A.S. Abdelsamie et al. / European Journal of Medicinal Chemistry xxx (2016) 1e14
11
Table 5
Binding affinities of selected compounds for the estrogen receptors
6.1.7. (3-Ethoxy-2,6-difluoro-phenyl)-(5-pyridin-4-yl-thiophen-2-
yl)-methanone (6a)
The title compound was prepared by reaction of (5-bromo-thi-
ophen-2-yl)-(3-ethoxy-2,6-difluoro-phenyl)-methanone (III)
a
and b.
Cmpd.
% Bindinga
Cmpd.
% Bindinga
ERab
ERbc
ERab
ERbc
(300 mg, 0.86 mmol), pyridine-3-boronic acid pinacol ester
(355 mg, 1.73 mmol), sodium carbonate (2.5 mL, 2 M) and tetra-
kis(triphenylphosphine) palladium (5 mmol) according to method
C2. The product was purified by CC (dichloromethane/methanol
99.5:0.5); yield: 91% (450 mg). The product was used in the next
step without any characterization.
11
13
18
20
0
4
6
55
8
21
24
25
26
37
51
17
8
11
69
22
0
44
73
27
a
Mean value of three determinations, standard deviation less than 15%.
b
c
c(ER
c(ER
a
b
) ¼ 1 nM, c(E2) ¼ 3 nM, c(test compound) ¼ 3
m
M.
m
) ¼ 4 nM, c(E2) ¼ 10 nM, c(test compound) ¼ 10
M.
6.1.8. (5-(3-Chloro-phenyl)-thiophen-2-yl)-(2,6-difluoro-3-
hydroxy-phenyl)-methanone (8)
The title compound was prepared by reaction of (5-bromo-thi-
100
75
ophen-2-yl)-(2,6-difluoro-3-hydroxy-phenyl)-methanone
(VII)
(430 mg, 1.35 mmol), 3-chlorophenylboronic acid (253 mg,
1.62 mmol), cesium carbonate (1756 mg, 5.39 mmol) and tetra-
kis(triphenylphosphine) palladium (5
C1. The product was purified by CC (hexane/ethyl acetate 90:10);
yield: 74% (350 mg). 1H NMR (500 MHz, acetone-d6)
9.02 (s, 1H,
mmol) according to method
50
d
OH), 7.84 (tt, J ¼ 2.4, 1.2 Hz, 1H), 7.78e7.76 (m, 1H), 7.69 (d,
J ¼ 4.1 Hz, 1H), 7.66 (dt, J ¼ 4.1, 0.9 Hz, 1H), 7.52 (td, J ¼ 7.9, 0.5 Hz,
1H), 7.47 (ddd, J ¼ 8.0, 2.0, 1.1 Hz, 1H), 7.23e7.21 (m, 1H), 7.06e7.04
25
s.c.dosing
(m, 1H); 13C NMR (125 MHz, acetone-d6)
d 180.77, 153.31, 152.56
(dd, J ¼ 240.6, 5.8 Hz), 148.44 (dd, J ¼ 245.9, 7.7 Hz), 143.92, 142.68
(dd, J ¼ 12.9, 3.2 Hz), 138.12, 135.80, 135.69, 131.92, 130.20, 126.96,
126.90, 125.81, 120.42 (dd, J ¼ 9.1, 3.9 Hz), 117.97 (dd, J ¼ 23.9,
19.7 Hz), 112.47 (d, J ¼ 22.8 Hz); MS (ESI): 351.63 (MþH)þ.
0
0
24 48 72 96 120 144 168 192
Time (h)
Fig. 3. Pharmacokinetic profile of compound 20 in Sprague-Dawley rats following
repetitive subcutaneous administration. Compound 20 was subcutaneously adminis-
6.1.9. 2-(3-Chloro-4-methoxy-5-methyl-phenyl)-4,4,5,5-
tered once-a-day at a dose of 150 mmol/kg body weight in 0.5% gelatin/5% mannitol in
water to three female Sprague-Dawley rats. Plasma samples were taken at 24 h, 48 h,
tetramethyl-(1,3,2)dioxaborolane (22a)
5-Bromo-1-chloro-2-methoxy-3-methylbenzene (22b) (5,00 g,
20,2 mmol, 1,00 equiv), bis(pinacolato)diboron (8,09 g, 31,8 mmol,
1,50 equiv), potassium acetate (5,95 g, 60,6 mmol, 3,00 equiv) and
1,10-Bis(diphenylphosphino)ferrocene-palladium(II)dichloride
(739 mg, 1,01 mmol, 0,05 equiv) were dissolved under N2 in 40 ml
dry DMSO and the mixture was stirred at 80 ꢁC for 2 h. The reaction
was quenched with water, diluted with diethyl ether and filtered
over celite. The phases were separated and the aqueous layer was
extracted two times with diethyl ether. The combined organic
layers were washed three times with water; one time with brine,
dried over MgSO4, filtered and concentrated under reduces pres-
sure. The crude product was purified by CC (hexane/ethyl acetate
85:15); yield: 88% (4.71 g). 1H NMR (500 MHz, acetone-d6)
72 h and 168 h. Arrows indicate the administration of compound 20 during the first
four days, immediately after plasma sampling. Data shown are the mean
three animals.
