284
F. Yang et al. / Journal of Molecular Structure 892 (2008) 283–288
a heating rate of 10 °C minꢁ1. Fluorescence spectra were performed
on a Hitachi F-4500 fluorescence spectrophotometer at room
temperature.
two nitrogen atoms from one phen, and one water molecule into
a distorted one-cap triangular-prism geometry. The Cd–O bonds
are in the range of 2.208–2.585 Å, Cd–N bonds range from
2.374(4) to 2.468(4) Å, which drop into the normal scope of Cd–
N and Cd–O bond lengths [16]. The poda2ꢁ ligand adopts che-
late–bidentate coordination fashion to connect the adjacent CdII
atoms into 1D zigzag chain. Interestingly, the 1D chains are inter-
linked to form a 1D double chain via strong intermolecular hydro-
gen bonds between the coordinated water molecules on one chain
and the poda2ꢁ acceptors on the other chain (O(9)–
Hꢀ ꢀ ꢀO(3) = 2.730 Å, 178.49°).
2.2. Synthesis of [Cd2(poda)2(phen)3(H2O)]nꢀnEtOHꢀ3nH2O (1)
A solution of H2poda (0.0194 g, 0.1 mmol) and phen (0.0198 g,
0.2 mmol) in EtOH/H2O (40 mL, 1:1) adjusted to pH 7 by addition
of aqueous NaOH solution (1.0 mmol Lꢁ1), was added to the solu-
tion of Cd(NO3)2ꢀ4H2O (0.0308 g, 0.1 mmol) in H2O (20 mL). The
reaction mixture was stirred for ca. 10 min to give a colorless solu-
tion and filtered. After the mixture was slowly cooled to room tem-
perature, colorless block crystals of 1 were yielded. Elemental
analysis calcd. for C58H54Cd2N6O13 (%): C, 54.94; H, 4.29; N, 6.63.
Found (%): C, 54.02; H, 4.12; N, 6.05.
The most remarkable feature of 1 is the existence of unreported
mixed solvent clusters (Fig. 2a). The solvent cluster, as named four-
footed ‘‘8-shaped” mixed water–ethanol (H2O)6(C2H5OH)2 cluster,
consists of four water (O11A, O13A, O11B, and O13B) and two oxy-
gen atoms (O12A and O12B) of two ethanol molecules as the ‘‘8-
shaped” main body, as well as two water molecules (O10A and
O10B) and –CH2–CH3 groups of ethanol molecules as its four feet
(Fig. 2b). All data of these hydrogen bonds are listed in Table 2.
The distances of hydrogen bonds range from 2.651 to 2.875 Å, with
the mean value of 2.786 Å, which is slightly longer than that ob-
served in ice-like cyclic (H2O)8 clusters [17]. Although discrete
water clusters have been the subject of theoretical calculations,
and have been described in literatures [18,19], mixed solvent clus-
ters have been rarely reported before [20]. As far as we know, such
a four-footed ‘‘8-shaped” mixed water–ethanol (H2O)6(C2H5OH)2
cluster is rare example and worth to investigating further. In com-
pound 1, each mixed solvent cluster links four double chains by its
four feet to extend into 3D supramolecular framework.
2.3. Synthesis of [Zn(poda)2(bpy)(H2O)]n (2)
Compound 2 was synthesized from the reaction mixture of
H2poda (0.0194 g, 0.1 mmol) were dissolved in 2 ml of MeOH, then
the solution was added dropwise with 6 ml H2O of Zn(NO3)2
(0.0308 g, 0.1 mmol) and 2 ml MeOH of bpy (0.0156 g,0.1 mmol).
The solution was adjusted to pH 8–9 by addition of 1.0 mmol Lꢁ1
NaOH solution, then stirred, filtered, and standing in air at room
temperature for 20 days, some colorless block crystals of com-
pound
2
were obtained. Elemental analysis calcd. for
C20H18N2O5Zn (%): C, 55.64; H, 4.20; N, 6.49. Found (%): C, 54.93;
H, 4.01; N, 5.69.
