Communication
doi.org/10.1002/chem.202102176
Chemistry—A European Journal
the chemical antecedent to such linkages is cytidine-5’-mono-
We thus wondered what the binding properties of a cage
such as 6 would be in aqueous solution, in particular for anionic
carbohydrates like Neu5Ac. To this end, the solubility handles of
the ligands in 6 were replaced by guanidinium-terminating
[1,9]
phospho-β-Neu5Ac.
Unlinked Neu5Ac is predominantly
present as the β-anomer in solution and has a rich invivo
[1,10]
chemistry.
Molecules that can bind selectively to Neu5Ac
1
6+
and its derivatives might thus be exploited to understand,
monitor or intervene in a range of biological processes.
Inspiration for the development of Neu5Ac binders can be
drawn from selectins, a subclass of lectins (carbohydrate bind-
ing proteins). As is illustrated in Figure 1a for crystal structure
dendrons to make the [Pd L ]
cage 7 (Figure 1d). Herein, we
2
4
report that 7 has selective affinity for anionic sugars, particularly
for Neu5Ac, and that 7 has very low to no affinity for common
neutral mono- and disaccharides.
1
G1T (human E-selectin), there is a high degree of interaction
x [11]
complementarity in the binding mode with sLe . Notably, the Results and Discussion
anionic Neu5Ac fragment of sLe forms a salt-bridge with an
x
arginine residue and the galactose fragment has strong charge
assisted hydrogen bonds (HBs) with the same arginine residue
The synthesis of the ligand precursor to cage 7 (penta nitric
acid salt 13) is shown in Scheme 1. The starting trimesic
pentafluorophenyl (PFP) ester 8 and amine 9 were synthesized
(highlighted in magenta).
[19]
The beneficial effect of employing charge assisted HBs to
according to literature procedures and then coupled to each
bind sialic acid derivatives has been mimicked by the artificial
other to form bis-PFP ester 10 in 62% yield by using a
[12a]
[12b]
[15,19d]
receptors 2
and 3
shown in Figure 1b. The benzoborox-
previously reported protocol.
Subsequently, the remaining
ole-based receptor 2 can bind covalently to Neu5Ac with its
PFP esters of 10 were substituted by 3-aminopyridine to afford
[15]
borane part and binding is further enhanced by the presence of
11.
Deprotection of the Boc groups of 11 followed by
[12a]
the nearby guanidinium group.
Pyrenyl platform 3 was
basification and treatment with bis-boc-pyrazolocarboxamidine
[20]
intended to bind carbohydrates in water using CH···π inter-
afforded hexa-boc guanidine 12 in 69% yield. The desired
guanidinium ligand 13 could be obtained in 74% yield after
treatment of 12 with 1 M nitric acid in a water/1,4-dioxane
solvent mixture. The pyridyl rings in 13 could be selectively
deprotonated by the addition of two equivalents of sodium
hydroxide. The subsequent addition of a Pd(NO3)2 solution
actions and showed enhanced affinity for Neu5Ac when
1
[12b]
equipped with guanidinium-terminating dendrons (R ).
An-
other binding strategy is the use of covalent macrocyclic
compounds that can encapsulate a carbohydrate in aqueous
[13,16]
media.
[
13]
1
For example, macrocycle 4 (Figure 1c, left)
is highly
(0.55 eq.) gave cage 7 in a quantitative yield based on H NMR.
À 1
selective for GlcNAc-β-OMe (K �18,000 M
in water) by
[Note: As is detailed in Section S2 of the Supporting
a
encapsulating the carbohydrate by regular HBs and CH···π
However, such covalent macrocycles are not
selective for Neu5Ac or related anionic carbohydrates.
can be rationalized by the presence of anionic dendrimers (R )
used to solubilize the hydrophobic binding pockets.
[17]
interactions.
[
16c–e]
This
2
Contrarily, coordination cages based on a dipyridyl ligand
8
2+
2+
(
L) an a square planar d metal (M, for example Pd or Pt ) are
positively charged and are known to have affinity for anionic
[18]
guests. Another advantage of such coordination cages is the
reversibility of the pyridine-metal bond. This allows for non-
productive oligomerization products to become intermediates
towards the desired macrocycle, thus evading low-yielding
macrocyclization reactions needed in the synthesis of covalent
cages. Recently, two examples of coordination cages with the
4
+
structure [M L ]
have been reported with affinity for
As is exemplified in Figure 1c (right),
2
4
[
14–15]
carbohydrates.
4
+
[
Pt L ] cage 5 is based on dipyridyl ligands separated by
2 4
anthracene moieties. This cage bound selectively to D-sucrose
À 1
(
K �1,000 M ) by virtue of shape-complementarity and multi-
a
ple CH···π interactions between the carbohydrate and the
polyaromatic cavity of 5. A similar [M L ] cage was reported
[14]
4+
2
4
Scheme 1. Synthesis of cage 7 from ligand 13, prepared from previously
[15,19–20]
reported building blocks following (adjusted) literature protocols.
(
6 in Figure 1d) where the dipyridyl ligands are separated by
[15]
PFP=pentafluorophenyl, Boc=tert-Butyloxycarbonyl, Sol=guanidinium
solubilizing group. Conditions: i) N,N-diisopropylethylamine, 42 h at room
temperature (RT) in tetrahydrofuran; ii) 6 eq. 3-aminopyridine, 41 h at 100°C
isophtalamides, similar to macrocycle 4.
organic solubility handle and could be studied in CD Cl
containing 10% DMSO-d , where selectivity towards n-octyl-β-
Cage 6 had an
2
2
in pyridine; iii) 4 h at RT in 4 M HCl in dioxane/water; iv) neutralization with
6
À 1
À 1
NaOH and basification with NEt
3
; v) 6 eq. bis-Boc-pyrazolocarboxamide, 20 h
glucoside (K �51 M ) versus n-octyl-β-galactoside (K �29 M )
a
a
°
at RT (with dichloromethane); vi) 1 M HNO
3
, 22 h at 50 C in dioxane/water;
was observed.
vii) 2 eq. NaOH in D O;viii) 0.55 eq. Pd(NO ) in D O (see also Figure 2). See
2
3
2
2
Section S2 for experimental details and full characterizations.
Chem. Eur. J. 2021, 27, 1–7
2
© 2021 The Authors. Chemistry - A European Journal published by Wiley-VCH GmbH
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