Dimeric 2,2Ј-Bipyridylruthenium(II) Complexes
FULL PAPER
1
(C36H18N8 requires 563). H NMR (CDCl3): 9.29 (d, J ϭ 7.5 Hz,
2 H), 9.17 (d, J ϭ 5 Hz, 2 H), 8.65 (dd, 2 H, J1 ϭ 5.5, J2 ϭ12 Hz),
8.31 (d, J ϭ 8.5 Hz, 2 H), 8.24 (d, J ϭ 8 Hz, 2 H), 8.18 (d, 2 H,
J1 ϭ 2.5, J2 ϭ 9 Hz), 8.04 (d, J ϭ 8 Hz, 2 H), 7.82 (t, J ϭ 8 Hz, 2
H), 7.70 (t, J ϭ 8 Hz, 2 H) ppm.
Experimental Section
Materials: All reagents and solvents were purchased commercially
and used without further purification unless otherwise noted. Solu-
tions of calf thymus DNA in 50 m NaCl/5 m Tris-HCl (pH 7.2)
gave a ratio of UV absorbance at 260 and 280 nm of 1.8Ϫ1.9:1,
indicating that the DNA was sufficiently free of protein.[19] The
DNA concentration per nucleotide was determined by electronic
absorption spectroscopy using the molar absorption coefficient
2,2Ј-Bis(5,6-diphenyl-1,2,4-triazin-3-yl)-4,4Ј-bipyridine (bdptb):
Α
mixture of bahmb (0.27 g, 1.0 mmol), benzil (0.4 g, 1.9 mmol), and
ethanol (40 cm3) was refluxed with stirring for 4 h. The resulting
(6600 Ϫ1·cmϪ1) at 260 nm.[20] Doubly distilled water was used to yellow precipitate was collected by filtration while hot, washed with
prepare buffers.
ethanol (3ϫ5 mL), then dried at 50 °C in vacuo. Yield: 75%.
C40H26N8 (618.7): calcd. C 77.6, H 4.2, N 18.1; found C 78.0, H
3.9, N 18.2. FAB-MS: m/z ϭ 619 (C40H26N8 requires 618). 1H
NMR (CDCl3): 9.13 (d, J ϭ 2.5 Hz, 2 H), 9.11 (d, 2 H, J ϭ 5 Hz),
7.9 (dd, 2 H, J1 ϭ 2, J2 ϭ5 Hz), 7.72 (dd, 4 H, J1 ϭ 1, J2 ϭ 8.5 Hz),
7.66 (dd, 4 H, J1 ϭ 1, J2 ϭ 8 Hz), 7.47 (t, J ϭ 8 Hz, 4 H), 7.41 (t,
J ϭ 8 Hz, 4 H), 7.39 (t, J ϭ 7 Hz, 4 H) ppm.
Physical Measurements: Microanalysis (C, H, and N) was carried
out with a PerkinϪElmer 240Q elemental analyzer. Fast atom
bombardment mass spectra were recorded on a VG ZAB-HS spec-
trometer using 3-nitrobenzyl alcohol as the matrix. Electrospray
mass spectra were recorded on an LCQ system (Finnigan MAT,
USA) using methanol as the mobile phase. The spray voltage, tube
lens offset, capillary voltage and capillary temperature were set at
4.50 kV, 30.00 V, 23.00 V and 200 °C, respectively, and the quoted
m/z values are for the major peak in the isotope distribution. 1H
NMR spectra were recorded on a Varian-500 spectrometer. All
chemical shifts are relative to tetramethylsilane (TMS). UV/Vis
spectra were recorded on a Shimadzu UV-3101PC or Agilent 8453
spectrophotometer. Emission spectra were recorded at room tem-
perature on a Shimadzu RF-5000 luminescence spectrometer.
[Ru(bpy)2(btb)Ru(bpy)2](ClO4)4
(1):
cis-[Ru(bpy)2Cl2]·2H2O
(1 mmol, 0.432 g), btb (0.5 mmol, 0.157 g) and ethylene glycol (20
cm3) were refluxed under argon for 6 h. The solution was cooled
to room temperature, and H2O (50 cm3) was added. After filtration,
a dark red precipitate was obtained by dropwise addition of
aqueous NaClO4 solution. The product was purified by column
chromatography on alumina using acetonitrile/ethanol, 2:1
(v/v) as eluent and then dried in vacuo. Yield: 66%.
