Organic Process Research & Development 2004, 8, 920−924
“One-Pot” Preparation of N-Carbamate Protected Amino Acids via the Azide
Luis J. Cruz,† Natalia G. Beteta,† Ariel Ewenson,‡ and Fernando Albericio*,†,§
Barcelona Biomedical Research Institute, Barcelona Science Park, UniVersity of Barcelona, 08028-Barcelona, Spain,
Luxembourg Industries Ltd., 27 Hamered Street, Tel AViV 61000, Israel, and Department of Organic Chemistry,
UniVersity of Barcelona, 08028-Barcelona, Spain
Abstract:
to Boc chemistry for the synthesis of peptides. However,
their attachment through powerful chloroformate reagents
under Schotten-Baumann conditions can lead to the forma-
tion of protected dipeptides as side products.9 In most cases
the identified protected dipeptide impurities for Fmoc
represent 1-5% of the total. As an example, even when the
relatively hindered Alloc-Val-OH was prepared, 14% of the
corresponding dipeptide was obtained.8 This high incidence
of protected dipeptide can lead to the insertion of an extra
amino acid in the final peptide synthesis, which cannot be
tolerated for use in therapeutic applications for some kinds
of drug. Several approaches based on the use of different
activated formates have been proposed to minimize this
problematic side reaction. For instance, azides,9-11 mixed
carbonates such as the succinimidyl,12-15 the 1,2,2,2-tetra-
chloroethyl,16,17 and the 5-norbornene-2,3-dicarboximido,18
and the symmetrical pyrocarbonates.19 Although, the suc-
cinimidyl carbonate is recognized as the method of choice,
it is not practical when protected amino acids are prepared,
because the N-hydroxysuccinimide formed can contaminate
the final product. Alternatively, the Bolin method, which
involves the in situ preparation of the trimethylsilyl amino
acid derivatives and their subsequent reaction with the
chloroformate, is tedious and impractical for large scale.20
This paper describes a new protocol for preparing Fmoc
and Alloc amino acids using sodium azide as reagent and
free amino acids. The syntheses of N-protected amino acids
are carried out in one pot removing the byproducts during
the workup, so it is not necessary to use a crystallization
step. Moreover, it was demonstrated that the amounts of the
undesired protected dipeptide produced by the present
A convenient and efficient method for the preparation of
fluorenylmethyloxycarbonyl (Fmoc) and allyloxycarbonyl (Al-
loc) amino acids is proposed. This method is particularly
attractive due to the fact that the reaction sequence Fmoc/Alloc-
chloride to Fmoc/Alloc-azide to Fmoc/Alloc-amino acid can
readily be carried out in one pot. A further advantage is the
minimization of byproducts, which are easily removed during
the workup. Most important, this strategy minimizes the
formation of dipeptides that are difficult to remove by crystal-
lization. Thus, Fmoc and Alloc amino acids are obtained in high
yield (60-90%) and purity as evidenced by thin-layer chro-
matography, reversed-phase high-performance liquid chroma-
tography, mass spectrometry, and nuclear magnetic resonance.1
Introduction
Nowadays synthetic peptides such as T20,2 R15K (V3
peptide from HIV-1 IIIB gp120),3 Somatostatin,4 and Oxy-
tocin5 are widely recognized as potential pharmaceutical
agents.6 The ultimate purity of any peptide, whether prepared
by solution or solid-phase methodology, depends heavily on
the purity of the initial starting materials. The most com-
monly utilized amino acid derivatives for both solution and
solid-phase procedures are the N-urethane blocked amino
acids, in particular Z (benzyloxycarbonyl), Boc (tert-bu-
toxycarbonyl), Fmoc (fluorenylmethyloxycarbonyl), and Al-
loc (allyloxycarbonyl).7,8 Therefore, there is a growing
demand for the preparation of those with a high level of
purity.
In the last two decades, the use of the Fmoc and Alloc
groups has evidenced an important increase as an alternative
(9) Tessier, M.; Albericio, F.; Pedroso, E.; Grandas, A.; Eritja, R.; Giralt, E.;
Granier, C.; Van- Rietschoten, J. Int. J. Pept. Protein Res. 1983, 22, 125.