2.4. Synthesis of [Zn(Hpoda)2(bpy)] (3)
In compound 2, the Zn(II) ion lies in a distorted octahedron
coordination environment. The coordinated six atoms are three
carboxylic O atoms from two poda2ꢁ ligands, one O atom from
one water molecule and two N atoms of a bpy ligand, respectively
(Fig. 3). The bond lengths of Zn–O are in the range of 2.2086–
2.3591 Å, and those of Zn–N within 2.3129–2.3212 Å, which accord
with the Zn–O and Zn–N bond lengths reported [21]. Just for the
flexible structure of the poda2ꢁ ligand, the adjacent Zn(II) ions
are linked into an infinite 1D zigzag chain by the poda2ꢁ anions
in a bis(chelate–monodentate) mode (Fig. 4). The chelating bpy li-
gands coordinated to Zn(II) ions at the opposite side to the phenyl
The synthesis procedure was similar to that described above
compound 2 except using pH 7 instead of pH 8–9, and colorless
block crystals of 3 were yielded. Elemental analysis calcd. for
C30H26N2O8Zn (%): C, 59.27; H, 4.31; N, 4.61. Found (%): C, 58.76;
H, 4.12; N, 3.95.
2.5. Determination of crystal structure
Single-crystal X-ray data were collected on a Bruker SMART
APEX II CCD diffractometer equipped with graphite monochroma-
tized Mo Ka (k = 0.071073 nm) by Crystal clear software. Empirical
of the poda2ꢁ ligand of 1D zigzag chain alternately. Strong
p–p
stacking interactions (the face to face distance is 3.493 Å) existing
between the immediate bipy ligands and phenyl rings of poda2ꢁ li-
gands from adjacent chains, result in a dense zipper-like 2D layer
in ac plane (Fig. 5). Then, these 2D layers stack along b axis accord-
ing to ABAB manner.
absorption corrections were applied in the case. All calculations
were conducted using SHELXS-97 and SHELXL-97 programs
[13,14], while the structures were solved by the direct methods.
All the non-hydrogen atoms were located from the trial structure
and then refined anisotropically with SHELXTL via full-matrix
least-square procedure [15]. Hydrogen atoms were located from
difference Fourier maps. The crystallographic data of the com-
pounds are summarized in Table 1.
The coordination modes of an organic ligand containing car-
boxyl group are affected by pH value of a reaction system. In order
to verify it, we altered pH value of system of compound 2 from 8–9
to 7 and obtained compound 3. For 3, the Zn(II) ion is in a six-coor-
dinated slight distorted triangular-prism environment, in which
four oxygen atoms O1, O2, O1A, and O2A from two Hpodaꢁ ligands,
and two nitrogen atoms N1 and N1A from a bpy ligand (Fig. 6). And
O1, O2A, N1A, and O1A, O2, N1 form two planes of
triangular-prism. The Zn–O bond lengths are in the range of
2.2568–2.3515 Å, which are similar to those in compound 2. The
Zn–N distances (2.2530 Å) are slightly shorter than that in com-
pound 2. The Hpodaꢁ ligand adopts the chelate coordinated mode
and holds back the formation of 1D chain.
A notable feature of compound 3 is four neighboring Zn(II) ions
via four C12–Hꢀ ꢀ ꢀO2 hydrogen bonds (3.453 Å, 115.42°) to form 2D
[4,4] supramolecular network parallel to the ab plane (Fig. 7). And
strong hydrogen bonds between the protonized carbonyl oxygen
atoms from two different dangling ligands (O4–Hꢀ ꢀ ꢀO1 2.667 Å)
make 2D networks into 3D 6-connected supramolecular edifice
[22]. From the point of view of topology, 3D framework of 3 is a
3. Results and discussion
3.1. Crystal structures of compounds 1–3
X-ray single-crystal diffraction analysis reveals compound 1 has
1D zigzag structure based on dinuclear metallic units containing
solvent clusters. In the asymmetric unit of 1, there are two CdII
ions, two poda2ꢁ ligand, three phen groups, one water molecule,
as well as three lattice water molecules, and one ethanol molecule
(Fig. 1). Cd1 ion is located in a six-coordinated anti-triangular-
prism geometry with four nitrogen atoms from two chelated phen
ligands, two oxygen atoms from two poda2ꢁ groups (plane 1: N4,
N2, O5 and plane 2: O1, N1, N3). Different from Cd1, Cd2 ion is se-
ven-coordinated to four oxygen atoms from two poda2ꢁ groups,