C-4¢), 67.60 (d, 2J (C, P) = 4.8 Hz, C-5¢), 55.73 (d, 2J(C, P) = 18.1 Hz,
-CHCOOH), 53.98 (d, 2J (C, P) = 4.8 Hz, POCH3), 33.87 (d, 1J(C,
151,85 (C-2T), 137.87 (C-6), 134.05 (C-2¢), 124.81 (C-3¢), 111.10
(C-5), 89.50 (C-1¢), 85.70 (C-4¢, J = 9.65 Hz), 64.52 (C-5¢), 46.30
3
P) = 130.5 Hz, J(C, P) = 7.5 Hz, -CH2PO3), 14.21 (CH3); 31P
(Et3N+), 39.70 (CHa), 34.75 (CH2b), 11.13, 7.86 (Et3N+) ppm. 31
P
NMR (202 MHz, D2O): d 22.0 (-CH2PO3), 6.10 (N-PO3); HRMS
NMR (D2O, 121 MHz): d 6.34 ppm. HRMS (negative ionization):
for C14H21N3O11P2 (M-H)- calcd: 468.0578, found: 468.0600.
calculated for C14H17N3O10P-: 418.0657, found: 418.0659.
2¢,3¢-Dideoxy-2¢,3¢-didehydrothymidine-5¢-(dimethyliminodiace-
tate)phosphoramidate triethylammonium salt (10, intermediate for
compound 4. The protocol for the synthesis of 10 is identical
to the previously described method for the synthesis of the
phosphoramidate (9) using a solution of dimethyl iminodiacetic
acid hydrochloride (434 mg, 2.2 mmol, 10 eq.) and n-tributylamine
(500 mL, 30 eq.) in dried DMF (2.2 mL) in the second step. The
corresponding compound 10 (74 mg, colourless solid, yield 76%)
was obtained and stored at -20 ◦C.
General procedure for synthesis of intermediates 9, 10 and
compounds 3, 4: 2¢,3¢-dideoxy-2¢,3¢-didehydrothymidine-5¢-
(dimethyl-L-aspartate)phosphoramidate triethylammonium salt
(9, intermediate for compound 3)
All solids were dried in a desiccator under high vacuum one day
prior to reaction. The nucleoside (50 mg, 0.22 mmol) was placed
under argon atmosphere and dissolved in trimethylphosphate (500
mL, 50 mL/10 mg nucleoside). Upon cooling down to 0 ◦C,
phosphorous trichloride (42 mL, 0.44 mmol, 2 eq.) was added
slowly via syringe. The resulting solution was stirred for 3 h at
0 ◦C and the reaction was monitored by TLC (i-PrOH/NH3/H2O
6 : 3 : 1, v/v). Upon total conversion of the starting nucleoside,
a solution of dimethyl L-aspartic acid hydrochloride (434 mg,
2.2 mmol, 10 eq.) and n-tributylamine (500 mL, 30 eq.) in dried
DMF (2.2 mL) was added via syringe. The resulting mixture was
stirred vigorously for 3 min and pipetted into a cold TEAB 1 M
solution (5 mL). The resulting clear mixture was further stirred
at room temperature for 30 min. Upon completion, all volatiles
were evaporated under high vacuum. The product was purified
by flash chromatography using a gradient of methanol and water
in chloroform (5 : 1 : 0, 5 : 2 : 0.25, 5 : 3 : 0.5). The corresponding
fractions were evaporated, lyophilized and the final compound
(70 mg, colourless solid, yield 73%) was stored at -20 ◦C.
TLC (i-PrOH/NH3/H2O 6 : 3 : 1, v/v) Rf 0.50; 1H NMR (D2O,
300 MHz): d 7.52 (s, 1H, H-6), 6.85 (s, 1H, H-1¢), 6.39 (s, 1H,
J = 5.97 Hz, H-2¢), 5.83 (s, 1H, J = 5.58 Hz, H-3¢), 4.95 (bs,
1H, H-4¢), 3.80–3.60 (m, 5H, H-5¢ and 2 ¥ CH2), 3.57 (bs, 6H,
CH3-O), 3.11 (q, 6H, N-CH2-CH3, Et3N+), 1.82 (s, 3H, CH3) 1.19
(t, 9H, N-CH2-CH3, Et3N+) ppm. 13C NMR (D2O, 126 MHz): d
173.83 (2 ¥ CO Ac), 166.62 (C-4T), 152.144 (C-2T), 138.44 (C-
6), 134.62 (C-2¢), 124.73 (C-3¢), 111.06 (C-5¢), 89.70 (C-1¢), 85.85
(C-4¢, J = 10.5 HZ), 64.85 (C-5¢), 52.13 (CH2 IDA), 48.69 (CH3-
O), 46.58 (Et3N+), 11.37, 8.16 (Et3N+) ppm. 31P NMR (D2O, 121
MHz): d 6.45 ppm. HRMS (negative ionization): calculated for
C16H21N3O10P-: 446.0970, found: 446.0976.
2¢,3¢-Dideoxy-2¢,3¢-didehydrothymidine-5¢-iminodiacetate phos-
phoramidate triethylammonium salt (4). The deprotection of
compound 10 (74 mg) is carried out in the same way as the
deprotection of 9. The final compound 4 was obtained as a white
solid (yield 51–60%) and stored at -20 ◦C.
