1
714 J. Am. Chem. Soc., Vol. 118, No. 7, 1996
Deal et al.
1
0,13
for phosphoryl transfer reactions.
Measurement of the
The solvent deuterium isotope effect for the hydrolysis of 2 by 1
1
5
was determined. Reactions were performed in H O or 99.99% D O at
secondary N isotope effect on the alkaline hydrolysis of 3,3-
dimethylbutyl 4-nitrophenyl phosphate revealed about 50% bond
cleavage to the 4-nitrophenol leaving group in the transition
2
2
pH > 9.0, corresponding to the pH-independent region of the pH vs
14
rate profile, in order to eliminate any rate effect due to differences
between pH and pD.16 As a control, the reaction was run in CHES
10
state, corresponding to a concerted mechanism. Application
of the secondary 15N isotope effect to metal complex-promoted
hydrolysis of activated phosphate diesters will allow for the
determination of whether the loss of the leaving group is rate
limiting and, if so, will provide an estimate of the percentage
of bond cleavage in the transition state. This information will
improve our understanding of metal-mediated phosphodiester
hydrolysis.
D
buffer at pH ( 0.5 from the calculated pD, and the k was determined
to be constant. In a typical experiment, freshly prepared 1 stock (11
2 2
mM) in either H O or D O was added to a reaction mixture containing
5
0 mM CHES buffer (pH or pD > 9.1) in the same solvent and heated
to 50 °C in the spectrophotometer. A reference cuvette, identical in
all respects except lacking 1, was similarly prepared. Freshly prepared
2 stock (51 mM) in the appropriate solvent was added to the reaction
mixtures, and the mixtures were allowed to equilibrate for 5 min. The
reactions in D
2 2
O and H O were carried out in parallel under identical
conditions. The total reaction volume was 3.00 mL, the final
concentration of 1 was 1.17 mM, the final concentration of 2 was 2.57
4
mM, and the ionic strength was adjusted to 0.1 M with 5 M NaClO .
We have conducted detailed mechanistic studies of labile
metal complex-promoted activated phosphate diester hydrolysis.
Previously, we described the hydrolytic activity of Cu[9]aneN3-
14
1
5
Cl2 (1), an effective catalyst for phosphate diester hydrolysis.
Isotope Incorporation Determination. The 18O isotope incorpora-
In order to probe the mechanism in greater detail, a series of
isotope effect studies have been performed. To obtain informa-
tion on the source of the nucleophile, the solvent deuterium
isotope effect on the rate of 1-catalyzed phosphate diester
hydrolysis has been determined. To assist in the determination
of the rate-limiting step as well as to distinguish between a
pentacovalent phosphorane intermediate and a concerted mech-
tion in the hydrolysis of 2 by the catalyst derived from 1 was measured.
18
2
The reaction mixture consisted of 50 mM 2, 10 mM 1, and 30% OH ,
and the pH was held constant at 7.2 with 0.5 M HEPES. The solution
was heated at 70 °C in a heat block for 3 weeks, at which time the
reaction had reached about 40% completion, as determined by the
amount of 4-nitrophenolate formed. The 4-nitrophenol was isolated
by acidification followed by ether extraction. The ether layer was dried
over magnesium sulfate, and the ether was removed by rotary
anism, the secondary 15N isotope effect for the hydrolysis of
ethyl 4-nitrophenyl phosphate (2) by 1 has been measured. These
studies have enabled us to develop a more complete understand-
ing of the mechanism of metal-promoted hydrolysis.
evaporation. The resulting yellow residue of 4-nitrophenol was
1
dissolved in 400 µL of D
The D
-nitrophenol was submitted for high-resolution mass spectrometry to
2
O, and its identity was confirmed by H NMR.
2
O was removed by rotary evaporation, and the sample of
4
18
measure O incorporation.
Secondary 15N Isotope Effect Determination. The secondary 15
N
isotope effect for the hydrolysis of 2 by 1 was determined with the
natural abundance of nitrogen in the substrate by the method of Hengge
and Cleland.10 For these experiments, reactions involved isolation and
measurement of the 15N/ N ratio for 4-nitrophenol as described.
