İ. Gülçin, et al.
BioorganicChemistry103(2020)104171
2.1.4. 3-Imino-1-ethylsulfanyl-5,6,7,8-tetrahydro-3H-pyrrolo[1,2–a]
indole-2-carboxamide (3)
(10 mL) was heated (100 °C) and stirred at 100 °C for 30 min. After
cooling (70 °C), H2O (0.090 g, 5.0 mmol) and (NH2)2C = NH⋅HCl
(0.573 g, 6.0 mmol) were added to the reaction mixture and stirred at
70 °C for 0.5 h. Then KOH⋅0·.5H2O (0.325 mg, 5.0 mmol) was added
and the mixture was stirred at 70 °C for 30 min. The reaction mixture,
after cooling at room temperature, was diluted with H2O (15 mL),
neutralized with NH4Cl and was extracted with CHCl3 (10 mL × 4).
The organic extract was washed with H2O (5 mL × 3) and dried
(MgSO4). CHCl3 was evaporated in vacuum and the residue was pur-
ified by column chromatography (Al2O3, eluent C6H6/Et2O with gra-
dient from 1:0 to 10:1). 4-Benzyl-6-(thiophen-2-yl)pyrimidin-2-amine
was isolated as a cream solid (0.401 g, 30% yield); m.p. 180–185 °C;
elemental analysis calcd (%) for C15H13N3S (267.35): C 67.39%; H
4.90%; N 15.72%; S 11.99%; found: C 67.37%; H 4.91%; N 15.62%; S
11.94%. IR (film): νmax 3485, 3289, 3166, 3100, 3083, 3028, 2920,
1622, 1573, 1556, 1548, 1518, 1494, 1459, 1446, 1416, 1366, 1342,
1227, 1194, 1172, 1074, 1044, 1030, 908, 862, 839, 826, 791, 736,
728, 707, 622, 608, 577, 568, 520 cm−1; 1H NMR (400.1 MHz, CDCl3):
δ 3.93 (s, 2H, CH2Ph), 5.05 (br.s, 2H, NH2), 6.72 (s, 1H, H5), 7.06 (dd,
J = 3.8, 5.0 Hz, 1H, H9), 7.20–7.42 (m, 5H, Ho,m,p), 7.41 (d, J = 5.0 Hz,
1H, H10), 7.57 (d, J = 3.8 Hz, 1H, H8) ppm; 13C NMR (100.6 MHz,
CDCl3): δ 44.2 (CH2Ph), 105.4 (C5), 126.8 (Cp), 127.0 (C8), 128.1 (C9),
128.7 (Cm), 129.2 (C10), 129.3 (Co), 138.0 (Ci), 143.0 (C7), 160.3 (C6),
163.2 (C4), 170.9 (C2) ppm; 15N NMR (40.5 MHz, CDCl3): δ –136.6
(N3), –148.3 (N1), –305.6 (NH2) ppm.
Solution of 2-cyano-3-(ethylsulfanyl)-3-(4,5,6,7-tetrahydro-1H-
indol-2-yl)acrylamide (0.55 g, 2 mmol) in methanol (10 mL) is heated
in the presence of triethylamine (2–3 drops) for 10 h and cooled to
room temperature. The crystals formed are filtered off, washed with
diethyl ether and dried to afford 3-imino-1-ethylsulfanyl-5,6,7,8-tetra-
hydro-3H-pyrrolo[1,2–a]indole-2-carboxamide (0.25 g, 46%), mp
1
190–192 °C. H NMR (CDCl3-d3): 8.51 (br s, 1H, CONH2), 7.76 (br s,
1H, =NH), 6.16 (s, 1H, pyrrole), 5.42 (br s, 1H, CONH2), 3.19 (q,
J = 7.2 Hz, SCH2), 2.72–2.70 (m, 2H, CH2-7), 2.47–2.45 (m, 2H, CH2-
4), 1.90–1.88 (m, 2H, CH2-5), 1.78–1.76 (m, 2H, CH2-6), 1.43 (t,
J = 7.2 Hz, Me). 13C NMR (CDCl3-d3): 165.15 (CO), 157.79 (C-1),
155.58 (C-3), 131.21 (C-4), 129.45 (C-7), 125.93 (C-5), 113.91 (C-6),
112.76 (C-2), 26.2 (SCH2), 22.9, 22.7, 22.2, 22.1 (CH2-4–7), 14.3
(SCH2Me).