C56H42N16Cl4O16Ru2·2H2O (1570.0): calcd. C 42.7, H 2.9, N
14.2%; found C 42.3, H 3.3, N 14.1%. ES-MS [CH3OH, m/z]: 670.6
Viscosity measurements were carried out using an Ubbelodhe vis-
cometer maintained at a constant temperature of 28.0 Ϯ 0.1 °C in
a thermostatted water bath. DNA samples of approximately 200
base pairs average length were prepared by sonication in order to
minimize complexities arising from DNA flexibility.[21] Flow time
was measured with a digital stopwatch. Each sample was measured
three times and an average flow time was calculated. Data are pre-
sented as (η/η°)1/3 versus binding ratio,[22] where η is the viscosity
of DNA in the presence of complex and η0 is the viscosity of
DNA alone.
1
[M Ϫ 2ClO4]2ϩ, 413.4 [M Ϫ 3ClO4]3ϩ, 285.6 [M Ϫ 4ClO4]4ϩ. H
NMR ([D6]DMSO): δ ϭ 9.33 (d, J ϭ 6 Hz, 2 H), 9.18 (s, J ϭ 6 Hz,
2 H), 9.16 (d, J ϭ 6 Hz, 2 H), 8.91 (d, J ϭ 10.5 Hz, 2 H), 8.88 (d,
J ϭ 7.5 Hz, 2 H), 8.85 (d, J ϭ 12.5 Hz, 2 H), 8.81 (d, J ϭ 8 Hz, 2
H), 8.27 (t, J ϭ 8 Hz, 2 H), 8.24Ϫ8.19 (m, 6 H), 8.17 (d, J ϭ 4 Hz,
2 H), 8.12 (d, J ϭ 8 Hz, 4 H), 7.85 (d, J ϭ 8 Hz, 4 H), 7.64 (t, J ϭ
1 Hz, 4 H), 7.35 (dd, 4 H, J1 ϭ 7.5, J2 ϭ12 Hz) ppm.
[Ru(bpy)2(btapb)Ru(bpy)2](ClO4)4 (2): This complex (dark red) was
synthesized in a similar manner to that described for complex 1,
with btapb (0.5 mmol, 0.286 g) in place of btb. Yield: 65%.
C76H50Cl4N16O16Ru2·3H2O (840.0): calcd. C 49.6, H 3.1, N 12.2;
found C 50.0, H 2.9, N 12.4. ES-MS [CH3OH, m/z]: 793.4 [M Ϫ
Equilibrium dialyses were conducted at room temperature with
5 mL of CT-DNA (1.0 m) sealed in a dialysis bag and 10 mL of
the dinuclear rac complexes (10 µM) outside the bag. The solution
containing the dialysis bag was stirred for 48 h.
1
2ClO4]2ϩ, 496.5 [M Ϫ 3ClO4]3ϩ, 347.7 [M Ϫ 4ClO4]4ϩ. H NMR
Syntheses of Complexes
([D6]DMSO): δ ϭ 9.31 (s, 2 H), 8.98 (d, J ϭ 8.5 Hz, 2 H), 8.93 (d,
J ϭ 8.5 Hz, 2 H), 8.87 (d, J ϭ 7.5 Hz, 2 H), 8.83 (d, J ϭ 8.5 Hz,
2 H), 8.75 (d, J ϭ 7 Hz, 2 H), 8.59 (d, J ϭ 8.5 Hz, 2 H), 8.52 (d,
J ϭ 8.5 Hz, 2 H), 8.33Ϫ8.27 (m, 8 H), 8.19 (dd, 6 H, J1 ϭ 7.5,
J2 ϭ 19.5 Hz), 8.14 (t, J ϭ 8 Hz, 2 H), 8.00 (dd, 4 H, J1 ϭ 6.5,
J2 ϭ14 Hz), 7.94 (t, J ϭ 5 Hz, 4 H), 7.82 (d, J ϭ 5 Hz, 2 H), 7.70
(t, J ϭ 7 Hz, 2 H), 7.64 (t, J ϭ 7 Hz, 2 H), 7.56 (dd, 2 H, J ϭ
7 Hz), 7.46 (dd, 2 H, J1 ϭ 6, J2 ϭ 11.5 Hz) ppm.
2,2Ј-Bis[amino(hydrazono)methyl]-4,4Ј-bipyridine (bahmb),[16] cis-
Ru(bpy)2Cl2 were prepared as described previously.
