 Hz, NH), 6.13 (1H, dd, J ) 16 and 4.8 Hz, HCd
CHPh), 6.65 (1 H, d, J ) 16 Hz, HCdCHPh), 7.28-7.42 (5 H,
m, arom.).
(2S,3R,4E)-2-Am in o-4-d od ecen e-1,3-d iol (18). To a solu-
tion of 10 (0.28 g, 0.87 mmol) in dioxane (9 mL) was added 1
N HCl (4.35 mL). The solution was stirred for 30 min at 100
°C and, after cooling to room temperature, neutralized with 1
N NaOH (4.35 mL). The mixture was extracted with Et2O (3×),
and the combined organic layers were washed with brine and
dried over MgSO4. For identification purposes, a small amount
of the obtained (0.18 g) crude amine was purified by flash
chromatography (CH2Cl2/CH3OH/2 M NH3, 80:20:2): 1H NMR
(500 MHz, CDCl3) δ 0.89 (3 H, t, J ) 7 Hz, CH3-C(11)), 1.24-
1.43 (10 H, m, (CH2)5), 1.82 (4 H, br s, NH2, 2 OH), 2.08 (2 H,
q, J ) 7.1 Hz, 2H-C(6)), 2.95 (1 H, br s, H-C(2)), 3.58-3.78
(2 H, m, 2H-C(1)), 4.1 (1 H, br s, H-C(3)), 5.49 (1 H, dd, J )
14.9 and 6.1 Hz, H-C(4)), 5.77 (1 H, dt, J ) 15.3 and 6.8 Hz,
H-C(5)); HRMS (LSIMS) calcd for C12H26NO2 (M + H)+
216.1964, found 216.1966. Anal. (C12H25NO2) N; C: calcd,
66.93; found, 66. H: calcd, 11.7; found, 11.02.
1
(c 0.53, CH3OH); H NMR (CDCl3) δ 0.88 (3 H, t, J ) 6.8 Hz,
CH3-C(11)), 1.2-1.42 (10 H, m, (CH2)5), 2.05 (2 H, q, J ) 6.9
Hz, 2H-C(6)), 2.9 (1 H, br s, H-C(2)), 3.05 (4 H, br s,
exchangeable with D2O, NH2 and 2 OH), 3.53-3.6 (1 H, m,
H-C(1)), 3.68-3.75 (1 H, m, H-C(1)), 4.05 (1 H, br s, H-C(3)),
5.44 (1 H, dd, J ) 15.4 and 6.7 Hz, H-C(4)), 5.75 (1 H, dt, J
) 15.4 and 6.6 Hz, H-C(5)); HRMS (LSIMS) calcd for C12H26
-
NO2 (M + H)+ 216.1964, found 216.1978.
(2S,3S,4E)-2-(Hexan oylam in o)-4-dodecen e-1,3-diol (19a).
To a solution of crude amine 19 (0.4 g) in THF (9 mL) and a
50% aqueous NaOAc solution (9 mL) was added hexanoyl
chloride (0.16 mL, 1.16 mmol). After 2.5 h, the reaction mixture
was diluted with THF (20 mL) and brine (20 mL). The organic
layer was washed with brine and dried over MgSO4. Flash
chromatography (CH2Cl2/CH3OH, 97:3) afforded 0.3 g (62%
overall from alkynol 3) of ceramide 19a : [R]D ) -7.82 (c 1.01,
1
CHCl3); IR (cm-1, KBr) 3333, 2923, 1646; H NMR (CDCl3) δ
(2S,3R,4E)-2-Aceta m id o-4-d od ecen e-1,3-d iol (18a ). The
crude amine 18 (0.18 g, 0.82 mmol) was dissolved in dry CH2-
Cl2 (12 mL), to which HOBT (0.12 g, 0.87 mmol), acetic acid
(40 µL, 0.7 mmol), and DIC (136 µL, 0.87 mmol) were added.