14
17
Specifically, the reaction mixture contained 5 mM 2, 1.25 mM 1, and
0 mL of 0.1 M HEPES buffer, pH adjusted to 7.2. The reaction
2
Experimental Methods
mixtures were heated and stirred at 70 °C in an oil bath. After the
reaction reached 40-60% completion, the reaction was stopped and
the amount of 4-nitrophenol produced was determined. The reaction
mixture was acidified with 1 M HCl and the 4-nitrophenol extracted
three times with distilled diethyl ether. The ether extracts were dried
over magnesium sulfate and concentrated to dryness. The aqueous
layer, containing the unreacted substrate as well as 1, was subjected to
rotary evaporation to remove dissolved ether. To prevent interference
with the 15N measurement, 1 was removed by passage through a 5 mL
Materials. The biological buffers HEPES (N-(2-hydroxyethyl)-
piperazine-N′-ethanesulfonic acid) and CHES (2-(N-cyclohexylamino)-
ethanesulfonic acid) were purchased from Sigma Chemical. Chelex
resin (sodium form) was also purchased from Sigma Chemical. The
18
isotopically labeled compounds D
2
O (99.99+%) and OH (60-65%)
2
were purchased from Cambridge Isotope Laboratories. All chemicals
were used without further purification. Anhydrous analytical grade
diethyl ether (Mallinckrodt) was distilled at 34-35 °C to remove higher
boiling impurities shortly before use. Sodium ethyl 4-nitrophenyl
phosphate and dichloro(1,4,7-triazacyclononane)copper(II) were pre-
Chelex column, and the column was washed with 20-25 mL of H O
2
to ensure recovery of all the unreacted substrate. The eluent was
hydrolyzed completely by the addition of enough NaOH to make a 1
M solution, followed by heating at 95 °C. Complete hydrolysis was
ensured by heating the basic solution for at least 30 h, which is 10
times the half-life for base hydrolysis at this pH and temperature. The
4-nitrophenol produced was isolated as before.
1
4
pared as described. All aqueous solutions were prepared with water
purified by passage through a Millipore purification system. The
1
4
instrumentation was as described.
Kinetic Procedures. The initial rate of production of 4-nitropheno-
late was monitored spectrophotometrically at 400 nm as described.14
All experiments were run in triplicate, and the data reported represent
the average of these experiments with less than 5% deviation among
the measurements.
The effect of temperature on the hydrolysis of 2 by the catalyst
derived from 1 was determined over the temperature range 30-90 °C.
Reactions were performed in 50 mM CHES buffer, the pH of the buffer
was adjusted to 9.1 at each reaction temperature, and the reaction
mixture contained 1.00 mM 1 and 10.0 mM 2. The ionic strength was
The purification and preparation of the 4-nitrophenol samples for
17
combustion was performed by the method of Cleland. Briefly, the
4
9
-nitrophenol residues were purified by sublimation under vacuum at
5 °C, and the sublimed product was transferred to a quartz tube by
rinsing with distilled diethyl ether. The ether was removed from the
tubes under vacuum, and the tubes were prepared for combustion by
the addition of a layer of CuO, a layer of copper metal, and a thin
piece of silver foil. The samples were combusted at 850 °C for 2 h,
then at 550 °C for 8 h before cooling to room temperature.
0
.1 M and was controlled with 5 M NaClO
4
. Reactions were prepared
in parallel to insure identical conditions of pH, concentration, and ionic
strength and were pre-equilibrated at the desired temperatures. Four
different temperatures were used: in one experiment, the actual
temperatures used were 32.0, 50.2, 65.3, and 84.0 °C. The measured
temperatures are accurate to (0.5 °C. To maintain a constant
temperature at 32 °C, an external ice bath was used to cool the water
circulator.
After combustion, the nitrogen gas was separated from the water
vapor and carbon dioxide on a high-vacuum line by selective trapping
of the latter two gases with dry ice/alcohol and liquid nitrogen traps,
respectively. The nitrogen gas was deposited onto molecular sieves
cooled with liquid nitrogen and then released from the molecular sieves
by heating to 200 °C for 15 min before transfer to the isotope ratio
mass spectrometer where the isotopic composition of the N
2
gas was
(
(
(
13) Cleland, W. W. FASEB J. 1990, 4, 2899-2905.
14) Deal, K. A.; Burstyn, J. N. Inorg. Chem., in press.
15) Burstyn, J. N.; Deal, K. A. Inorg. Chem. 1993, 32, 3585-3586.
(16) Glasoe, P. K.; Long, F. A. J. Phys. Chem. 1960, 64, 188-190.
(17) Cleland, W. W. Methods Enzymol. 1995, 249, 341-373.