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ACS Medicinal Chemistry Letters
The efficacy of 17 was then assessed in a mouse tumor
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The PDB deposition validation reports are also available as a
PDF.
xenograft model using a B-cell lymphoma line, JEKO-1,
which we have shown is sensitive to CBP/EP300 HAT
inhibition. 17 showed 67% TGI at a dose of 0.5 mg/kg PO
BID with concomitant reduction of H3K27Ac in plasma
and reduction of H3K18Ac in the tumor. These effects are
approximately equivalent to those observed with 3 when
dosed at 10 mg/kg BID PO (65% TGI). This represents a
20-fold improvement of in vivo activity for 17 relative to 3,
with an improved off-target profile. This improvement in in
vivo activity can mainly attributed to the improved potency,
permeability, and solubility of 17 relative to 3 (Figure 5).
AUTHOR INFORMATION
Corresponding Author
* Email: jonathan.wilson@constellationpharma.com
Present Addresses
a Piramal Enterprises Limited-Discovery Solutions
Ahmedabad, Gujarat, IN 382 213.
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b Foghorn Therapeutics, 100 Binney Street, Suite 610, Cambridge,
MA, USA 02142.
c Kymera Therapuetics, 300 Technology Square, Cambridge, MA,
USA 02142.
d Third Rock Ventures, 29 Newbury St #301, Boston, MA, USA
02116.
Author Contributions
The manuscript was written through contributions of all authors. /
All authors have given approval to the final version of the
manuscript.
ABBREVIATIONS
CBP, CREB binding protein; HAT, histone acetyltransferase;
AcCoA, acetyl coenzyme A; H3K27, histone 3 lysine 27; H3K18,
histone 3 lysine 18; HTS, high throughput screen; SAR, structure
activity relationship; SPA, scintillation proximity assay; MSD,
meso scale discovery; PAMPA, parallel artificial membrane
permeation assay; PPB, plasma protein binding; MLM, mouse
liver microsomes; PK, pharmacokinetics; hERG, human ether-à-
go-go-related gene or Kv 11.1; IV, intravenoues; PO, per os; TGI,
tumor growth inhibition.
REFERENCES
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(3) Farria, A.; Li, W.; Dent, S. Y. R. KATs in Cancer: Functions
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(4) Ghosh, A. K.; Varga, J. The Transcriptional Coactivator and
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(5) Ghizzoni, M.; Haisma, H. J.; Maarsingh, H.; Dekker, F. J.
Histone acetyltransferases are crucial regulators in NF-kB mediated
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Figure 5. Antitumor activity (top), H3K18Ac reduction in
tumor (bottom left), and H3K27Ac reduction in plasma
(bottom right) of 17 (orange) and 3 (blue) in a JEKO-1
xenograft model.
In summary, we have detailed the optimization of lead
indole compound 3 into the highly potent and selective
aminopyridine EP300/CBP HAT inhibitor CPI-1612, 17. A
wide variety of scaffold replacements for the indole were
surveyed, resulting in the discovery of the aminopyridine
core of 12. Further optimization led us to compound CPI-
1612 which is potent across a range of biochemical and
cellular assays that assess EP300/CBP HAT inhibition, has
good pharmacokinetic profiles in mice and dogs, and is
devoid of any significant off-target activity. Additionally,
CPI-1612 suppresses H3K27 acetylation in vivo and is
efficacious in a JEKO-1 mantle cell lymphoma xenograft at
a low dose.
ASSOCIATED CONTENT
Supporting Information
The Supporting Information is available free of charge on the
ACS Publications website.
(9) Yao, T. P.; Oh, S. P.; Fuchs, M.; Zhou, N. D.; Ch’ng, L. E.;
Newsome, D.; Bronson, R. T.; Li, E.; Livingston, D. M.; Eckner, R.
Gene Dosage–Dependent Embryonic Development and Proliferation
Defects in Mice Lacking the Transcriptional Integrator p300. Cell
1998, 93, 361-372.
The preparation of compounds 3-17, experimental details for in
vivo experiments and ADME experiments, and details for x-ray
crystallography of compounds 12 and 17 are available as a PDF.
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