(10) Garcia, J.; Mart´ınez-Teipel, B.; Nicola´s, E.; Michelotti, E. L.; Albericio, F.
Lett. Peptide Sci., in press.
(11) Although the existence of this side reaction was not mentioned, Fmoc-N3
was already proposed as an alternative to the chloroformate in the seminal
papers of Carpino and Han (Carpino, L. A.; Han, G. Y. J. Am. Chem. Soc.
1970, 92, 5748. Carpino, L. A.; Han, G. Y. J. Org. Chem. 1972, 37, 3404).
(12) Sigler, G. F.; Fuller, W. D.; Chaturvedi, N. C.; Goodman, M.; Verlander,
M. Biopolymers 1983, 22, 2157.
* Corresponding author. Present address: Fernando Albericio. Barcelona
Biomedical Research Institute, Barcelona Science Park, University of Barcelona,
† Barcelona Biomedical Research Institute, University of Barcelona.
‡ Luxembourg Industries Ltd.
§ Department of Organic Chemistry, University of Barcelona.
(1) Wade, J. D. In Solid-Phase Synthesis. A Practical Guide; Kates, S. A.,
Albericio, F., Eds.; Marcel Dekker: New York, 2000; pp 103-128.
(2) Kannan, N. P.; Hengguang, L.; Alonso, H.; Haijing, A.; Lai-Xi, W. Org.
Biomol. Chem. 2004, 2, 660.
(13) Lapatsanis, L., Milias, G., Froussios, K.; Kolovos, M. Synthesis 1983, 671.
(14) Ten K. P.; Van Dijk, B. G.; Peeters, J. M.; Raaben, B. J.; Adams, P. J.;
Tesser, G. I. Int. J. Pept. Protein Res. 1986, 27, 398.
(3) Nehete, P. N.; Vela, E. M.; Hossain, M. M.; Sarkar, A. K.; Yahi, N.; Fantini,
J.; Sastry, K. J. AntiViral Res. 2002, 56, 233.
(4) Licha, K.; Hessenius, C.; Becker, A.; Henklein, P.; Bauer, M.; Wisniewski,
S.; Wiedenmann, B.; Semmler, W. Biooconj. Chem. 2001, 12, 44.
(5) Du V. V.; Ressler, C.; Swan, J. M.; Roberts, C. W.; Katsoyannis, P. G.;
Gordon, S. J. Am. Chem. Soc. 1953, 75, 4879.
(6) Bruckdorfer, T.; Marder, O.; Albericio, F. Curr. Pharm. Biotechnol. 2004,
5, 29.
(7) Lloyd-Williams, P.; Albericio, F.; Giralt, E. CRC, Boca Raton (FL), 1997.
(8) Albericio, F. Biopolymers (Peptide Science) 2000, 55, 123.
(15) Milton, R. C. de L.; Becker, E.; Milton, S. C. F.; Baxter, J. E. J.; Elsworth,
J. F. Int. J. Pept. Protein Res. 1987, 30, 431.
(16) Barcelo, G.; Sente´, J.-P.; Sennyey, G. J. Org. Chem. 1985, 50, 3953.
(17) Barcelo, G.; Sente´ J.-P.; Sennyey, G.; Bensoam, J.; Loffet, A. Synthesis
1986, 627.
(18) Henklein, P.; Heyne, H,-V.; Halatsch, W. R.; Niedrich, H. Synthesis 1987,
166.
(19) Sennyey, G.; Barcelo, G.; Sente´, J. P. Tetrahedron Lett. 1986, 44, 5375.
(20) Bolin, D. R.; Sytwu, I. I.; Humiec, F.; Meienhofer, J. Int. J. Pept. Protein
Res. 1989, 33, 353.
920
•
Vol. 8, No. 6, 2004 / Organic Process Research & Development
10.1021/op049917z CCC: $27.50 © 2004 American Chemical Society
Published on Web 09/18/2004