SEM of
(dichloromethane/methanol 99.75:0.25); yield: 41% (330 mg). 1H
NMR (500 MHz, acetone-d6)
d
8.77 (s, 1H), 7.94 (td, J ¼ 8.8, 6.3 Hz,
1H), 7.75 (dd, J ¼ 4.0, 1.1 Hz, 1H), 7.63 (dd, J ¼ 4.0, 1.0 Hz, 1H),
7.43e7.40 (m, 1H), 7.39e7.37 (m, 1H), 7.35 (ddd, J ¼ 2.5, 1.5, 0.5 Hz,
1H), 7.27e7.21 (m, 1H), 7.20e7.15 (m, 1H), 7.14 (ddd, J ¼ 7.7, 2.6,
1.5 Hz, 1H); 13C NMR (125 MHz, acetone-d6)
d 187.84, 163.90 (dd,
J ¼ 250.2,12.1 Hz),160.35 (dd, J ¼ 254.0,13.3 Hz),158.45,144.41 (dd,
J ¼ 91.1, 3.7 Hz), 140.16, 136.06, 131.44 (dd, J ¼ 9.9, 4.4 Hz), 130.63,
128.25e127.77 (m), 121.15, 120.39, 118.70 (dd, J ¼ 12.9, 4.1 Hz),
116.32, 113.36 (dd, J ¼ 21.8, 3.6 Hz), 105.70 (t, J ¼ 26.4 Hz); MS (ESI):
317.63 (MþH)þ.
d
7.54e7.56 (m, 1H), 7.48e7.50 (m, 1H), 3.82 (s, 3H), 2.31 (t,
J ¼ 0.6 Hz, 3H), 1.33 (s, 12H).
6.1.10. 2-(3-Bromomethyl-5-chloro-4-methoxy-phenyl)-4,4,5,5-
tetramethyl-(1,3,2)dioxaborolane (28b)
2-(3-Chloro-4-methoxy-5-methylphenyl)-4,4,5,5-tetramethyl-
1,3,2-dioxaborolane (22a) (200 mg, 0,71 mmol, 1,00 equiv) and N-
bromosuccinimide (113 mg, 0,63 mmol, 0,90 equiv) were dissolved
under N2 in 17 ml CCl4, followed by a catalytic amount of dibenzoyl
peroxide. The mixture was stirred under reflux for 1 h. The reaction
was quenched with water and extracted three times with
dichloromethane. The combined organic layers were washed two
times with water, one time with brine, dried over Na2SO4, filtered
and concentrated under reduced pressure. The crude product was
purified by CC (hexane/ethyl acetate 85:15); yield: 70% (180 mg). 1H
6.1.6. (5-(2,4-Difluoro-phenyl)-thiophen-2-yl)-(3-hydroxy-2-
methyl-phenyl)-methanone (2)
Compound 2a (430 mg, 1.16 mmol) in ethanol (5 ml) was
refluxed in 10% NaOH (15 mL) for 2 h on a water bath. The reaction
mixture was cooled, diluted with water and neutralized with acetic
acid. The product was purified by CC (dichloromethane/methanol
99.5:0.5); yield: 58% (220 mg). 1H NMR (500 MHz, acetone-d6)
d
9.51 (s, 1H, OH), 8.83 (dd, J ¼ 15.1, 8.5 Hz, 1H), 8.49 (d, J ¼ 3.4 Hz,
1H), 8.37 (d, J ¼ 3.4 Hz, 1H), 8.24e8.02 (m, 3H), 7.95 (d, J ¼ 7.9 Hz,
1H), 7.89 (d, J ¼ 7.3 Hz, 1H), 3.11 (s, 3H); 13C NMR (125 MHz,
NMR (500 MHz, acetone-d6)
J ¼ 1.5 Hz, 1H), 4.71 (s, 2H), 4.00 (s, 3H), 1.33e1.35 (m, 12H).
d
7.75 (d, J ¼ 1.5 Hz, 1H), 7.68 (d,
acetone-d6)
d
189.56, 163.02 (dd, J ¼ 251.3, 12.8 Hz), 159.45 (dd,
J ¼ 253.4, 12.4 Hz), 155.85, 144.44 (dd, J ¼ 10.1, 4.1 Hz), 140.21,
135.70, 130.55 (dd, J ¼ 9.9, 4.4 Hz), 127.34, 127.28, 126.11, 122.33,
118.97, 117.80 (dd, J ¼ 12.8, 4.0 Hz), 116.62, 112.45 (dd, J ¼ 21.8,
3.6 Hz), 104.79 (t, J ¼ 26.4 Hz), 11.99; MS (ESI): 331.04 (MþH)þ.
6.1.11. 1-(4-(3-Chloro-2-methoxy-5-(4,4,5,5-tetramethyl-(1,3,2)
dioxaborolan-2-yl)-benzyl)-piperazin-1-yl)-ethanone (28a)
2-(3-(Bromomethyl)-5-chloro-4-methoxyphenyl)-4,4,5,5-
Please cite this article in press as: A.S. Abdelsamie, et al., Treatment of estrogen-dependent diseases: Design, synthesis and profiling of a
selective 17 -HSD1 inhibitor with sub-nanomolar IC50 for a proof-of-principle study, European Journal of Medicinal Chemistry (2016),
b