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122
B.-M. Kukovec, Z. Popovic / Journal of Molecular Structure 930 (2009) 121–125
Table 1
TGA/DTA measurements were performed at heating rate of
10 °C minÀ1 in the temperature range of 25–600 °C, under nitrogen
flow of 10 mL minÀ1 on instrument Mettler-Toledo TGA/SDTA
851e. Approximately 10 mg of sample were placed in standard alu-
Crystal data and details of the structure determination for [Ni(6-Brpic)2(H2O)2]Á3H2O
(1) and [Ni(6-Brpic)2(H2O)2]ÁH2O (2).
Compound
1
2
minium crucible (40 lL).
Formula
Mr
C12H6NiBr2N2O9
540.68
C12H12NiBr2N2O7
514.73
Colour and habit
Crystal system, space group
Crystal dimensions (mm3)
Unit cell parameters:
a (Å)
Green, prism
Triclinic, P1
0.80 Â 0.18 Â 0.16
Green, block
Triclinic, P1
0.59 Â 0.48 Â 0.32
2.2. cis-diaquabis(6-bromopyridine-2-carboxylato-N,O)nickel(II)
trihydrate, [Ni(6-Brpic)2(H2O)2]Á3H2O, (1)
ꢀ
ꢀ
A solution of 6-bromopicolinic acid (0.05 g, 0.25 mmol) in
10 mL of water was added to a solution of nickel(II) nitrate hexahy-
drate (0.04 g, 0.14 mmol) in 5 mL of water. The pH value of the
resulting green solution was adjusted to 8 by adding a few drops
of concentrated ammonia solution and then left to stand at room
temperature for 3 weeks. The light green crystals were obtained
and filtered off, washed with small portion of water and dried in
vacuum. Yield: 0.04 g (50%). Anal. Calcd. for C12H16NiBr2N2O9
(550.79): C, 26.17; H, 2.93; N, 5.09%. Found: C, 26.21; H, 3.11; N
5.19%. IR data (KBr pellet, cmÀ1): 3344(m), 1643(s), 1586(s),
1555(s), 1441(m), 1404(m), 1377(s), 1248(w), 1159(w), 1128(m),
1083(w), 1003(w), 766(m), 746(m).
8.9359(3)
13.8752(9)
16.1480(11)
72.401(6)
78.756(4)
80.779(4)
1860.79(19)
0.71073
8.0378(2)
11.2015(3)
19.8394(5)
74.148(2)
79.170(2)
71.703(3)
1621.21(8)
0.71073
b (Å)
c (Å)
a
(°)
b (°)
c
(°)
V (Å3)
Radiation, MoKa (Å)
Z
4
4
Dcalc(g cmÀ3
)
1.966
5.385
2.109
6.164
l
(mmÀ1
)
h range for data collection (°)
h, k, l range
3.88–25.00
À10:10; À16:16,
À19:19
3.93–27.00
À10:10; À14:14,
À25:25
Scan type
x
x
No. measured reflections
No. independent reflections (Rint
33140
6517 (0.2339)
4754
35760
7028 (0.0424)
5043
2.3. cis-diaquabis(6-bromopyridine-2-carboxylato-N,O)nickel(II)
monohydrate, [Ni(6-Brpic)2(H2O)2]ÁH2O, (2)
)
No. observed reflections, I ꢀ2
r(I)
No. refined parameters
488
470
Ra, wRb [I ꢀ 2
r
(I)]
0.0683, 0.1293
0.1138, 0.1444
0.0535, 0.1738
1.112
0.0398, 0.1029
0.0638, 0.1089
0.0669, 0
1.048
A solution of 6-bromopicolinic acid (0.10 g, 0.50 mmol) in
15 mL of water was added to a solution of nickel(II) nitrate hexahy-
drate (0.07 g, 0.24 mmol) in 5 mL of water. The pH value of the
resulting green solution was adjusted to 8 by adding a few drops
of concentrated ammonia solution. The solution was left to stand
at room temperature for 1 week and then the light green crystals
of 1 were formed. The crystals of 1 were left to stand in mother li-
quor at room temperature for 2 months, resulting with the forma-
tion of dark green crystals of 2. These crystals were filtered off,
washed with small portion of water and dried in vacuum. Yield:
0.10 g (83%). Anal. Calcd. for C12H12NiBr2N2O7 (514.75): C, 28.00;
H, 2.35; N, 5.44%. Found: C, 28.14; H, 2.41; N 5.46%. IR data (KBr
pellet, cmÀ1): 3400(m), 1641(s), 1584(s), 1554(s), 1441(m),
1375(s), 1248(w), 1161(m), 1127(m), 1085(w), 1004(w), 779(m),
771(m), 742(m).
