Che-Wei Chang et al.
N2 for 30 min. 1-iodohexane (890 mg, 4.20 mmol) was then
2.2 Synthesis and characterization
added and the resulting mixture was stirred for 6 h. The
resulting mixture was diluted with 75 mL of water and
2.2a Synthesis of 5 and 6: Compound 7 (1.0 g, 1.8 mmol),
CAN (4.8 g, 8.8 mmol), nitric acid (8.0 g, 131.1 mmol) and extracted with CH2Cl2. The crude product was purified
dichloromethane (250 mL) were stirred at 25◦C under N2
for 48 h. The mixture was neutralized with 10% KOH and
extracted with CH2Cl2. After the solvent was removed, the
crude product was purified by silica gel column chroma-
tography with eluent CH2Cl2 to afford a mixture of 1,6-
and 1,7-dinitroperylene bisimides, and 1H-NMR (400 MHz)
analysis revealed a 1:3 ratio. Separation of the 1,6 and
1,7 isomers was performed on a preparative HPLC sys-
tem equipped with a refractive index detector and fitted
with a macro-HPLC column (Si, 8 μm, 250 × 22 mm). The
eluent was 8:1 hexane/ethyl acetate flowing at 12 mL/min.
Two fractions were collected from the column; the first was
pure 1,6-isomer (Rf = 0.42, 242 mg, yield = 21%), and the
second was pure 1,7-isomer (Rf = 0.38, 682 mg, yield =
59%). Characterization data: 5: 1H NMR (400 MHz, CDCl3)
δ 8.78 (2H, s), 8.63 (2H, d, J = 8.0 Hz), 8.30 (2H, d, J =
8.0 Hz), 5.01 (2H, m), 2.52 (4H, m), 1.90 (4H, m), 1.74 (6H,
m), 1.46 (4H, m), 1.36 (2H, m); MS (FAB): m/z (relative
intensity) 645 [M+H+, 100]; HRMS calcd. for C36H29O8N4
by silica gel column chromatography with eluent ethyl
acetate/n-hexane (1/2) to afford 1 (2) in 85% (82%) yield.
1
Characterization data for 1: H NMR (400 MHz, CDCl3) δ
9.40 (d, J = 8.0 Hz, 2H), 8.55 (d, J = 8.0 Hz, 2H), 8.32 (s,
2H), 5.06, (m, 2H), 3.35 (m, 4H), 3.01 (m, 4H), 2.57 (m, 4H),
1.90 (m, 4H), 1.15–1.77 (m, 44H), 0.78 (t, J = 6.4 Hz, 12H);
13C NMR (100 MHz, CDCl3) δ 164.5, 164.3, 151.0, 135.8,
131.9, 130.9, 128.9, 128.0, 123.7, 123.2, 123.1, 123.0, 120.3,
54.0, 53.6, 52.8, 31.5, 29.2, 29.1, 27.3, 26.9, 26.6, 25.5, 22.5,
13.9; MS (FAB): m/z (relative intensity) 921 (M+H+, 100);
HRMS calcd. for C60H81O4N4 921.6256, found 921.6247.
Purple parallelepiped-shaped crystals suitable for the crystal-
lographic studies reported here were isolated over a period
of six weeks by slow evaporation from a dichloromethane
solution. Selected data for 2: 1H NMR (400 MHz, CDCl3) δ
9.21 (d, J = 8.0 Hz, 2H), 8.45 (s, 2H), 8.38 (d, J = 8.0 Hz,
2H), 5.03, (m, 2H), 3.45 (m, 4H), 3.15 (m, 4H), 2.57 (m,
4H), 1.87 (m, 4H), 1.15–1.75 (m, 44H), 0.82 (t, J = 6.4 Hz,
12H); 13C NMR (100 MHz, CDCl3) δ 164.5, 164.2, 148.5,
135.4, 130.3, 128.2, 125.3, 124.3, 122.9, 122.7, 122.6, 121.1,
53.8, 52.5, 31.4, 29.1, 27.5, 26.9, 26.6, 25.5, 22.5, 13.9; MS
(FAB): m/z (relative intensity) 921 (M+H+, 100); HRMS
calcd. for C60H81O4N4 921.6256, found 921.6250.