The mixture was kept overnight at room temperature and then
concentrated under reduced pressure. Flash chromatography
(CH2Cl2/CH3OH, 95:5) afforded 0.15 g of 18a . The mixture of
esters formed during the reaction was treated with a 0.15 M
solution of K2CO3 in CH3OH. After hydrolysis to 18a , the
reaction mixture was diluted with H2O and extracted with
CH2Cl2. The organic layers were dried over MgSO4, and after
flash chromatography (CH2Cl2/CH3OH, 95:5), the total yield
0.85-0.95 (6 H, m, 2 CH3CH2), 1.2-1.4 (14 H, m, 7 CH2), 1.59-
1.72 (2 H, m, CH2CH2CO), 2.03 (2 H, q, J ) 6.9 Hz, 2H-C(6)),
2.22 (2 H, t, J ) 7.6 Hz, CH2CO), 2.72 (1 H, br s, OH), 2.88 (1
H, br s, OH), 3.8-3.85 (2 H, m, 2H-C(1)), 3.88-3.96 (1 H, m,
H-C(2)), 4.37-4.43 (1 H, m, H-C(3)), 5.48 (1 H, dd, J ) 15.4
and 6.4 Hz, H-C(4)), 5.75 (1 H, dt, J ) 15.3 and 6.8 Hz,
H-C(5)), 6.13 (1 H, d, J ) 7.5 Hz, NH); 13C NMR (CDCl3) δ
13.8, 14.0, 22.3, 22.6, 25.4, 29.0, 31.3, 31.7, 32.2, 36.7, 54.6
(C-2), 64.4 (C-1), 73.1 (C-3), 128.9 (C-5), 133.9 (C-4); HRMS
(LSIMS) calcd for C18H34NO3 (M - H)+ 312.2539, found
312.2519. Anal. (C18H35NO3) H, N; C: calcd, 68.97; found,
68.29.
of 18a was 0.16 g (71%): [R]D ) -6.94 (c 0.72, CHCl3); IR (cm-1
,
1
KBr) 3334, 2927, 1651; H NMR (CDCl3) δ 0.87 (3 H, t, J )
6.8 Hz, CH3-C(11)), 1.1-1.43 (12 H, m, (CH2)6), 2.01-2.09 (3
H, m, CH3CO), 3.69 (1 H, dd, J ) 11.3 and 3.2 Hz, H-C(1)),
3.86-3.91 (1 H, m, H-C(2)), 3.94 (1 H, dd, J ) 11.2 and 3.8
Hz, H-C(1)), 4.28-4.33 (1 H, m, H-C(3)), 5.52 (1 H, dd, J )
15.4 and 6.3 Hz, H-C(4)), 5.78 (1 H, dt, J ) 15.4 and 6.8 Hz,
H-C(5)), 6.43 (1 H, d, J ) 7.4 Hz, NH); 13C NMR (CDCl3) δ
13.9, 22.5, 23.3, 29.0, 31.7, 32.1, 54.5 (C-2), 62.2 (C-1), 74.5
(C-3), 128.7 (C-5), 134.1 (C-4), 170.1 (CdO); HRMS (LSIMS)
calcd for C14H28NO3 (M + H)+ 258.2069, found 258.2067.
(2S,3R,4E)-2-Am in o-5-p h en yl-4-p en t en e-1,3-d iol (20).
To a solution of 11 (0.9 g, 3 mmol) in dioxane (30 mL) was
added 1 N HCl (15 mL). The solution was stirred for 30 min
at 100 °C and, after cooling to room temperature, neutralized
with 1 N NaOH (15 mL). The mixture was extracted with Et2O
(3×) and EtOAc (3×), and the combined organic layers were
washed with brine and dried over MgSO4 to give 0.45 g (2.31
mmol) of the crude amine 20. For identification purposes, a
small amount was purified by column chromatography (CH2-
Cl2/CH3OH/2 M NH3, 90:10:1): [R]D ) 30.8 (c 0.38, CH3OH);
1H NMR (CD3OD) δ 2.94 (1 H, td, J ) 5.9 and 5.3 Hz, H-C(2)),
3.56 (1 H, dd, J ) 10.9 and 7 Hz, H-C(1)), 3.73 (1 H, dd, J )
11 and 4.5 Hz, H-C(1)), 4.24 (1 H, t, J ) 6.4 Hz, H-C(3)), 6.3
(1 H, dd, J ) 15.9 and 6.9 Hz, H-C(4)), 6.66 (1 H, d, J ) 16
Hz, H-C(5)), 7.2-7.45 (5 H, m, arom.); HRMS (LSIMS) calcd
for C11H16NO2 (M + H)+ 194.1181, found 194.1188.