[23]
2,2Ј-Bis(1,2,4-triazin-3-yl)-4,4Ј-bipyridine (btb):
Α mixture of
bahmb (0.27 g, 1 mmol), 30% aqueous glyoxal (5 mL), and ethanol
(20 mL) was refluxed with stirring for 2 h. After cooling to room
temperature, the yellow precipitate was collected by filtration,
washed with ethanol (3ϫ5 cm3), then dried at 50 °C in vacuo.
Yield: 78%. C16H10N8 (314.3): calcd. C 61.1, H 3.2, N 35.7; found
C 59.8, H 2.9, N 36.2. FAB-MS: m/z ϭ 315 (C16H10N8 requires
314). 1H NMR ([D6]DMSO): 9.55 (d, J ϭ 2.5 Hz, 2 H), 9.08 (d,
J ϭ 2.5 Hz, 2 H), 9.03 (dd, 2 H, J ϭ 2.5, J1 ϭ 1, J2 ϭ 5.5 Hz),
8.90 (dd, J1 ϭ 0.5, J2 ϭ 1.5 Hz, 2 H), 8.19 (s, 2 H) ppm.
[Ru(bpy)2(bdptb)Ru(bpy)2](ClO4)4 (3): This complex (dark red) was
synthesized in a similar manner to that described for complex 1,
with bdptb (0.5 mmol, 0.307 g) in place of btb. Yield: 68%.
C80H58Cl4N16O16Ru2·H2O (1856.1): calcd. C 51.6, H 3.3, N 12.0%;
found C 51.8, H 3.6, N 12.3%. ES-MS [CH3OH, m/z]: 821.6 [M Ϫ
2,2Ј-Bis(1,2,4-triazino[5,6-f]acenaphthylen-3-yl)-4,4Ј-bipyridine 2ClO4]2ϩ, 516 [M Ϫ 3ClO4]3ϩ, 361.7 [M Ϫ 4ClO4]4ϩ
.
1H NMR
(btapb): Α mixture of bahmb (0.27 g, 1 mmol), acenaphthenequi- ([D6]DMSO): δ ϭ 9.17 (s, J ϭ 2 Hz, 2 H), 8.93 (d, J ϭ 8 Hz, 2 H),
none (0.346 g, 1.9 mmol) and ethanol (40 mL) was refluxed with
stirring for 4 h. The resulting yellow precipitate was collected by
filtration while hot, washed with ethanol (3ϫ5 mL), then dried at
50 °C in vacuo. Yield: 72%. C36H18N8 (562.6): calcd. C 76.9, H
8.88 (d, J ϭ 8 Hz, 2 H), 8.78 (t, J ϭ 8 Hz, 4 H), 8.29 (dd, 6 H,
J1 ϭ 7.5, J2 ϭ 9 Hz), 8.14 (dd, 2 H, J1 ϭ 1, J2 ϭ 5.5 Hz), 7.94 (t,
J ϭ 9 Hz, 2 H), 7.88 (d, J ϭ 5.5 Hz, 2 H), 7.75 (t, J ϭ 5.5 Hz, 6
H), 7.67 (t, J ϭ 5.5 Hz, 2 H), 7.60Ϫ7.52 (m, 8 H), 7.48Ϫ7.40 (m,
3.2, N 19.9; found C 77.3, H 3.6, N 20.2. FAB-MS: m/z ϭ 564 6 H), 7.11 (d, J ϭ 7.5 Hz, 4 H) ppm.
Eur. J. Inorg. Chem. 2004, 2277Ϫ2282
2004 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim
2281