1
645.1985, found 645.1983. Selected data for 6: H NMR
(400 MHz, CDCl3) δ 8.78 (2H, s), 8.68 (2H, d, J = 8.4
Hz), 8.28 (2H, d, J = 8.4 Hz), 5.01 (2H, m), 2.51 (4H, m),
1.92 (4H, m), 1.74 (6H, m), 1.46 (4H, m), 1.36 (2H, m); MS
(FAB): m/z (relative intensity) 645 [M+H+, 100]; HRMS
calcd. for C36H29O8N4 645.1985, found 645.1977.
2.2d Crystal structural determination: A single crystal of
1 with dimensions of 0.35 mm × 0.33 mm × 0.08 mm was
selected. The lattice constants and diffraction intensities were
measured with a Bruker Smart 1000CCD area detector radi-
ation (λ = 0.71073 Å) at 156(2) K. An ω-2θ scan mode was
2.2b Synthesis of 3 and 4: Tin(II) chloride dihydrate
(1.0 g, 4.8 mmol), 1,6- or 1,7-dinitroperylene diimides (0.5 g,
0.8 mmol) were suspended in THF (50 mL), and stirred at used for data collection in the range of 3.02 ≤ θ ≤ 26.45◦.
25◦C under N2 for 20 min. The solvent was refluxed 80◦C
with stirring for 6 h. THF was removed at the rotary evap-
orator, and the residue was dissolved in ethyl acetate and
washed with 10% sodium hydroxide solution and brine. The
organic layer was dried over anhydrous MgSO4 and the fil-
trate was concentrated under reduced pressure. The crude
product was purified by silica gel column chromatography
with eluent ethyl acetate/n-hexane (4/5) to afford 3 (4) in
A total of 77973 reflections were collected and 10645 were
independent (Rint = 0.0595), of which 6504 were considered
to be observed with I > 2σ(I) and used in the succeeding
refinement. The structure was solved by direct methods
with SHELXS-9734 and refined on F2 by full-matrix least-
squares procedure with Bruker SHELXL-97 packing.35 All
non-hydrogen atoms were refined with anisotropic thermal
parameters. The hydrogen atoms refined with riding model
position parameters isotropically were located from dif-
ference Fourier map and added theoretically. At the final
cycle of refinement, R = 0.1001 and wR = 0.2669 (w =
1
80% (82%) yield. Characterization data: 3: H NMR (400
MHz, CDCl3) δ 8.77 (2H, d, J = 8.0 Hz), 8.51 (2H, d,
J = 8.0 Hz), 7.85 (2H, s), 5.05 (2H, m), 4.98 (4H, s), 2.59
(4H, m), 1.92 (4H, m), 1.76 (6H, m), 1.27–1.56 (6H, m);
MS (FAB): m/z (relative intensity) 585 [M+H+, 100];
HRMS calcd. for C36H33O4N4 585.2502, found 585.
2508. Selected data for 4: 1H NMR (400 MHz, CDCl3)
δ 8.90 (2H, d, J = 8.0 Hz), 8.25 (2H, d, J = 8.0 Hz),
8.14 (2H, s), 5.04, (2H, m), 4.94 (4H, s), 2.61 (4H, m),
1.93 (4H, m), 1.74 (6H, m), 1.36–1.54 (6H, m); MS (FAB):
m/z (relative intensity) 585 (M+H+, 100); HRMS calcd. for
C36H33O4N4 585.2502, found 585.2504.
1/[σ2(Fo2) + (0.1983P)2 + 2.9730P], where P = (Fo2
+
2Fc2)/3). S = 1.078, (ꢀ/σ)max = 0.001, (ꢀ/ρ)max = 0.726
and (ꢀ/ρ)min = −1.159 e/Å3. Crystallographic data for the
structural reported in this article have been deposited with
the Cambridge Crystallographic Data Center as supplemen-
tary publication number CCDC 1486032. Copies of these
information can be obtained free of charge from the Direc-
tor, CCDC, 12 Union Road, Cambridge CB2 1EZ, UK (fax:
+44 1223 336 033; e-mail: deposit@ccdc.cam.ac.uk).
2.3 Computational methods
2.2c Synthesis of 1 and 2: A mixture of solution of 3
or 4 (410 mg, 0.70 mmol), sodium hydride (97%, 200 mg, The Gaussian 03 program was used to perform the ab
8.00 mmol) and dry THF (25 mL) was stirred at 0◦C under initio calculation on the molecular structure.36 Geometry