R, wR [all data]
g1, g2 in wc
Goodness of fit on F2, Sd
Max., min. electron density (e ÅÀ3
)
1.677, À1.125
1.398, À1.090
Maximum
D/r
0.001
0.001
Range of transmission factors min., 0.330, 0.420
max.
Extinction coefficient
0.035, 0.135
–
0.0125(6)
P
P
a
b
c
R = ||Fo| À |Fc||/ |Fo|.
P
P
wR = [ (Fo À Fc2)2/ w(Fo2)2]1/2
.
2
w = 1/[
r
2(Fo2) + (g1P)2 + g2P] where P = (Fo2 + 2Fc2)/3.
P
S = [w(Fo À Fc2)2/(Nobs À Nparam)]1/2
.
d
2
using SHELXL-97 DFIX instruction. The isotropic Uiso(H) value
was fixed at the same time [Uiso(H) = 1.2Ueq(O)].
Calculations were performed with SHELXS-97 [10], SHELXL-97
[10] and PLATON [11]. The molecular graphics were done with OR-
TEP-3 [12] and MERCURY (Version 1.4.2) [13].
2.4. X-ray single crystal structure determination
Crystal data and details of the structure determination for 1 and
2 are given in Table 1.
Suitable single crystals of 1 and 2 were selected and mounted in
air onto thin glass fibres. The data collection was carried out on
Oxford Diffraction Xcalibur four-circle kappa geometry diffractome-
ter with Xcalibur Sapphire 3 CCD detector by applying the CrysAlis
Software system, Version 171.32.24 at room temperature (296 K)
[9]. Data reduction has been applied by the same programme [9].
The X-ray diffraction data have been corrected for Lorentz-
polarization factor and scaled for absorption effects by multi-scan.
The structures were solved by direct methods. Refinement proce-
dure by full-matrix least squares methods based on F2 values
against all reflections has been performed including anisotropic
displacement parameters for all non-H atoms.
3. Results and discussion
3.1. Preparation of complexes
Complex [Ni(6-Brpic)2(H2O)2]Á3H2O (1) was prepared by reac-
tion of nickel(II) nitrate hexahydrate and 6-bromopicolinic acid
in aqueous solution in the presence of ammonia, at a pH value of
at least 8. Complex 1 cannot be prepared in acidic aqueous solu-
tions (without the addition of base e.g. ammonia).
Pseudopolymorph [Ni(6-Brpic)2(H2O)2]ÁH2O (2) was obtained by
spontaneous recrystallization of 1 in its mother liquor during
2 months. Two crystal water molecules are lost during this process,
leading to the formation of another pseudopolymorph, which
crystallizesina samecrystalsystemwithdifferentnumberofco-crys-
tallized water molecules (vide infra). Compound 1 appears as light
green prisms, it is not air-stable and decomposes in air due to the
release of co-crystallized water molecules. Compound 2 is air-stable
and appears as dark green blocks. Both compounds are soluble in
water, ethanol and in solvents with donor properties (N,N-dimethyl-
formamide, dimethylsulfoxide, pyridine and 4-picoline).
The positions of hydrogen atoms belonging to the carbon atoms
Csp2 were geometrically optimized applying the riding model
[Csp2–H, 0.93 Å; Uiso(H) = 1.2Ueq(C) for Csp2]. Hydrogen atoms
belonging to water molecules in 1 could not be found in difference
Fourier maps, probably due to the lower quality of the crystal and
the data collected. However, crystals of better quality could not be
prepared in spite of all our attempts. Atoms O16 and O17 from co-
crystallized water molecules in 1 are disordered. Hydrogen atoms
belonging to water molecules in 2 were found in difference Fourier
maps, the distance between them and the corresponding water
oxygen atoms was restrained to the average value of 0.82(3) Å