2.1.5. Tris(2-pyridyl)phosphine sulfide (4)
Tris(2-pyridyl)phosphine (0.521 g, 2 mmol) was dissolved in di-
chloromethane (10 mL) and elemental selenium was added (0.155 g,
2.01 mmol) at room temperature. The reaction mixture was stirred. The
reaction was completed in 2 h with higher yield. The solution was fil-
tered and solvent removed. The white crystalline product was crystal-
lized from ethanol, and dried on air. The purity of the tri(2-pyridyl)
phosphine selenide was checked by IR, 1H, 13C, 31P, 77Se NMR spectra
and melting point. Yield 95%, m.p. 175 °C; lit. 176–178 °C (EtOH).
Found: C, 52.3; H, 3.5; N, 12.5; P, 9.1; Se, 22.9%. Anal. Calcd. for:
2.2. Biochemical studies
C
15H12N3PSe. C, 52.3; H, 3.5; N, 12.2; P, 9.0; Se, 22.9%. 1H NMR
3
(400 MHz, CDCl3), δ ppm: 7.31 (dddd 3H, JHH = 7.8 Hz,
3JHH = 4.7 Hz, 3JHH = 3.1 Hz, 4JHH = 1.2 Hz, H5 Py), 7.79 tdd (3H, H4-
Py, 3JHH = 7.8 Hz, 3JHH = 4.7 Hz, 4JHH = 1.8 Hz), 8.30 ddd (3H, H3-
Py, 3JHH = 7.8 Hz, 3JHP = 6.8 Hz, 4JHH = 1.2 Hz), 8.69 br.d (3H, H6-
Py, 3JHH = 4.8 Hz). 13C NMR (100.62 MHz, CDCl3): δ = 124.88 (C5-Py,
2.2.1. Carbonic anhydrase purification studies
In this work, both hCA I, and II isoenzymes were purified
by Sepharose-4B-L-Tyrosine-sulfanilamide affinity chromatography
[60,61]. Sepharose-4B-L-Tyrosine-sulfanilamide was used as an affinity
matrix for selective retention of both hCA isoenzymes [62–64]. Both
hCA isoenzymes activity was spectrophotometrically determined ac-
cording to previous method described in details [65,66]. p-Ni-
trophenylacetate (PNA) was used as substrate and transformed to p-
nitrophenolate ions (PNP) [67]. One CA isoenzyme unit is accepted as
PNP over a period of 3 min at 25 °C [68,69].
4JPC = 3.2 Hz), 129.22 (C3-Py, JPC = 26.0 Hz), 136.17 (C4-Py,
2
3
3JPC = 10.5 Hz), 149.86 (C6-Py, JPC = 19.0 Hz), 154.12 (C2-Py,
1JPC = 106.0 Hz). 31P NMR (161.98 MHz, CDCl3): δ = 30.13 ppm,
(1JPSe = 732.6 Hz). 77Se NMR (77.0 MHz, CDCl3): δ = -307.2 ppm,
(1JPSe = 746.5 Hz). IR (KBr pellet, cm−1): 3063, 1566, 1449, 1420,
1282, 1124, 1050, 985, 772, 734, 560, 505, 450.
After affinity chromatography, the tubes containing the enzyme
were identified at 280 nm [70]. The protein quantity was spectro-
photometrically determined at 595 nm according to the Bradford
method [71]. During the purification steps, bovine serum albumin was
determined the two different acrylamides concentration. It was carried
out in 10 and 3% acrylamides for the running and the stacking gel,
respectively, containing 0.1% sodium dodecyl sulphate (SDS) according
to Laemmli procedure [73] as described in previous studies [74,75].