(2S,3R,4E)-2-(Hexan oylam in o)-4-dodecen e-1,3-diol (18b).
To a solution of the crude amine 18 (0.68 g) (prepared from
10 (0.8 g, 2.54 mmol)) in dry CH2Cl2 (25 mL) were added HOBT
(0.34 g, 2.54 mmol), hexanoic acid (0.22 mL, 1.78 mmol), and
DIC (0.4 mL, 2.54 mmol). The mixture was stirred overnight
at room temperature and then concentrated under reduced
pressure. Column chromatographic purification (CH2Cl2/CH3-
OH, 95:5) afforded 0.64 g (81%) of 18b: [R]D ) -5.91 (c 1.02,
(2S,3R,4E)-2-Acet a m id o-5-p h en ylp en t -4-en e-1,3-d iol
(20a ). To a solution of 20 (0.23 g, 1.18 mmol) in dry CH2Cl2
(10 mL) were added HOBT (0.16 g, 1.18 mmol), acetic acid
(47 µL, 0.83 mmol), and DIC (185 µL, 1.18 mmol), at 0 °C.
The reaction was kept overnight and then concentrated under
reduced pressure. Flash chromatography (CH2Cl2/CH3OH, 93:
7) afforded 0.24 g of 20a (86%): [R]D ) -6.5 (c 0.43, CH3OH);
1
CHCl3); IR (cm-1, KBr) 3333, 2923, 1610; H NMR (CDCl3) δ
0.82-0.95 (6 H, m, 2 CH3CH2), 1.15-1.42 (14 H, m, 7 CH2),
1.58-1.70 (2 H, m, CH2CH2CO)), 2.05 (2 H, q, J ) 7 Hz, 2H-
C(6)), 2.23 (2 H, t, J ) 7.7 Hz, CH2CO), 3.18-3.3 (2 H, m, 2
OH, exchangeable with D2O), 3.63-3.73 (1 H, m, H-C(1)),
3.86-3.98 (2 H, m, H-C(1), H-C(2)), 4.25-4.32 (1 H, m,
H-C(3)), 5.5 (1 H, dd, J ) 15.4 and 6.4 Hz, H-C(4)), 5.76 (1
H, dt, J ) 15.4 and 6.7 Hz, H-C(5)), 6.37 (1 H, d, J ) 7.3 Hz,
NH); 13C NMR (CDCl3) δ 13.8, 14.0, 22.3, 22.6, 25.3, 29.0, 31.3,
31.7, 32.2, 36.7, 54.5 (C-2), 62.4 (C-1), 74.4 (C-3), 128.8 (C-5),
134.1 (C-4), 173.9 (CdO); HRMS (LSIMS) calcd for C18H36NO3
(M + H)+ 314.2695, found 314.2716. Anal. (C18H35NO3) H, N;
C: calcd, 68.97; found, 70.01.
1
UV (CH3OH) λmax 252 nm (log ꢀ 4.13); H NMR (DMSO-d6) δ
1.8 (3 H, s, CH3CO), 3.45-3.6 (2 H, m, 2H-C(1)), 3.75-3.85
(1 H, m, H-C(2)), 4.15-4.21 (1 H, m, H-C(3)), 4.56 (1 H, t, J
) 5.5 Hz, OH), 5.1 (1 H, d, J ) 5.3 Hz, OH), 6.27 (1 H, dd, J
) 16 and 6.3 Hz, H-C(4)), 6.52 (1 H, d, J ) 16 Hz, H-C(5)),
7.15-7.41 (5 H, m, arom.), 7.62 (1 H, d, J ) 8.7 Hz, NH); 13C
NMR (DMSO-d6) δ 22.9 (C-2′), 55.8 (C-2), 60.4 (C-1), 71.3 (C-
3), 126.3 (arom.), 127.3 (arom.), 128.6 (arom.), 129.5 (C-5),