TLC (i-PrOH/NH3/H2O 6 : 3 : 1, v/v) Rf 0.77; 1H NMR (D2O,
300 MHz): d 7.56 (s, 1H, H-6), 6.89 (s, 1H, H-1¢), 6.41 (s, 1H, J =
5.97 Hz, H-2¢), 5.86 (s, 1H, J = 5.37 Hz, H-3¢), 5.00 (bs, 1H, H-4¢),
3.97 (m, 1H, Ha), 3.88 (bs, 2H, H-5¢), 3.70, 3.65 (2 s, 2 ¥ 3H, CH3-
O), 3.13 (q, 6H, N-CH2-CH3, Et3N+), 2.72–2.70 (m, 2H, Hb), 1.83
(s, 3H, CH3), 1.21 (t, 9H, N-CH2-CH3, Et3N+) ppm. 13C NMR
(D2O, 75 MHz): d 173.04 (CO Asp 2x), 166.57 (C-4T), 152.16
(C-2T), 138.19 (C-6), 134.05 (C-2¢), 125.24 (C-3¢), 111.25 (C-5¢),
89.75 (C-1¢), 85.58 (C-4¢, J = 8.71 Hz), 64.71 (C-5¢), 52.80 (CH3-
O), 50.93 (CH3-O), 43.21 (Et3N+), 38.20 (CHa), 35.48 (CHb), 11.27
(CH3-T), 8.14 (Et3N+) ppm. 31P NMR (D2O, 121 MHz): d 5.59
ppm. HRMS (negative ionization): calculated for C16H21N3O10P-:
446.0970, found: 446.0966.
1H NMR (D2O, 300 MHz): d 7.51 (s, 1H, H-6), 6.85 (s, 1H,
H-1¢), 6.38 (s, 1H, J = 6.18 Hz, H-2¢), 5.84 (s, 1H, J = 5.58 Hz,
H-3¢), 4.97 (bs, 1H, H-4¢), 3.91–3.88 (m, 5H, H-5¢), 3.67, 3.64 (2 s,
4H, 2 ¥ CH2), 3.11 (q, 6H, N-CH2-CH3, Et3N+), 1.81 (s, 3H, CH3),
1.19 (t, 9H, N-CH2-CH3, Et3N+) ppm. 13C NMR (D2O, 151 MHz):
d 178.91 (2 ¥ CO Ac), 166.42 (C-4), 151.94 (C-2), 137.88 (C-6),
134.00 (C-2¢), 124.81 (C-3¢), 111.14 (C-5¢), 89.62 (C-1¢), 85.60 (C-
4¢, J = 9.50 Hz), 64.92 (C-5¢), 52.96 (CH2 IDA), 46.37 (Et3N+),
11.16, 8.10 (Et3N+) ppm. 31P NMR (D2O, 121 MHz): d 6.97
ppm. HRMS (negative ionization): calculated for C14H17N3O10P-:
418.0657, found: 418.0663.
2¢,3¢-Dideoxy-2¢,3¢-didehydrothymidine-5¢-(L-aspartyl)phospho-
ramidate triethylammonium salt (3). The previously prepared
compound (70 mg) was dissolved in 0.4 M sodium hydroxide
solution in water : methanol 2 : 1 (1 mL) and stirred at room
temperature until complete deprotection was achieved. Solvents
were evaporated and the residue was submitted to preparative
ion exchange chromatography (Source 15Q, Pharmacia) running
a gradient of TEAB in water (0 to 30% in 15 min). The final
compound was obtained as a white solid (yield 51–64%) and stored
at -20 ◦C.
2¢,3¢-Dideoxy-2¢,3¢-didehydrothymidine-5¢-(phenyl dimethyl-imi-
nodiacetate phosphate) (5). In a dry flask, iminodiacetate
methylester hydrochloride (0.99 g, 5 mmol) and dry CH2Cl2
(37.5 mL) were added and cooled to - 78 ◦C. Then phenyl
dichlorophosphate (1.05 g, 0.74 mL, 5 mmol) was added into
◦
the flask. The reaction mixture were stirred and kept at -78 C.
Anhydrous triethylamine (2.1 mL, 15 mmol) was added dropwise
◦
at - 78 C. After 15 min, the reaction mixture was left to warm
up to room temperature and stirred overnight. The formation
of the phosphonochloridate was monitored by 31P NMR and an
additional portion of triethylamine (2.1 mL, 15 mmol) was added
to the reaction mixture and the contents were allowed to stir.
After stirring at room temperature for 2 h, d4T (0.45 g, 2.0 mmol)
was added to the above reaction flask and the reaction mixture was
stirred at room temperature for 5 days. The suspension was filtered
1H NMR (D2O, 300 MHz): d 7.58 (s, 1H, H-6), 6.88 (s, 1H, H-
1¢), 6.39 (s, 1H, J = 6.09 Hz, H-2¢), 5.84 (s, 1H, J = 6.06 Hz, H-3¢),
5.00 (bs, 1H, H-4¢), 3.90 (bs, 2H, H-5¢), 3.70–3.67 (m, 1H, Ha),
3.14 (q, 6H, N-CH2-CH3, Et3N+), 2.61–2.58 (m, 2H, Hb), 1.83 (s,
3H, CH3), 1.21 (t, 9H, N-CH2-CH3, Et3N+) ppm. 13C NMR (D2O,
125 MHz): d 178.24 (CO Asp), 176.08 (CO Asp), 166.32 (C-4T),
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