2.1.6. Tris(2-pyridyl)phosphine selenide (5)
Tris(2-pyridyl)phosphine (0.521 g, 2 mmol) was dissolved in di-
chloromethane (10 mL) and elemental sulfur was added (0.064 g,
2.01 mmol) at room temperature. The reaction mixture was stirred. The
reaction was completed in 2 h with higher yield. The solution was fil-
tered and solvent removed. The white crystalline product was crystal-
lized from isopropanol, and dried on air. The purity of the tri(2-pyridyl)
phosphine sulfide was checked by IR, 1H, 13C, 31P NMR spectra and
melting point. Yield 95%, m.p. 158–160 °C (isoPrOH); Yield 95%, lit.
160 °C (CHCl3) [2]. Found: C, 60.7; H, 4.0; N, 14.3; P, 19.1; S, 10.9%.
Anal. Calcd. for: C15H12N3PS. C, 60.6; H, 4.1; N, 14.1; P, 19.4; S, 10.8%.
2.2.2. Cholinesterases assays
AChE from electric eel (Electrophorus electricus) and BChE from
equine serum inhibitory effects of nitrogen, phosphorus, selenium and
sulfur-containing heterocyclic compounds (1–6) were measured by
slightly modifying the colorimetric Ellman’s method [76] as described
matic reactions. Additionally, 5,5-dithiobis(2-nitro-benzoic acid)
(DTNB) was used as common substrate for the determination of the
AChE and BChE activities. Briefly, 1 mL of Tris/HCl buffer (pH 8.0,
1.0 M) and 10 μL of sample solution at different concentrations were
dissolved in deionized water. Then, an aliquot AChE or BChE enzymes
(50 μL) was mixed and incubated at room temperature for 10 min. After
incubation period, an aliquot of DTNB (50 μL, 0.5 mM) was added.
Then, the reaction was allowed to start by the addition of 50 μL of AChI
or BChI (10 mM). The breakdown of these substrates was monitored
spectrophotometrically by yellow color formation of 5-thio-2-
1H NMR (400 MHz, CDCl3), δ ppm: 7.32 (dddd 3H, JHH = 7.8 Hz,
3
3JHH = 4.8 Hz, 4JHH = 1.2 Hz, 5JHH = 2.9 Hz, H5 Py), 7.77 tdd (3H, H4-
Py, 3JHH = 7.8 Hz, 4JPH = 4.6 Hz, 4JHH = 1.7 Hz), 8.25 ddd (3H, H3–
Py, 3JHH = 7.8 Hz, 3JHP = 6.5 Hz, 4JHH = 1.0 Hz), 8.70 br. d (3H, H6-
Py, 3JHH = 4.8 Hz). 13C NMR (100.62 MHz, CDCl3), δ: 124.90 (C5- Py,
2
4JPC = 3.3 Hz), 128.56 (C3– Py, JPC = 25.0 Hz), 136.04 (C4-Py,
3
3JPC = 10.2 Hz), 149.87 (C6-Py, JPC = 19.3 Hz), 155.05 (C2– Py,
1JPC = 114.6 Hz). 31P NMR (161.98 MHz, CDCl3): δ = 34.8 ppm. IR
(KBr pellet, cm−1): 3037, 2986, 1571, 1449, 1419, 1279, 1235, 1208,
1161, 1051, 1131, 1085, 1042, 987, 774, 742, 731, 661, 614, 549, 519,
473, 438, 394.
2.1.7. 4-Benzyl-6-(thiophen-2-yl)pyrimidin-2-amine (6)
A mixture of 2-acethylthiophene (0.631 g, 5.0 mmol), phenylace-
tylene (0.510 g, 5.0 mmol), and KOBut (0.673 g, 6.0 mmol) in DMSO
3